RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 SCGB1C1Q8TD33 95 aa10.57□□□□□ -0.72
NUP58-213ENST00000490231 FRZBQ92765 325 aa10.57□□□□□ -0.72
NUP58-213ENST00000490231 MBD2Q9UBB5 411 aa10.57□□□□□ -0.72
NUP58-213ENST00000490231 NAGKQ9UJ70 344 aa10.57□□□□□ -0.72
NUP58-213ENST00000490231 INMT-MINDY4F8WBC2 141 aa10.56□□□□□ -0.72
NUP58-213ENST00000490231 GCSHP23434 173 aa10.56□□□□□ -0.72
NUP58-213ENST00000490231 HERC1Q15751 4861 aa10.56□□□□□ -0.72
NUP58-213ENST00000490231 FAT1Q14517 4588 aa10.55□□□□□ -0.72
NUP58-213ENST00000490231 MPC2O95563 127 aa10.55□□□□□ -0.72
NUP58-213ENST00000490231 TYMSP04818 313 aa10.55□□□□□ -0.72
NUP58-213ENST00000490231 GATA1P15976 413 aaPredicted RBP10.55□□□□□ -0.72
NUP58-213ENST00000490231 RPL12P30050 165 aaKnown RBP10.55□□□□□ -0.72
NUP58-213ENST00000490231 PQLC2Q6ZP29 291 aa10.55□□□□□ -0.72
NUP58-213ENST00000490231 KCNS1Q96KK3 526 aa10.55□□□□□ -0.72
NUP58-213ENST00000490231 SDF2L1Q9HCN8 221 aa10.55□□□□□ -0.72
NUP58-213ENST00000490231 RPH3ALQ9UNE2 315 aa10.55□□□□□ -0.72
NUP58-213ENST00000490231 IGHV3-38A0A0C4DH36 116 aa10.54□□□□□ -0.72
NUP58-213ENST00000490231 LOC100131303A0A0U1RQF7 123 aa10.54□□□□□ -0.72
NUP58-213ENST00000490231 ACOT6Q3I5F7 207 aaPredicted RBP10.54□□□□□ -0.72
NUP58-213ENST00000490231 GOLT1AQ6ZVE7 132 aa10.54□□□□□ -0.72
NUP58-213ENST00000490231 TVP23CQ96ET8 276 aa10.54□□□□□ -0.72
NUP58-213ENST00000490231 SMIM3Q9BZL3 60 aa10.54□□□□□ -0.72
NUP58-213ENST00000490231 TREM1Q9NP99 234 aa10.54□□□□□ -0.72
NUP58-213ENST00000490231 BOLA1Q9Y3E2 137 aa10.54□□□□□ -0.72
NUP58-213ENST00000490231 A0A1W2PPV4 95 aa10.53□□□□□ -0.72
NUP58-213ENST00000490231 F6UZH7 168 aa10.53□□□□□ -0.72
NUP58-213ENST00000490231 CIDEAO60543 219 aa10.53□□□□□ -0.72
NUP58-213ENST00000490231 EIF3GO75821 320 aaKnown RBP eCLIP10.53□□□□□ -0.72
NUP58-213ENST00000490231 PPT1P50897 306 aa10.53□□□□□ -0.72
NUP58-213ENST00000490231 LINC01556Q5JQF7 62 aa10.53□□□□□ -0.72
NUP58-213ENST00000490231 NHLRC2Q8NBF2 726 aa10.53□□□□□ -0.72
NUP58-213ENST00000490231 NTN5Q8WTR8 489 aaPredicted RBP10.53□□□□□ -0.72
NUP58-213ENST00000490231 MARVELD1Q9BSK0 173 aa10.53□□□□□ -0.72
NUP58-213ENST00000490231 TRAV8-1A0A0A6YYK1 113 aa10.52□□□□□ -0.73
NUP58-213ENST00000490231 LRCOL1A6NCL2 159 aa10.52□□□□□ -0.73
NUP58-213ENST00000490231 IBA57-AS1B1ANH7 110 aa10.52□□□□□ -0.73
NUP58-213ENST00000490231 PSCAO43653 123 aa10.52□□□□□ -0.73
NUP58-213ENST00000490231 PFN1P07737 140 aaKnown RBP10.52□□□□□ -0.73
NUP58-213ENST00000490231 ASB13Q8WXK3 278 aa10.52□□□□□ -0.73
NUP58-213ENST00000490231 WFDC1Q9HC57 220 aa10.52□□□□□ -0.73
NUP58-213ENST00000490231 IGLV5-52A0A0A0MRZ9 124 aa10.51□□□□□ -0.73
NUP58-213ENST00000490231 TRAV8-6A0A0B4J262 113 aa10.51□□□□□ -0.73
NUP58-213ENST00000490231 SERTM2A0A1B0GWG4 89 aa10.51□□□□□ -0.73
NUP58-213ENST00000490231 FBLL1A6NHQ2 334 aaKnown RBP10.51□□□□□ -0.73
NUP58-213ENST00000490231 SSNA1O43805 119 aa10.51□□□□□ -0.73
NUP58-213ENST00000490231 ZNF876PQ49A33 203 aa10.51□□□□□ -0.73
NUP58-213ENST00000490231 SLC25A29Q8N8R3 303 aa10.51□□□□□ -0.73
NUP58-213ENST00000490231 TRBV6-4A0A1B0GX49 114 aa10.5□□□□□ -0.73
NUP58-213ENST00000490231 SMR3BP02814 79 aaPredicted RBP10.5□□□□□ -0.73
NUP58-213ENST00000490231 RAB2AP61019 212 aa10.5□□□□□ -0.73
NUP58-213ENST00000490231 GNG5P63218 68 aa10.5□□□□□ -0.73
NUP58-213ENST00000490231 PRADC1Q9BSG0 188 aa10.5□□□□□ -0.73
NUP58-213ENST00000490231 NDFIP1Q9BT67 221 aa10.5□□□□□ -0.73
NUP58-213ENST00000490231 TMEM70Q9BUB7 260 aa10.5□□□□□ -0.73
NUP58-213ENST00000490231 FAM229AH3BQW9 127 aa10.49□□□□□ -0.73
NUP58-213ENST00000490231 RS1O15537 224 aa10.49□□□□□ -0.73
NUP58-213ENST00000490231 RHOHQ15669 191 aa10.49□□□□□ -0.73
NUP58-213ENST00000490231 OR10J3Q5JRS4 329 aa10.49□□□□□ -0.73
NUP58-213ENST00000490231 CFAP126Q5VTH2 177 aa10.49□□□□□ -0.73
NUP58-213ENST00000490231 OR10G9Q8NGN4 311 aa10.49□□□□□ -0.73
NUP58-213ENST00000490231 OR10G7Q8NGN6 311 aa10.49□□□□□ -0.73
NUP58-213ENST00000490231 VPS13BQ7Z7G8 4022 aa10.49□□□□□ -0.73
NUP58-213ENST00000490231 TAAR5O14804 337 aa10.48□□□□□ -0.73
NUP58-213ENST00000490231 TCRAP04437 139 aa10.48□□□□□ -0.73
NUP58-213ENST00000490231 LELP1Q5T871 98 aa10.48□□□□□ -0.73
NUP58-213ENST00000490231 DPPA3Q6W0C5 159 aa10.48□□□□□ -0.73
NUP58-213ENST00000490231 Q8N814 137 aa10.48□□□□□ -0.73
NUP58-213ENST00000490231 PTH2Q96A98 100 aa10.48□□□□□ -0.73
NUP58-213ENST00000490231 C9orf85Q96MD7 179 aa10.48□□□□□ -0.73
NUP58-213ENST00000490231 C11orf21Q9P2W6 132 aa10.48□□□□□ -0.73
NUP58-213ENST00000490231 HMGB3O15347 200 aaKnown RBP10.47□□□□□ -0.73
NUP58-213ENST00000490231 STAG3L2P0CL84 134 aa10.47□□□□□ -0.73
NUP58-213ENST00000490231 STAG3L3P0CL85 134 aa10.47□□□□□ -0.73
NUP58-213ENST00000490231 ARL14EPLP0DKL9 152 aa10.47□□□□□ -0.73
NUP58-213ENST00000490231 ZNF80P51504 273 aaPredicted RBP10.47□□□□□ -0.73
NUP58-213ENST00000490231 C5orf17Q8NAS9 161 aa10.47□□□□□ -0.73
NUP58-213ENST00000490231 SUN5Q8TC36 379 aa10.47□□□□□ -0.73
NUP58-213ENST00000490231 SGK494Q96LW2 274 aa10.47□□□□□ -0.73
NUP58-213ENST00000490231 K7EQM0 130 aa10.46□□□□□ -0.73
NUP58-213ENST00000490231 MGST1P10620 155 aaKnown RBP10.46□□□□□ -0.73
NUP58-213ENST00000490231 CDC34P49427 236 aaPredicted RBP10.46□□□□□ -0.73
NUP58-213ENST00000490231 DEFA1P59665 94 aa10.46□□□□□ -0.73
NUP58-213ENST00000490231 DEFA3P59666 94 aa10.46□□□□□ -0.73
NUP58-213ENST00000490231 LAGE3Q14657 143 aa10.46□□□□□ -0.73
NUP58-213ENST00000490231 OR2G3Q8NGZ4 309 aa10.46□□□□□ -0.73
NUP58-213ENST00000490231 GTSF1LQ9H1H1 148 aa10.46□□□□□ -0.73
NUP58-213ENST00000490231 Q9HAA7 133 aa10.46□□□□□ -0.73
NUP58-213ENST00000490231 PSG8Q9UQ74 426 aa10.46□□□□□ -0.73
NUP58-213ENST00000490231 IGHV3-73A0A0B4J1V6 119 aa10.45□□□□□ -0.74
NUP58-213ENST00000490231 GCGP01275 180 aa10.45□□□□□ -0.74
NUP58-213ENST00000490231 IGHV3-30P01768 117 aa10.45□□□□□ -0.74
NUP58-213ENST00000490231 IGHV3-33P01772 117 aa10.45□□□□□ -0.74
NUP58-213ENST00000490231 IGHV3-30-3P0DP02 117 aa10.45□□□□□ -0.74
NUP58-213ENST00000490231 IGHV3-30-5P0DP03 117 aa10.45□□□□□ -0.74
NUP58-213ENST00000490231 HAMPP81172 84 aa10.45□□□□□ -0.74
NUP58-213ENST00000490231 ZFP69Q49AA0 526 aa10.45□□□□□ -0.74
NUP58-213ENST00000490231 ZNF506Q5JVG8 444 aa10.45□□□□□ -0.74
NUP58-213ENST00000490231 Q6ZSN1 163 aa10.45□□□□□ -0.74
NUP58-213ENST00000490231 DMBT1Q9UGM3 2413 aaPredicted RBP10.45□□□□□ -0.74
NUP58-213ENST00000490231 MYCBP2O75592 4640 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms