RNA–Protein interactions for RNA: ENST00000490990.1

RGPD6-211, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-211ENST00000490990 A0A1B0GVY2 172 aa14.47□□□□□ -0.09
RGPD6-211ENST00000490990 FBLL1A6NHQ2 334 aaKnown RBP14.47□□□□□ -0.09
RGPD6-211ENST00000490990 PRSS29PA6NIE9 313 aa14.47□□□□□ -0.09
RGPD6-211ENST00000490990 UBE2G2P60604 165 aa14.47□□□□□ -0.09
RGPD6-211ENST00000490990 FHL2Q14192 279 aa14.47□□□□□ -0.09
RGPD6-211ENST00000490990 KCNS1Q96KK3 526 aa14.47□□□□□ -0.09
RGPD6-211ENST00000490990 SDF2L1Q9HCN8 221 aa14.47□□□□□ -0.09
RGPD6-211ENST00000490990 MAP1LC3B2A6NCE7 125 aa14.46□□□□□ -0.09
RGPD6-211ENST00000490990 SLAQ13239 276 aa14.46□□□□□ -0.09
RGPD6-211ENST00000490990 C1orf134Q5TEV5 83 aa14.46□□□□□ -0.09
RGPD6-211ENST00000490990 PRNTQ86SH4 94 aa14.46□□□□□ -0.09
RGPD6-211ENST00000490990 UPK3BQ9BT76 320 aa14.46□□□□□ -0.09
RGPD6-211ENST00000490990 MAP1LC3BQ9GZQ8 125 aa14.46□□□□□ -0.09
RGPD6-211ENST00000490990 PRO0255Q9UI72 69 aa14.46□□□□□ -0.09
RGPD6-211ENST00000490990 FAM74A7A6NL05 159 aa14.45□□□□□ -0.1
RGPD6-211ENST00000490990 PAX4O43316 350 aa14.45□□□□□ -0.1
RGPD6-211ENST00000490990 GCGP01275 180 aa14.45□□□□□ -0.1
RGPD6-211ENST00000490990 CRYBA4P53673 196 aa14.45□□□□□ -0.1
RGPD6-211ENST00000490990 SOHLH1Q5JUK2 328 aa14.45□□□□□ -0.1
RGPD6-211ENST00000490990 LINC00479Q96M42 142 aa14.45□□□□□ -0.1
RGPD6-211ENST00000490990 NKX6-2Q9C056 277 aaPredicted RBP14.45□□□□□ -0.1
RGPD6-211ENST00000490990 Q9H8V8 135 aa14.45□□□□□ -0.1
RGPD6-211ENST00000490990 C11orf21Q9P2W6 132 aa14.45□□□□□ -0.1
RGPD6-211ENST00000490990 MRPS16Q9Y3D3 137 aaKnown RBP14.45□□□□□ -0.1
RGPD6-211ENST00000490990 A0A0D9SG52 128 aa14.44□□□□□ -0.1
RGPD6-211ENST00000490990 M0R2P5 195 aa14.44□□□□□ -0.1
RGPD6-211ENST00000490990 IFNA7P01567 189 aa14.44□□□□□ -0.1
RGPD6-211ENST00000490990 PFN1P07737 140 aaKnown RBP14.44□□□□□ -0.1
RGPD6-211ENST00000490990 SFTA3P0C7M3 94 aa14.44□□□□□ -0.1
RGPD6-211ENST00000490990 SMUG1Q53HV7 270 aa14.44□□□□□ -0.1
RGPD6-211ENST00000490990 SAPCD1Q5SSQ6 148 aa14.44□□□□□ -0.1
RGPD6-211ENST00000490990 ZNF479Q96JC4 524 aa14.44□□□□□ -0.1
RGPD6-211ENST00000490990 HHLA3Q9XRX5 114 aa14.44□□□□□ -0.1
RGPD6-211ENST00000490990 TRAV34A0A0B4J273 112 aa14.43□□□□□ -0.1
RGPD6-211ENST00000490990 PEX7O00628 323 aa14.43□□□□□ -0.1
RGPD6-211ENST00000490990 BCL2L11O43521 198 aa14.43□□□□□ -0.1
RGPD6-211ENST00000490990 SEC11BP0C7V7 166 aa14.43□□□□□ -0.1
RGPD6-211ENST00000490990 FHITP49789 147 aa14.43□□□□□ -0.1
RGPD6-211ENST00000490990 ZFP69Q49AA0 526 aa14.43□□□□□ -0.1
RGPD6-211ENST00000490990 ICOSQ9Y6W8 199 aa14.43□□□□□ -0.1
RGPD6-211ENST00000490990 TRAV4A0A0B4J268 109 aa14.42□□□□□ -0.1
RGPD6-211ENST00000490990 TRGV4A0A0C4DH28 118 aa14.42□□□□□ -0.1
RGPD6-211ENST00000490990 HIST1H2BAQ96A08 127 aa14.42□□□□□ -0.1
RGPD6-211ENST00000490990 KANTRA0A1W2PQU2 76 aa14.41□□□□□ -0.1
RGPD6-211ENST00000490990 PPT1P50897 306 aa14.41□□□□□ -0.1
RGPD6-211ENST00000490990 STOML3Q8TAV4 291 aa14.41□□□□□ -0.1
RGPD6-211ENST00000490990 ZNF471Q9BX82 626 aaPredicted RBP14.41□□□□□ -0.1
RGPD6-211ENST00000490990 ARL2-SNX15V9GYD0 113 aa14.41□□□□□ -0.1
RGPD6-211ENST00000490990 PKD1P98161 4303 aa14.41□□□□□ -0.1
RGPD6-211ENST00000490990 PKHD1P08F94 4074 aa14.41□□□□□ -0.1
RGPD6-211ENST00000490990 Q86TA4 180 aa14.4□□□□□ -0.1
RGPD6-211ENST00000490990 UMAD1C9J7I0 102 aa14.39□□□□□ -0.11
RGPD6-211ENST00000490990 MRPL23Q16540 153 aaKnown RBP14.39□□□□□ -0.11
RGPD6-211ENST00000490990 C6orf223Q8N319 242 aa14.39□□□□□ -0.11
RGPD6-211ENST00000490990 OR4C5Q8NGB2 326 aa14.39□□□□□ -0.11
RGPD6-211ENST00000490990 KRTAP1-5Q9BYS1 174 aa14.39□□□□□ -0.11
RGPD6-211ENST00000490990 MBD3L1Q8WWY6 194 aa14.38□□□□□ -0.11
RGPD6-211ENST00000490990 C9orf85Q96MD7 179 aa14.38□□□□□ -0.11
RGPD6-211ENST00000490990 EIF5AP63241 154 aaKnown RBP14.37□□□□□ -0.11
RGPD6-211ENST00000490990 TTC32Q5I0X7 151 aa14.37□□□□□ -0.11
RGPD6-211ENST00000490990 TMUB2Q71RG4 321 aa14.37□□□□□ -0.11
RGPD6-211ENST00000490990 FAM213BQ8TBF2 198 aa14.37□□□□□ -0.11
RGPD6-211ENST00000490990 TCEAL7Q9BRU2 100 aa14.37□□□□□ -0.11
RGPD6-211ENST00000490990 IGKV3D-20A0A0C4DH25 116 aa14.36□□□□□ -0.11
RGPD6-211ENST00000490990 A0A1W2PPQ1 181 aa14.36□□□□□ -0.11
RGPD6-211ENST00000490990 K7EQD1 137 aa14.36□□□□□ -0.11
RGPD6-211ENST00000490990 RNASE3P12724 160 aaKnown RBP14.36□□□□□ -0.11
RGPD6-211ENST00000490990 CST9LP1Q5W188 147 aa14.36□□□□□ -0.11
RGPD6-211ENST00000490990 DPPA3Q6W0C5 159 aa14.36□□□□□ -0.11
RGPD6-211ENST00000490990 SFT2D1Q8WV19 159 aa14.36□□□□□ -0.11
RGPD6-211ENST00000490990 FABP5P3A8MUU1 101 aa14.35□□□□□ -0.11
RGPD6-211ENST00000490990 C9JCJ5 164 aa14.35□□□□□ -0.11
RGPD6-211ENST00000490990 PFDN1O60925 122 aa14.35□□□□□ -0.11
RGPD6-211ENST00000490990 ORM1P02763 201 aa14.35□□□□□ -0.11
RGPD6-211ENST00000490990 ZNF876PQ49A33 203 aa14.35□□□□□ -0.11
RGPD6-211ENST00000490990 LYPD5Q6UWN5 251 aa14.35□□□□□ -0.11
RGPD6-211ENST00000490990 NEGR1Q7Z3B1 354 aa14.35□□□□□ -0.11
RGPD6-211ENST00000490990 COX8CQ7Z4L0 72 aa14.35□□□□□ -0.11
RGPD6-211ENST00000490990 PTH2Q96A98 100 aa14.35□□□□□ -0.11
RGPD6-211ENST00000490990 FMC1Q96HJ9 113 aa14.35□□□□□ -0.11
RGPD6-211ENST00000490990 ZFP30Q9Y2G7 519 aa14.35□□□□□ -0.11
RGPD6-211ENST00000490990 DYNC1H1Q14204 4646 aaKnown RBP14.34□□□□□ -0.11
RGPD6-211ENST00000490990 DNAH11Q96DT5 4516 aa14.34□□□□□ -0.11
RGPD6-211ENST00000490990 PAGE4O60829 102 aa14.34□□□□□ -0.11
RGPD6-211ENST00000490990 TPT1P13693 172 aaKnown RBP14.34□□□□□ -0.11
RGPD6-211ENST00000490990 GYPEP15421 78 aa14.34□□□□□ -0.11
RGPD6-211ENST00000490990 ZC2HC1AQ96GY0 325 aa14.34□□□□□ -0.11
RGPD6-211ENST00000490990 HERC2O95714 4834 aa14.34□□□□□ -0.11
RGPD6-211ENST00000490990 KIAA1109Q2LD37 5005 aa14.33□□□□□ -0.12
RGPD6-211ENST00000490990 TRBV6-1A0A0K0K1D8 114 aa14.33□□□□□ -0.12
RGPD6-211ENST00000490990 PGPEP1LA6NFU8 196 aa14.33□□□□□ -0.12
RGPD6-211ENST00000490990 RS1O15537 224 aa14.33□□□□□ -0.12
RGPD6-211ENST00000490990 NXPH4O95158 308 aa14.33□□□□□ -0.12
RGPD6-211ENST00000490990 GATA1P15976 413 aaPredicted RBP14.33□□□□□ -0.12
RGPD6-211ENST00000490990 SRIP30626 198 aa14.33□□□□□ -0.12
RGPD6-211ENST00000490990 CRIP1P50238 77 aa14.33□□□□□ -0.12
RGPD6-211ENST00000490990 UBE2G1P62253 170 aa14.33□□□□□ -0.12
RGPD6-211ENST00000490990 TNP2Q05952 138 aa14.33□□□□□ -0.12
RGPD6-211ENST00000490990 TCTE3Q8IZS6 198 aa14.33□□□□□ -0.12
RGPD6-211ENST00000490990 PCNPQ8WW12 178 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms