RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 TREM1Q9NP99 234 aa13.43□□□□□ -0.26
SREBF1-216ENST00000490796 F6UZH7 168 aa13.42□□□□□ -0.26
SREBF1-216ENST00000490796 GNRH2O43555 120 aa13.42□□□□□ -0.26
SREBF1-216ENST00000490796 SH2D6Q7Z4S9 175 aa13.42□□□□□ -0.26
SREBF1-216ENST00000490796 WFDC10BQ8IUB3 73 aa13.42□□□□□ -0.26
SREBF1-216ENST00000490796 ARL6IP6Q8N6S5 226 aa13.42□□□□□ -0.26
SREBF1-216ENST00000490796 NHLRC2Q8NBF2 726 aa13.42□□□□□ -0.26
SREBF1-216ENST00000490796 MSRB1Q9NZV6 116 aa13.42□□□□□ -0.26
SREBF1-216ENST00000490796 RAB2AP61019 212 aa13.41□□□□□ -0.26
SREBF1-216ENST00000490796 OR10G9Q8NGN4 311 aa13.41□□□□□ -0.26
SREBF1-216ENST00000490796 OR10G7Q8NGN6 311 aa13.41□□□□□ -0.26
SREBF1-216ENST00000490796 WFDC1Q9HC57 220 aa13.41□□□□□ -0.26
SREBF1-216ENST00000490796 IGHV3-16A0A0C4DH30 117 aa13.4□□□□□ -0.26
SREBF1-216ENST00000490796 HMGB3O15347 200 aaKnown RBP13.4□□□□□ -0.26
SREBF1-216ENST00000490796 PPT1P50897 306 aa13.4□□□□□ -0.26
SREBF1-216ENST00000490796 C10orf126Q8N4M7 172 aa13.4□□□□□ -0.26
SREBF1-216ENST00000490796 ASB13Q8WXK3 278 aa13.4□□□□□ -0.26
SREBF1-216ENST00000490796 TRAV8-1A0A0A6YYK1 113 aa13.39□□□□□ -0.27
SREBF1-216ENST00000490796 TYMSP04818 313 aa13.39□□□□□ -0.27
SREBF1-216ENST00000490796 CRYGDP07320 174 aa13.39□□□□□ -0.27
SREBF1-216ENST00000490796 FUSP35637 526 aaKnown RBP eCLIP13.39□□□□□ -0.27
SREBF1-216ENST00000490796 GNG5P63218 68 aa13.39□□□□□ -0.27
SREBF1-216ENST00000490796 A0A087WTM6 91 aa13.38□□□□□ -0.27
SREBF1-216ENST00000490796 SERTM2A0A1B0GWG4 89 aa13.38□□□□□ -0.27
SREBF1-216ENST00000490796 EPM2AB3EWF7 344 aa13.38□□□□□ -0.27
SREBF1-216ENST00000490796 K7EQM0 130 aa13.38□□□□□ -0.27
SREBF1-216ENST00000490796 DNAH10OSP0CZ25 163 aa13.38□□□□□ -0.27
SREBF1-216ENST00000490796 CDC34P49427 236 aaPredicted RBP13.38□□□□□ -0.27
SREBF1-216ENST00000490796 ARL14EPLP0DKL9 152 aa13.37□□□□□ -0.27
SREBF1-216ENST00000490796 FBLL1A6NHQ2 334 aaKnown RBP13.36□□□□□ -0.27
SREBF1-216ENST00000490796 A6NHS1 94 aa13.36□□□□□ -0.27
SREBF1-216ENST00000490796 PSCAO43653 123 aa13.36□□□□□ -0.27
SREBF1-216ENST00000490796 ZNF876PQ49A33 203 aa13.36□□□□□ -0.27
SREBF1-216ENST00000490796 HSD17B11Q8NBQ5 300 aa13.36□□□□□ -0.27
SREBF1-216ENST00000490796 TVP23CQ96ET8 276 aa13.36□□□□□ -0.27
SREBF1-216ENST00000490796 SGK494Q96LW2 274 aa13.36□□□□□ -0.27
SREBF1-216ENST00000490796 TRAV8-6A0A0B4J262 113 aa13.35□□□□□ -0.27
SREBF1-216ENST00000490796 LOC100131303A0A0U1RQF7 123 aa13.35□□□□□ -0.27
SREBF1-216ENST00000490796 PFN1P07737 140 aaKnown RBP13.35□□□□□ -0.27
SREBF1-216ENST00000490796 GATA1P15976 413 aaPredicted RBP13.35□□□□□ -0.27
SREBF1-216ENST00000490796 ZFP69Q49AA0 526 aa13.35□□□□□ -0.27
SREBF1-216ENST00000490796 C5orf17Q8NAS9 161 aa13.35□□□□□ -0.27
SREBF1-216ENST00000490796 PRADC1Q9BSG0 188 aa13.35□□□□□ -0.27
SREBF1-216ENST00000490796 IGHV3-38A0A0C4DH36 116 aa13.34□□□□□ -0.27
SREBF1-216ENST00000490796 TAAR5O14804 337 aa13.34□□□□□ -0.27
SREBF1-216ENST00000490796 CIDEAO60543 219 aa13.34□□□□□ -0.27
SREBF1-216ENST00000490796 BOLA1Q9Y3E2 137 aa13.34□□□□□ -0.27
SREBF1-216ENST00000490796 MBP02144 154 aa13.33□□□□□ -0.28
SREBF1-216ENST00000490796 TCRAP04437 139 aa13.33□□□□□ -0.28
SREBF1-216ENST00000490796 STAG3L2P0CL84 134 aa13.33□□□□□ -0.28
SREBF1-216ENST00000490796 STAG3L3P0CL85 134 aa13.33□□□□□ -0.28
SREBF1-216ENST00000490796 TIRAPP58753 221 aa13.33□□□□□ -0.28
SREBF1-216ENST00000490796 OR10J3Q5JRS4 329 aa13.33□□□□□ -0.28
SREBF1-216ENST00000490796 GCGP01275 180 aa13.32□□□□□ -0.28
SREBF1-216ENST00000490796 GCHFRP30047 84 aa13.32□□□□□ -0.28
SREBF1-216ENST00000490796 RHOHQ15669 191 aa13.32□□□□□ -0.28
SREBF1-216ENST00000490796 SMUG1Q53HV7 270 aa13.32□□□□□ -0.28
SREBF1-216ENST00000490796 OR2G3Q8NGZ4 309 aa13.32□□□□□ -0.28
SREBF1-216ENST00000490796 RAB24Q969Q5 203 aa13.32□□□□□ -0.28
SREBF1-216ENST00000490796 PSG8Q9UQ74 426 aa13.32□□□□□ -0.28
SREBF1-216ENST00000490796 ALG5Q9Y673 324 aa13.32□□□□□ -0.28
SREBF1-216ENST00000490796 IGHV3-73A0A0B4J1V6 119 aa13.31□□□□□ -0.28
SREBF1-216ENST00000490796 GCSHP23434 173 aa13.31□□□□□ -0.28
SREBF1-216ENST00000490796 SUMO1P63165 101 aaKnown RBP13.31□□□□□ -0.28
SREBF1-216ENST00000490796 PRNTQ86SH4 94 aa13.31□□□□□ -0.28
SREBF1-216ENST00000490796 SLC25A29Q8N8R3 303 aa13.31□□□□□ -0.28
SREBF1-216ENST00000490796 FRZBQ92765 325 aa13.31□□□□□ -0.28
SREBF1-216ENST00000490796 PSMG3Q9BT73 122 aaPredicted RBP13.31□□□□□ -0.28
SREBF1-216ENST00000490796 TMEM167BQ9NRX6 74 aa13.31□□□□□ -0.28
SREBF1-216ENST00000490796 RS1O15537 224 aa13.3□□□□□ -0.28
SREBF1-216ENST00000490796 CXorf1O96002 111 aa13.3□□□□□ -0.28
SREBF1-216ENST00000490796 ATP6V0CP27449 155 aa13.3□□□□□ -0.28
SREBF1-216ENST00000490796 KRTAP10-1P60331 282 aa13.3□□□□□ -0.28
SREBF1-216ENST00000490796 SERF2P84101 59 aa13.3□□□□□ -0.28
SREBF1-216ENST00000490796 FLI1Q01543 452 aaPredicted RBP13.3□□□□□ -0.28
SREBF1-216ENST00000490796 CFAP126Q5VTH2 177 aa13.3□□□□□ -0.28
SREBF1-216ENST00000490796 ACTR3CQ9C0K3 210 aaPredicted RBP13.3□□□□□ -0.28
SREBF1-216ENST00000490796 MED28Q9H204 178 aa13.3□□□□□ -0.28
SREBF1-216ENST00000490796 TRBV6-4A0A1B0GX49 114 aa13.29□□□□□ -0.28
SREBF1-216ENST00000490796 ZNF80P51504 273 aaPredicted RBP13.29□□□□□ -0.28
SREBF1-216ENST00000490796 LINC01556Q5JQF7 62 aa13.29□□□□□ -0.28
SREBF1-216ENST00000490796 CYB561D1Q8N8Q1 229 aa13.29□□□□□ -0.28
SREBF1-216ENST00000490796 Q9HAA7 133 aa13.29□□□□□ -0.28
SREBF1-216ENST00000490796 EPDR1Q9UM22 224 aa13.29□□□□□ -0.28
SREBF1-216ENST00000490796 INAFM2P0DMQ5 153 aa13.28□□□□□ -0.28
SREBF1-216ENST00000490796 S100A4P26447 101 aaKnown RBP13.28□□□□□ -0.28
SREBF1-216ENST00000490796 XGP55808 180 aa13.28□□□□□ -0.28
SREBF1-216ENST00000490796 SAPCD1Q5SSQ6 148 aa13.28□□□□□ -0.28
SREBF1-216ENST00000490796 AQP10Q96PS8 301 aa13.28□□□□□ -0.28
SREBF1-216ENST00000490796 C11orf21Q9P2W6 132 aa13.28□□□□□ -0.28
SREBF1-216ENST00000490796 IGLV5-52A0A0A0MRZ9 124 aa13.27□□□□□ -0.29
SREBF1-216ENST00000490796 TMEM75Q8N9X5 138 aa13.27□□□□□ -0.29
SREBF1-216ENST00000490796 INO80EQ8NBZ0 244 aaPredicted RBP13.27□□□□□ -0.29
SREBF1-216ENST00000490796 SUN5Q8TC36 379 aa13.27□□□□□ -0.29
SREBF1-216ENST00000490796 TNFSF18Q9UNG2 199 aa13.27□□□□□ -0.29
SREBF1-216ENST00000490796 IBA57-AS1B1ANH7 110 aa13.26□□□□□ -0.29
SREBF1-216ENST00000490796 IGHV3-30P01768 117 aa13.26□□□□□ -0.29
SREBF1-216ENST00000490796 IGHV3-33P01772 117 aa13.26□□□□□ -0.29
SREBF1-216ENST00000490796 IGHV3-30-3P0DP02 117 aa13.26□□□□□ -0.29
SREBF1-216ENST00000490796 IGHV3-30-5P0DP03 117 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms