RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 MAP1LC3B2A6NCE7 125 aa7.36□□□□□ -1.23
TTC28-207ENST00000490475 PRSS29PA6NIE9 313 aa7.36□□□□□ -1.23
TTC28-207ENST00000490475 ZNF727A8MUV8 499 aa7.36□□□□□ -1.23
TTC28-207ENST00000490475 LINC00587B1AMM8 73 aa7.36□□□□□ -1.23
TTC28-207ENST00000490475 CRXO43186 299 aaPredicted RBP7.36□□□□□ -1.23
TTC28-207ENST00000490475 PRM2P04554 102 aa7.36□□□□□ -1.23
TTC28-207ENST00000490475 TYMSP04818 313 aa7.36□□□□□ -1.23
TTC28-207ENST00000490475 CT45A10P0DMU9 189 aa7.36□□□□□ -1.23
TTC28-207ENST00000490475 MED14OSP0DP75 135 aa7.36□□□□□ -1.23
TTC28-207ENST00000490475 NDUFA6P56556 154 aa7.36□□□□□ -1.23
TTC28-207ENST00000490475 TAS2R45P59539 299 aa7.36□□□□□ -1.23
TTC28-207ENST00000490475 RAB4BP61018 213 aa7.36□□□□□ -1.23
TTC28-207ENST00000490475 ERCC8Q13216 396 aa7.36□□□□□ -1.23
TTC28-207ENST00000490475 HIST3H2BBQ8N257 126 aa7.36□□□□□ -1.23
TTC28-207ENST00000490475 OR10J6PQ8NGY7 276 aa7.36□□□□□ -1.23
TTC28-207ENST00000490475 ACTR3CQ9C0K3 210 aaPredicted RBP7.36□□□□□ -1.23
TTC28-207ENST00000490475 MAP1LC3BQ9GZQ8 125 aa7.36□□□□□ -1.23
TTC28-207ENST00000490475 TRAV9-1A0A075B6T8 112 aa7.35□□□□□ -1.23
TTC28-207ENST00000490475 PHOX2AO14813 284 aa7.35□□□□□ -1.23
TTC28-207ENST00000490475 PDE6DO43924 150 aa7.35□□□□□ -1.23
TTC28-207ENST00000490475 CXCL1P09341 107 aa7.35□□□□□ -1.23
TTC28-207ENST00000490475 HTN3P15516 51 aa7.35□□□□□ -1.23
TTC28-207ENST00000490475 PKIAP61925 76 aa7.35□□□□□ -1.23
TTC28-207ENST00000490475 UBE2L3P68036 154 aaKnown RBP7.35□□□□□ -1.23
TTC28-207ENST00000490475 KIR3DS1Q14943 382 aa7.35□□□□□ -1.23
TTC28-207ENST00000490475 RAB24Q969Q5 203 aa7.35□□□□□ -1.23
TTC28-207ENST00000490475 AGPAT4-IT1Q9H0P7 198 aa7.35□□□□□ -1.23
TTC28-207ENST00000490475 AAMDCQ9H7C9 122 aa7.35□□□□□ -1.23
TTC28-207ENST00000490475 NPIPB6E9PJ23 425 aa7.34□□□□□ -1.23
TTC28-207ENST00000490475 F6UZH7 168 aa7.34□□□□□ -1.23
TTC28-207ENST00000490475 TSTD3H0UI37 97 aa7.34□□□□□ -1.23
TTC28-207ENST00000490475 GCGP01275 180 aa7.34□□□□□ -1.23
TTC28-207ENST00000490475 PFN1P07737 140 aaKnown RBP7.34□□□□□ -1.23
TTC28-207ENST00000490475 CDC34P49427 236 aaPredicted RBP7.34□□□□□ -1.23
TTC28-207ENST00000490475 ZNF726P1Q15940 193 aa7.34□□□□□ -1.23
TTC28-207ENST00000490475 PYY3Q5JQD4 70 aa7.34□□□□□ -1.23
TTC28-207ENST00000490475 KCNIP4Q6PIL6 250 aa7.34□□□□□ -1.23
TTC28-207ENST00000490475 ZNF493Q6ZR52 646 aa7.34□□□□□ -1.23
TTC28-207ENST00000490475 SSX7Q7RTT5 188 aa7.34□□□□□ -1.23
TTC28-207ENST00000490475 TMEM183AQ8IXX5 376 aa7.34□□□□□ -1.23
TTC28-207ENST00000490475 MRPL53Q96EL3 112 aaKnown RBP7.34□□□□□ -1.23
TTC28-207ENST00000490475 VGLL1Q99990 258 aa7.34□□□□□ -1.23
TTC28-207ENST00000490475 SMIM7Q9BQ49 75 aa7.34□□□□□ -1.23
TTC28-207ENST00000490475 C20orf144Q9BQM9 153 aa7.34□□□□□ -1.23
TTC28-207ENST00000490475 ATG101Q9BSB4 218 aa7.34□□□□□ -1.23
TTC28-207ENST00000490475 Q9H3A6 140 aa7.34□□□□□ -1.23
TTC28-207ENST00000490475 HECTD4Q9Y4D8 3996 aa7.34□□□□□ -1.24
TTC28-207ENST00000490475 IGKV2-40A0A087WW87 121 aaPredicted RBP7.33□□□□□ -1.24
TTC28-207ENST00000490475 TGIF2-C20orf24A0A0A6YYL0 155 aa7.33□□□□□ -1.24
TTC28-207ENST00000490475 A0A1B0GVY2 172 aa7.33□□□□□ -1.24
TTC28-207ENST00000490475 PGPA6NDG6 321 aa7.33□□□□□ -1.24
TTC28-207ENST00000490475 IFITM10A6NMD0 228 aa7.33□□□□□ -1.24
TTC28-207ENST00000490475 ZNF705GA8MUZ8 300 aaPredicted RBP7.33□□□□□ -1.24
TTC28-207ENST00000490475 H7BYZ3 331 aa7.33□□□□□ -1.24
TTC28-207ENST00000490475 J3KRW8 73 aa7.33□□□□□ -1.24
TTC28-207ENST00000490475 M0R2N4 97 aa7.33□□□□□ -1.24
TTC28-207ENST00000490475 IGKV2D-40P01614 121 aaPredicted RBP7.33□□□□□ -1.24
TTC28-207ENST00000490475 TRGC2P03986 189 aa7.33□□□□□ -1.24
TTC28-207ENST00000490475 ATP5G1P05496 136 aa7.33□□□□□ -1.24
TTC28-207ENST00000490475 TRGC1P0CF51 173 aa7.33□□□□□ -1.24
TTC28-207ENST00000490475 STAG3L2P0CL84 134 aa7.33□□□□□ -1.24
TTC28-207ENST00000490475 STAG3L3P0CL85 134 aa7.33□□□□□ -1.24
TTC28-207ENST00000490475 ARL14EPLP0DKL9 152 aa7.33□□□□□ -1.24
TTC28-207ENST00000490475 CDKN1BP46527 198 aa7.33□□□□□ -1.24
TTC28-207ENST00000490475 ATP5G3P48201 142 aa7.33□□□□□ -1.24
TTC28-207ENST00000490475 TAS2R60P59551 318 aa7.33□□□□□ -1.24
TTC28-207ENST00000490475 C1orf134Q5TEV5 83 aa7.33□□□□□ -1.24
TTC28-207ENST00000490475 PQLC2Q6ZP29 291 aa7.33□□□□□ -1.24
TTC28-207ENST00000490475 Q6ZR54 194 aa7.33□□□□□ -1.24
TTC28-207ENST00000490475 LYPD1Q8N2G4 141 aa7.33□□□□□ -1.24
TTC28-207ENST00000490475 SVIPQ8NHG7 77 aa7.33□□□□□ -1.24
TTC28-207ENST00000490475 C16orf74Q96GX8 76 aa7.33□□□□□ -1.24
TTC28-207ENST00000490475 LINC01587Q99440 93 aa7.33□□□□□ -1.24
TTC28-207ENST00000490475 CBY1Q9Y3M2 126 aa7.33□□□□□ -1.24
TTC28-207ENST00000490475 ARL2-SNX15V9GYD0 113 aa7.33□□□□□ -1.24
TTC28-207ENST00000490475 DNAH6Q9C0G6 4158 aa7.32□□□□□ -1.24
TTC28-207ENST00000490475 MUC4Q99102 2169 aa7.32□□□□□ -1.24
TTC28-207ENST00000490475 A0A1B0GV50 99 aa7.32□□□□□ -1.24
TTC28-207ENST00000490475 CBY3A6NI87 242 aa7.32□□□□□ -1.24
TTC28-207ENST00000490475 RTL8CO15255 209 aa7.32□□□□□ -1.24
TTC28-207ENST00000490475 HTN1P15515 57 aa7.32□□□□□ -1.24
TTC28-207ENST00000490475 AZU1P20160 251 aa7.32□□□□□ -1.24
TTC28-207ENST00000490475 GCHFRP30047 84 aa7.32□□□□□ -1.24
TTC28-207ENST00000490475 JOSD1Q15040 202 aaPredicted RBP7.32□□□□□ -1.24
TTC28-207ENST00000490475 FRZBQ92765 325 aa7.32□□□□□ -1.24
TTC28-207ENST00000490475 LINC00477Q96M19 166 aa7.32□□□□□ -1.24
TTC28-207ENST00000490475 TIMM8BQ9Y5J9 83 aaPredicted RBP7.32□□□□□ -1.24
TTC28-207ENST00000490475 VPS13DQ5THJ4 4388 aa7.32□□□□□ -1.24
TTC28-207ENST00000490475 TRAV12-3A0A0B4J271 114 aa7.31□□□□□ -1.24
TTC28-207ENST00000490475 DIRC3C9JPN6 131 aa7.31□□□□□ -1.24
TTC28-207ENST00000490475 LEPP41159 167 aa7.31□□□□□ -1.24
TTC28-207ENST00000490475 CSN1S1P47710 185 aa7.31□□□□□ -1.24
TTC28-207ENST00000490475 CEBPGP53567 150 aa7.31□□□□□ -1.24
TTC28-207ENST00000490475 CCL18P55774 89 aa7.31□□□□□ -1.24
TTC28-207ENST00000490475 RPL23P62829 140 aaKnown RBP7.31□□□□□ -1.24
TTC28-207ENST00000490475 RPL19P84098 196 aaKnown RBP7.31□□□□□ -1.24
TTC28-207ENST00000490475 GFI1BQ5VTD9 330 aa7.31□□□□□ -1.24
TTC28-207ENST00000490475 C9orf47Q6ZRZ4 202 aa7.31□□□□□ -1.24
TTC28-207ENST00000490475 OR10D4PQ8NGN7 298 aa7.31□□□□□ -1.24
TTC28-207ENST00000490475 FAM19A4Q96LR4 140 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms