RNA–Protein interactions for RNA: ENST00000490883.1

SEMA3A-207, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 237 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-207ENST00000490883 ZNF56Q15929 161 aa0.34□□□□□ -2.36
SEMA3A-207ENST00000490883 OTOSQ8NHW6 89 aa0.34□□□□□ -2.36
SEMA3A-207ENST00000490883 SKA2Q8WVK7 121 aaPredicted RBP0.34□□□□□ -2.36
SEMA3A-207ENST00000490883 MDN1Q9NU22 5596 aa0.33□□□□□ -2.36
SEMA3A-207ENST00000490883 IGHV1-24A0A0C4DH33 117 aa0.33□□□□□ -2.36
SEMA3A-207ENST00000490883 A0A0G2JMM0 328 aa0.33□□□□□ -2.36
SEMA3A-207ENST00000490883 TPST1O60507 370 aa0.33□□□□□ -2.36
SEMA3A-207ENST00000490883 IGKCP01834 107 aa0.33□□□□□ -2.36
SEMA3A-207ENST00000490883 Q5XG85 94 aa0.33□□□□□ -2.36
SEMA3A-207ENST00000490883 IDO2Q6ZQW0 420 aa0.33□□□□□ -2.36
SEMA3A-207ENST00000490883 DMAC1Q96GE9 116 aa0.33□□□□□ -2.36
SEMA3A-207ENST00000490883 AFDNP55196 1824 aaKnown RBP0.33□□□□□ -2.36
SEMA3A-207ENST00000490883 MUC5ACP98088 5654 aa0.33□□□□□ -2.36
SEMA3A-207ENST00000490883 TSTD3H0UI37 97 aa0.32□□□□□ -2.36
SEMA3A-207ENST00000490883 TCRAP04437 139 aa0.32□□□□□ -2.36
SEMA3A-207ENST00000490883 GINS2Q9Y248 185 aa0.32□□□□□ -2.36
SEMA3A-207ENST00000490883 BCORL1Q5H9F3 1711 aa0.32□□□□□ -2.36
SEMA3A-207ENST00000490883 WDR97A6NE52 1622 aa0.31□□□□□ -2.36
SEMA3A-207ENST00000490883 ABCA1O95477 2261 aa0.31□□□□□ -2.36
SEMA3A-207ENST00000490883 HELZP42694 1942 aaKnown RBP0.31□□□□□ -2.36
SEMA3A-207ENST00000490883 IL7P13232 177 aa0.31□□□□□ -2.36
SEMA3A-207ENST00000490883 B2MP61769 119 aa0.31□□□□□ -2.36
SEMA3A-207ENST00000490883 HSPB11Q9Y547 144 aa0.31□□□□□ -2.36
SEMA3A-207ENST00000490883 ABCA4P78363 2273 aa0.31□□□□□ -2.36
SEMA3A-207ENST00000490883 PTPRGP23470 1445 aa0.3□□□□□ -2.36
SEMA3A-207ENST00000490883 KIDINS220Q9ULH0 1771 aa0.3□□□□□ -2.36
SEMA3A-207ENST00000490883 H0YJX3 145 aa0.3□□□□□ -2.36
SEMA3A-207ENST00000490883 J3KT08 172 aa0.3□□□□□ -2.36
SEMA3A-207ENST00000490883 PSPHP78330 225 aa0.3□□□□□ -2.36
SEMA3A-207ENST00000490883 OR4S1Q8NGB4 309 aa0.3□□□□□ -2.36
SEMA3A-207ENST00000490883 ATG5Q9H1Y0 275 aa0.3□□□□□ -2.36
SEMA3A-207ENST00000490883 OVOS2A0A0G2JMS6 1433 aa0.3□□□□□ -2.36
SEMA3A-207ENST00000490883 FAT4Q6V0I7 4981 aa0.29□□□□□ -2.36
SEMA3A-207ENST00000490883 TRAV36DV7A0A075B6V5 113 aa0.29□□□□□ -2.36
SEMA3A-207ENST00000490883 PNMA8CA0A1B0GUJ8 204 aa0.29□□□□□ -2.36
SEMA3A-207ENST00000490883 A0A1B0GX51 115 aa0.29□□□□□ -2.36
SEMA3A-207ENST00000490883 GNG14A0A1W2PPG7 69 aa0.29□□□□□ -2.36
SEMA3A-207ENST00000490883 DPM2O94777 84 aa0.29□□□□□ -2.36
SEMA3A-207ENST00000490883 PCBD1P61457 104 aa0.29□□□□□ -2.36
SEMA3A-207ENST00000490883 OR8I2Q8N0Y5 310 aa0.29□□□□□ -2.36
SEMA3A-207ENST00000490883 METTL1Q9UBP6 276 aaKnown RBP0.29□□□□□ -2.36
SEMA3A-207ENST00000490883 CPDO75976 1380 aa0.29□□□□□ -2.36
SEMA3A-207ENST00000490883 A0A096LNT2 108 aa0.28□□□□□ -2.36
SEMA3A-207ENST00000490883 CCKP06307 115 aa0.28□□□□□ -2.36
SEMA3A-207ENST00000490883 SCTP09683 121 aa0.28□□□□□ -2.36
SEMA3A-207ENST00000490883 HIST1H1BP16401 226 aaKnown RBP0.28□□□□□ -2.36
SEMA3A-207ENST00000490883 ADCYAP1P18509 176 aa0.28□□□□□ -2.36
SEMA3A-207ENST00000490883 SDC4P31431 198 aa0.28□□□□□ -2.36
SEMA3A-207ENST00000490883 HSD17B12Q53GQ0 312 aa0.28□□□□□ -2.36
SEMA3A-207ENST00000490883 TMEM91Q6ZNR0 172 aa0.28□□□□□ -2.36
SEMA3A-207ENST00000490883 DEGS1O15121 323 aa0.27□□□□□ -2.37
SEMA3A-207ENST00000490883 KLKP1Q107X0 134 aa0.27□□□□□ -2.37
SEMA3A-207ENST00000490883 IQCJQ1A5X6 159 aa0.27□□□□□ -2.37
SEMA3A-207ENST00000490883 TSKUQ8WUA8 353 aa0.27□□□□□ -2.37
SEMA3A-207ENST00000490883 ARHGAP31Q2M1Z3 1444 aa0.27□□□□□ -2.37
SEMA3A-207ENST00000490883 ZCCHC6Q5VYS8 1495 aaKnown RBP0.27□□□□□ -2.37
SEMA3A-207ENST00000490883 ARAP1Q96P48 1450 aa0.27□□□□□ -2.37
SEMA3A-207ENST00000490883 DLEC1Q9Y238 1755 aa0.27□□□□□ -2.37
SEMA3A-207ENST00000490883 FXYD1O00168 92 aa0.26□□□□□ -2.37
SEMA3A-207ENST00000490883 TNFSF15O95150 251 aa0.26□□□□□ -2.37
SEMA3A-207ENST00000490883 MT-ND4LP03901 98 aa0.26□□□□□ -2.37
SEMA3A-207ENST00000490883 CD3DP04234 171 aa0.26□□□□□ -2.37
SEMA3A-207ENST00000490883 PAEPP09466 180 aa0.26□□□□□ -2.37
SEMA3A-207ENST00000490883 OR8B8Q15620 311 aa0.26□□□□□ -2.37
SEMA3A-207ENST00000490883 TMEM244Q5VVB8 128 aa0.26□□□□□ -2.37
SEMA3A-207ENST00000490883 DNAJC15Q9Y5T4 150 aa0.26□□□□□ -2.37
SEMA3A-207ENST00000490883 KMT2DO14686 5537 aa0.26□□□□□ -2.37
SEMA3A-207ENST00000490883 SYNE1Q8NF91 8797 aaKnown RBP0.26□□□□□ -2.37
SEMA3A-207ENST00000490883 MED13LQ71F56 2210 aa0.25□□□□□ -2.37
SEMA3A-207ENST00000490883 LRP5O75197 1615 aa0.25□□□□□ -2.37
SEMA3A-207ENST00000490883 TRBV10-1A0A0K0K1A3 114 aa0.25□□□□□ -2.37
SEMA3A-207ENST00000490883 CXorf51AA0A1B0GTR3 108 aa0.25□□□□□ -2.37
SEMA3A-207ENST00000490883 POLR2JP52435 117 aaKnown RBP0.25□□□□□ -2.37
SEMA3A-207ENST00000490883 PLGLB1Q02325 96 aa0.25□□□□□ -2.37
SEMA3A-207ENST00000490883 UNQ5815/PRO19632Q6UWF5 114 aa0.25□□□□□ -2.37
SEMA3A-207ENST00000490883 SPINK6Q6UWN8 80 aa0.25□□□□□ -2.37
SEMA3A-207ENST00000490883 TAC4Q86UU9 113 aa0.25□□□□□ -2.37
SEMA3A-207ENST00000490883 TMEM14BQ9NUH8 114 aa0.25□□□□□ -2.37
SEMA3A-207ENST00000490883 MAST4O15021 2626 aa0.25□□□□□ -2.37
SEMA3A-207ENST00000490883 TPRP12270 2363 aaKnown RBP0.25□□□□□ -2.37
SEMA3A-207ENST00000490883 A0A1B0GW64 132 aa0.24□□□□□ -2.37
SEMA3A-207ENST00000490883 C9JAW5 83 aa0.24□□□□□ -2.37
SEMA3A-207ENST00000490883 SLC25A26Q70HW3 274 aa0.24□□□□□ -2.37
SEMA3A-207ENST00000490883 SPANXA1Q9NS26 97 aa0.24□□□□□ -2.37
SEMA3A-207ENST00000490883 SPANXCQ9NY87 97 aa0.24□□□□□ -2.37
SEMA3A-207ENST00000490883 CALML5Q9NZT1 146 aa0.24□□□□□ -2.37
SEMA3A-207ENST00000490883 HIGD1AQ9Y241 93 aa0.24□□□□□ -2.37
SEMA3A-207ENST00000490883 TANC1Q9C0D5 1861 aa0.24□□□□□ -2.37
SEMA3A-207ENST00000490883 RBBP6Q7Z6E9 1792 aaKnown RBP0.24□□□□□ -2.37
SEMA3A-207ENST00000490883 BLMP54132 1417 aaPredicted RBP0.23□□□□□ -2.37
SEMA3A-207ENST00000490883 GPR98Q8WXG9 6306 aa0.23□□□□□ -2.37
SEMA3A-207ENST00000490883 OR2H2O95918 312 aa0.23□□□□□ -2.37
SEMA3A-207ENST00000490883 HLA-DRB4P13762 266 aa0.23□□□□□ -2.37
SEMA3A-207ENST00000490883 PPDPFLQ8WWR9 84 aa0.23□□□□□ -2.37
SEMA3A-207ENST00000490883 MRPL40Q9NQ50 206 aaKnown RBP0.23□□□□□ -2.37
SEMA3A-207ENST00000490883 HLA-DRB4X5D2U9 266 aa0.23□□□□□ -2.37
SEMA3A-207ENST00000490883 RREB1Q92766 1687 aa0.23□□□□□ -2.37
SEMA3A-207ENST00000490883 CACNA1HO95180 2353 aa0.23□□□□□ -2.37
SEMA3A-207ENST00000490883 CDK12Q9NYV4 1490 aaPredicted RBP0.22□□□□□ -2.37
SEMA3A-207ENST00000490883 SMIM24O75264 130 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms