RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 HERVK_113P63121 156 aa1.97□□□□□ -2.09
UBXN4-208ENST00000490163 RPL36AP83881 106 aaKnown RBP1.97□□□□□ -2.09
UBXN4-208ENST00000490163 LOXL1Q08397 574 aaPredicted RBP1.97□□□□□ -2.09
UBXN4-208ENST00000490163 EDDM3AQ14507 147 aa1.97□□□□□ -2.09
UBXN4-208ENST00000490163 C12orf74Q32Q52 190 aa1.97□□□□□ -2.09
UBXN4-208ENST00000490163 LGALS9BQ3B8N2 356 aa1.97□□□□□ -2.09
UBXN4-208ENST00000490163 LGALS9CQ6DKI2 356 aa1.97□□□□□ -2.09
UBXN4-208ENST00000490163 C22orf39Q6P5X5 142 aa1.97□□□□□ -2.09
UBXN4-208ENST00000490163 CEND1Q8N111 149 aa1.97□□□□□ -2.09
UBXN4-208ENST00000490163 C15orf53Q8NAA6 179 aa1.97□□□□□ -2.09
UBXN4-208ENST00000490163 OR9G1Q8NH87 305 aa1.97□□□□□ -2.09
UBXN4-208ENST00000490163 TMEM101Q96IK0 257 aa1.97□□□□□ -2.09
UBXN4-208ENST00000490163 IFI27L2Q9H2X8 130 aa1.97□□□□□ -2.09
UBXN4-208ENST00000490163 TMEM167BQ9NRX6 74 aa1.97□□□□□ -2.09
UBXN4-208ENST00000490163 C21orf62Q9NYP8 219 aa1.97□□□□□ -2.09
UBXN4-208ENST00000490163 PRO0461Q9UI25 63 aa1.97□□□□□ -2.09
UBXN4-208ENST00000490163 PRRC2BQ5JSZ5 2229 aaKnown RBP1.97□□□□□ -2.09
UBXN4-208ENST00000490163 RTTNQ86VV8 2226 aa1.97□□□□□ -2.09
UBXN4-208ENST00000490163 TRAV8-4A0A0B4J246 113 aa1.97□□□□□ -2.09
UBXN4-208ENST00000490163 TRAV4A0A0B4J268 109 aa1.97□□□□□ -2.09
UBXN4-208ENST00000490163 IGHV1OR15-9A0A0B4J2B8 117 aa1.97□□□□□ -2.09
UBXN4-208ENST00000490163 FAM168BA1KXE4 195 aa1.97□□□□□ -2.09
UBXN4-208ENST00000490163 C5orf49A4QMS7 147 aa1.97□□□□□ -2.09
UBXN4-208ENST00000490163 DHRS3O75911 302 aa1.97□□□□□ -2.09
UBXN4-208ENST00000490163 IGKV2-30P06310 120 aa1.97□□□□□ -2.09
UBXN4-208ENST00000490163 DAZ2Q13117 558 aaKnown RBP1.97□□□□□ -2.09
UBXN4-208ENST00000490163 C9orf129Q5T035 196 aaKnown RBP1.97□□□□□ -2.09
UBXN4-208ENST00000490163 CFAP126Q5VTH2 177 aa1.97□□□□□ -2.09
UBXN4-208ENST00000490163 TMEM14EPQ6UXP3 125 aa1.97□□□□□ -2.09
UBXN4-208ENST00000490163 Q6ZRU5 148 aa1.97□□□□□ -2.09
UBXN4-208ENST00000490163 PCP2Q8IVA1 136 aa1.97□□□□□ -2.09
UBXN4-208ENST00000490163 CYYR1Q96J86 154 aa1.97□□□□□ -2.09
UBXN4-208ENST00000490163 SPANXDQ9BXN6 97 aa1.97□□□□□ -2.09
UBXN4-208ENST00000490163 DAZ3Q9NR90 486 aaKnown RBP1.97□□□□□ -2.09
UBXN4-208ENST00000490163 ZNF355PQ9NSJ1 428 aa1.97□□□□□ -2.09
UBXN4-208ENST00000490163 SPTBN5Q9NRC6 3674 aaKnown RBP1.97□□□□□ -2.09
UBXN4-208ENST00000490163 DIDO1Q9BTC0 2240 aaKnown RBP1.97□□□□□ -2.09
UBXN4-208ENST00000490163 TRAV2A0A0B4J234 112 aa1.96□□□□□ -2.09
UBXN4-208ENST00000490163 HIGD1CA8MV81 97 aa1.96□□□□□ -2.09
UBXN4-208ENST00000490163 PGLYRP1O75594 196 aaPredicted RBP1.96□□□□□ -2.09
UBXN4-208ENST00000490163 P01737 135 aa1.96□□□□□ -2.09
UBXN4-208ENST00000490163 IGLC6P0CF74 106 aa1.96□□□□□ -2.09
UBXN4-208ENST00000490163 RPS28P62857 69 aaKnown RBP1.96□□□□□ -2.09
UBXN4-208ENST00000490163 PRDX1Q06830 199 aaKnown RBP1.96□□□□□ -2.09
UBXN4-208ENST00000490163 PMVKQ15126 192 aa1.96□□□□□ -2.09
UBXN4-208ENST00000490163 CST6Q15828 149 aa1.96□□□□□ -2.09
UBXN4-208ENST00000490163 NNATQ16517 81 aa1.96□□□□□ -2.09
UBXN4-208ENST00000490163 DEFB134Q4QY38 66 aa1.96□□□□□ -2.09
UBXN4-208ENST00000490163 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.09
UBXN4-208ENST00000490163 HRCT1Q6UXD1 115 aa1.96□□□□□ -2.09
UBXN4-208ENST00000490163 ZNF818PQ6ZRF7 136 aa1.96□□□□□ -2.09
UBXN4-208ENST00000490163 ZNRF2Q8NHG8 242 aa1.96□□□□□ -2.09
UBXN4-208ENST00000490163 BORCS8Q96FH0 119 aa1.96□□□□□ -2.09
UBXN4-208ENST00000490163 LINC01587Q99440 93 aa1.96□□□□□ -2.09
UBXN4-208ENST00000490163 EPDR1Q9UM22 224 aa1.96□□□□□ -2.09
UBXN4-208ENST00000490163 ESPL1Q14674 2120 aa1.96□□□□□ -2.1
UBXN4-208ENST00000490163 ATP5G1P05496 136 aa1.96□□□□□ -2.1
UBXN4-208ENST00000490163 ZNF137PP52743 207 aa1.96□□□□□ -2.1
UBXN4-208ENST00000490163 DSCR4P56555 118 aaPredicted RBP1.96□□□□□ -2.1
UBXN4-208ENST00000490163 HSPE1P61604 102 aaKnown RBP1.96□□□□□ -2.1
UBXN4-208ENST00000490163 ZNF497Q6ZNH5 498 aa1.96□□□□□ -2.1
UBXN4-208ENST00000490163 Q6ZS49 121 aa1.96□□□□□ -2.1
UBXN4-208ENST00000490163 ANKRD29Q8N6D5 301 aa1.96□□□□□ -2.1
UBXN4-208ENST00000490163 CHD7Q9P2D1 2997 aa1.96□□□□□ -2.1
UBXN4-208ENST00000490163 AGRNO00468 2067 aa1.96□□□□□ -2.1
UBXN4-208ENST00000490163 IGHV3OR15-7A0A075B7D8 119 aa1.96□□□□□ -2.1
UBXN4-208ENST00000490163 C4orf51C9J302 202 aa1.96□□□□□ -2.1
UBXN4-208ENST00000490163 UQCRQO14949 82 aa1.96□□□□□ -2.1
UBXN4-208ENST00000490163 KRTAP1-4P0C5Y4 121 aa1.96□□□□□ -2.1
UBXN4-208ENST00000490163 TNFAIP6P98066 277 aaPredicted RBP1.96□□□□□ -2.1
UBXN4-208ENST00000490163 ZNF816Q0VGE8 651 aaPredicted RBP1.96□□□□□ -2.1
UBXN4-208ENST00000490163 RNASE13Q5GAN3 156 aaKnown RBP1.96□□□□□ -2.1
UBXN4-208ENST00000490163 ZNF493Q6ZR52 646 aa1.96□□□□□ -2.1
UBXN4-208ENST00000490163 RPRMLQ8N4K4 120 aa1.96□□□□□ -2.1
UBXN4-208ENST00000490163 C3orf22Q8N5N4 141 aa1.96□□□□□ -2.1
UBXN4-208ENST00000490163 CARD19Q96LW7 228 aa1.96□□□□□ -2.1
UBXN4-208ENST00000490163 IDI2-AS1Q9NZ38 188 aa1.96□□□□□ -2.1
UBXN4-208ENST00000490163 PRNDQ9UKY0 176 aa1.96□□□□□ -2.1
UBXN4-208ENST00000490163 PKIGQ9Y2B9 76 aa1.96□□□□□ -2.1
UBXN4-208ENST00000490163 KNTC1P50748 2209 aa1.95□□□□□ -2.1
UBXN4-208ENST00000490163 TANC2Q9HCD6 1990 aa1.95□□□□□ -2.1
UBXN4-208ENST00000490163 IGKV1-9A0A0C4DH69 117 aa1.95□□□□□ -2.1
UBXN4-208ENST00000490163 IGKV1-6A0A0C4DH72 117 aa1.95□□□□□ -2.1
UBXN4-208ENST00000490163 NCR2O95944 276 aa1.95□□□□□ -2.1
UBXN4-208ENST00000490163 IGHV3-11P01762 117 aa1.95□□□□□ -2.1
UBXN4-208ENST00000490163 GDF5OSQ5U4N7 250 aa1.95□□□□□ -2.1
UBXN4-208ENST00000490163 MIC13Q5XKP0 118 aa1.95□□□□□ -2.1
UBXN4-208ENST00000490163 TMEM105Q8N8V8 129 aa1.95□□□□□ -2.1
UBXN4-208ENST00000490163 KLHL30-AS1Q8NEE0 82 aa1.95□□□□□ -2.1
UBXN4-208ENST00000490163 FAM57AQ8TBR7 257 aa1.95□□□□□ -2.1
UBXN4-208ENST00000490163 IFI27L1Q96BM0 104 aa1.95□□□□□ -2.1
UBXN4-208ENST00000490163 LINC00477Q96M19 166 aa1.95□□□□□ -2.1
UBXN4-208ENST00000490163 SLC25A2Q9BXI2 301 aa1.95□□□□□ -2.1
UBXN4-208ENST00000490163 AICDAQ9GZX7 198 aa1.95□□□□□ -2.1
UBXN4-208ENST00000490163 UNC13CQ8NB66 2214 aa1.95□□□□□ -2.1
UBXN4-208ENST00000490163 TRBV25-1A0A075B6N4 114 aa1.95□□□□□ -2.1
UBXN4-208ENST00000490163 IGHV3-66A0A0C4DH42 116 aa1.95□□□□□ -2.1
UBXN4-208ENST00000490163 IGHV7-4-1A0A0J9YVY3 117 aa1.95□□□□□ -2.1
UBXN4-208ENST00000490163 FAM236AA0A1B0GUQ0 79 aa1.95□□□□□ -2.1
UBXN4-208ENST00000490163 FAM236BA0A1B0GV22 79 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms