RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 SPG11Q96JI7 2443 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 ANK3Q12955 4377 aaKnown RBP1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 ZANQ9Y493 2812 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 HEATR5AQ86XA9 2040 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 A8MWP6 167 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 EDF1O60869 148 aaKnown RBP1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 NAPSAO96009 420 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 LINC00694P0DN24 101 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 ATP6V0CP27449 155 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 RPL18Q07020 188 aaKnown RBP1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 SCGB2B2Q4G0G5 96 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 MORN2Q502X0 79 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 TMEM69Q5SWH9 247 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 GLYATL3Q5SZD4 288 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 TMEM244Q5VVB8 128 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 RPL22L1Q6P5R6 122 aaKnown RBP1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 ZNF322Q6U7Q0 402 aaPredicted RBP1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 HMGN2P46Q86SG4 172 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 LYPD6Q86Y78 171 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 OR8I2Q8N0Y5 310 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 C3orf22Q8N5N4 141 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 C3orf56Q8N813 242 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 OR2T10Q8NGZ9 312 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 CLDND2Q8NHS1 167 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 UBALD1Q8TB05 177 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 C12orf57Q99622 126 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 MGLLQ99685 303 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 GGACTQ9BVM4 153 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 MRPL32Q9BYC8 188 aaKnown RBP1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 YIPF3Q9GZM5 350 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 TUBA4BQ9H853 241 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 RNF122Q9H9V4 155 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 ERG28Q9UKR5 140 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 AKAP6Q13023 2319 aa1.9□□□□□ -2.1
DEPDC1-204ENST00000489862 DNHD1Q96M86 4753 aa1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 PKDREJQ9NTG1 2253 aa1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 LOC100130705A0A1B0GUX0 176 aa1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 H3BT86 120 aa1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 FXYD1O00168 92 aa1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 SULT1C4O75897 302 aa1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 OR2H2O95918 312 aa1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 IGHV1-69P01742 117 aa1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 PRB2P02812 416 aaPredicted RBP1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 HMGN2P05204 90 aaKnown RBP1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 SCTP09683 121 aa1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 ZNF22P17026 224 aaPredicted RBP1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 RPL27AP46776 148 aaKnown RBP1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 TMBIM6P55061 237 aa1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 SUPT4H1P63272 117 aaKnown RBP1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 EIF4EBP1Q13541 118 aaPredicted RBP1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 LINC00483Q53H64 154 aa1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 C1orf140Q5VVS0 124 aa1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 ZNF660Q6AZW8 331 aaPredicted RBP1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 PP632Q6XCG6 107 aa1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 OR5D16Q8NGK9 328 aa1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 MUC7Q8TAX7 377 aa1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 C10orf82Q8WW14 230 aa1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 C2orf50Q96LR7 162 aa1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 PPP3R2Q96LZ3 170 aa1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 TP53RKQ96S44 253 aa1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 SDF2Q99470 211 aa1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 TMEM70Q9BUB7 260 aa1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 SAR1AQ9NR31 198 aa1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 SPANXA1Q9NS26 97 aa1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 MRPL16Q9NX20 251 aaKnown RBP1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 FAM215AQ9Y5M1 114 aa1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 HIVEP1P15822 2718 aa1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 ROS1P08922 2347 aa1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 CACNA1CQ13936 2221 aa1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 ABCA4P78363 2273 aa1.9□□□□□ -2.11
DEPDC1-204ENST00000489862 FREM1Q5H8C1 2179 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 NCOA6Q14686 2063 aaPredicted RBP1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 TEP1Q99973 2627 aaKnown RBP1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 RTTNQ86VV8 2226 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 BORCS7-ASMTA0A0B4J1R7 106 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 TRAV17A0A0B4J275 112 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 FABP5P3A8MUU1 101 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 C19orf84I3L1E1 186 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 HMGN4O00479 90 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 TPST1O60507 370 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 PFDN1O60925 122 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 LYZL6O75951 148 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 CPSF4O95639 269 aaKnown RBP1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 ZNF25P17030 456 aaPredicted RBP1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 RPL28P46779 137 aaKnown RBP1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 POLR2JP52435 117 aaKnown RBP1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 ZNF816Q0VGE8 651 aaPredicted RBP1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 KRTAP25-1Q3LHN0 102 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 KPRPQ5T749 579 aaPredicted RBP1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 TMEM14EPQ6UXP3 125 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 SOSTDC1Q6X4U4 206 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 LRRC28Q86X40 367 aaPredicted RBP1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 PDZD9Q8IXQ8 264 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 ST20-AS1Q8NBB2 130 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 OR8D4Q8NGM9 314 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 SMCR5Q8TEV8 140 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 BRK1Q8WUW1 75 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 IMMP2LQ96T52 175 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 PRADC1Q9BSG0 188 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms