RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 IGHV3-16A0A0C4DH30 117 aa12.35□□□□□ -0.43
ABCF3-217ENST00000489719 GGTLC3B5MD39 225 aa12.35□□□□□ -0.43
ABCF3-217ENST00000489719 M0R2P5 195 aa12.35□□□□□ -0.43
ABCF3-217ENST00000489719 FHL2Q14192 279 aa12.35□□□□□ -0.43
ABCF3-217ENST00000489719 ZFP69Q49AA0 526 aa12.35□□□□□ -0.43
ABCF3-217ENST00000489719 SMUG1Q53HV7 270 aa12.35□□□□□ -0.43
ABCF3-217ENST00000489719 NKX6-2Q9C056 277 aaPredicted RBP12.35□□□□□ -0.43
ABCF3-217ENST00000489719 GCGP01275 180 aa12.34□□□□□ -0.43
ABCF3-217ENST00000489719 CRYBA4P53673 196 aa12.34□□□□□ -0.43
ABCF3-217ENST00000489719 FGF8P55075 233 aaPredicted RBP12.34□□□□□ -0.43
ABCF3-217ENST00000489719 UBE2G2P60604 165 aa12.34□□□□□ -0.43
ABCF3-217ENST00000489719 C6orf223Q8N319 242 aa12.34□□□□□ -0.43
ABCF3-217ENST00000489719 TMEM75Q8N9X5 138 aa12.34□□□□□ -0.43
ABCF3-217ENST00000489719 UPK3BQ9BT76 320 aa12.34□□□□□ -0.43
ABCF3-217ENST00000489719 MRPS16Q9Y3D3 137 aaKnown RBP12.34□□□□□ -0.43
ABCF3-217ENST00000489719 DNAH17Q9UFH2 4485 aa12.34□□□□□ -0.43
ABCF3-217ENST00000489719 A0A1B0GVY2 172 aa12.33□□□□□ -0.44
ABCF3-217ENST00000489719 TYMSP04818 313 aa12.33□□□□□ -0.44
ABCF3-217ENST00000489719 SFTA3P0C7M3 94 aa12.33□□□□□ -0.44
ABCF3-217ENST00000489719 PPT1P50897 306 aa12.33□□□□□ -0.44
ABCF3-217ENST00000489719 MRPL23Q16540 153 aaKnown RBP12.33□□□□□ -0.44
ABCF3-217ENST00000489719 KCNRGQ8N5I3 272 aa12.33□□□□□ -0.44
ABCF3-217ENST00000489719 OR4C5Q8NGB2 326 aa12.33□□□□□ -0.44
ABCF3-217ENST00000489719 STOML3Q8TAV4 291 aa12.33□□□□□ -0.44
ABCF3-217ENST00000489719 ZNF479Q96JC4 524 aa12.33□□□□□ -0.44
ABCF3-217ENST00000489719 HMSDA8MTL9 139 aa12.32□□□□□ -0.44
ABCF3-217ENST00000489719 IGLV2-11P01706 119 aa12.32□□□□□ -0.44
ABCF3-217ENST00000489719 PFN1P07737 140 aaKnown RBP12.32□□□□□ -0.44
ABCF3-217ENST00000489719 ZNF80P51504 273 aaPredicted RBP12.32□□□□□ -0.44
ABCF3-217ENST00000489719 TTC32Q5I0X7 151 aa12.32□□□□□ -0.44
ABCF3-217ENST00000489719 LINC00479Q96M42 142 aa12.32□□□□□ -0.44
ABCF3-217ENST00000489719 TRAV4A0A0B4J268 109 aa12.31□□□□□ -0.44
ABCF3-217ENST00000489719 TRAV34A0A0B4J273 112 aa12.31□□□□□ -0.44
ABCF3-217ENST00000489719 A0A0D9SG52 128 aa12.31□□□□□ -0.44
ABCF3-217ENST00000489719 MAP1LC3B2A6NCE7 125 aa12.31□□□□□ -0.44
ABCF3-217ENST00000489719 ZNF345Q14585 488 aa12.31□□□□□ -0.44
ABCF3-217ENST00000489719 PCNPQ8WW12 178 aaKnown RBP12.31□□□□□ -0.44
ABCF3-217ENST00000489719 HIST1H2BAQ96A08 127 aa12.31□□□□□ -0.44
ABCF3-217ENST00000489719 MAP1LC3BQ9GZQ8 125 aa12.31□□□□□ -0.44
ABCF3-217ENST00000489719 FAM74A7A6NL05 159 aa12.3□□□□□ -0.44
ABCF3-217ENST00000489719 C9JCJ5 164 aa12.3□□□□□ -0.44
ABCF3-217ENST00000489719 PEX7O00628 323 aa12.3□□□□□ -0.44
ABCF3-217ENST00000489719 NEGR1Q7Z3B1 354 aa12.3□□□□□ -0.44
ABCF3-217ENST00000489719 NACAE9PAV3 2078 aa12.3□□□□□ -0.44
ABCF3-217ENST00000489719 HECTD4Q9Y4D8 3996 aa12.29□□□□□ -0.44
ABCF3-217ENST00000489719 A0A1W2PPQ1 181 aa12.29□□□□□ -0.44
ABCF3-217ENST00000489719 KANTRA0A1W2PQU2 76 aa12.29□□□□□ -0.44
ABCF3-217ENST00000489719 ORM1P02763 201 aa12.29□□□□□ -0.44
ABCF3-217ENST00000489719 OR11H4Q8NGC9 324 aa12.29□□□□□ -0.44
ABCF3-217ENST00000489719 ZNF471Q9BX82 626 aaPredicted RBP12.29□□□□□ -0.44
ABCF3-217ENST00000489719 C11orf21Q9P2W6 132 aa12.29□□□□□ -0.44
ABCF3-217ENST00000489719 FABP5P3A8MUU1 101 aa12.28□□□□□ -0.44
ABCF3-217ENST00000489719 SEC11BP0C7V7 166 aa12.28□□□□□ -0.44
ABCF3-217ENST00000489719 GYPEP15421 78 aa12.28□□□□□ -0.44
ABCF3-217ENST00000489719 SRIP30626 198 aa12.28□□□□□ -0.44
ABCF3-217ENST00000489719 EIF5AP63241 154 aaKnown RBP12.28□□□□□ -0.44
ABCF3-217ENST00000489719 ZNF876PQ49A33 203 aa12.28□□□□□ -0.44
ABCF3-217ENST00000489719 CST9LP1Q5W188 147 aa12.28□□□□□ -0.44
ABCF3-217ENST00000489719 LYPD5Q6UWN5 251 aa12.28□□□□□ -0.44
ABCF3-217ENST00000489719 ARL2-SNX15V9GYD0 113 aa12.28□□□□□ -0.44
ABCF3-217ENST00000489719 FAT2Q9NYQ8 4349 aa12.28□□□□□ -0.44
ABCF3-217ENST00000489719 UMAD1C9J7I0 102 aa12.27□□□□□ -0.45
ABCF3-217ENST00000489719 SIVA1O15304 175 aa12.27□□□□□ -0.45
ABCF3-217ENST00000489719 FHITP49789 147 aa12.27□□□□□ -0.45
ABCF3-217ENST00000489719 K7EQD1 137 aa12.26□□□□□ -0.45
ABCF3-217ENST00000489719 BCL2L11O43521 198 aa12.26□□□□□ -0.45
ABCF3-217ENST00000489719 NXPH4O95158 308 aa12.26□□□□□ -0.45
ABCF3-217ENST00000489719 S100A4P26447 101 aaKnown RBP12.26□□□□□ -0.45
ABCF3-217ENST00000489719 TNP2Q05952 138 aa12.26□□□□□ -0.45
ABCF3-217ENST00000489719 SFT2D1Q8WV19 159 aa12.26□□□□□ -0.45
ABCF3-217ENST00000489719 TXNDC17Q9BRA2 123 aa12.26□□□□□ -0.45
ABCF3-217ENST00000489719 ZFP30Q9Y2G7 519 aa12.26□□□□□ -0.45
ABCF3-217ENST00000489719 MUC4Q99102 2169 aa12.25□□□□□ -0.45
ABCF3-217ENST00000489719 CIDEAO60543 219 aa12.25□□□□□ -0.45
ABCF3-217ENST00000489719 PFDN1O60925 122 aa12.25□□□□□ -0.45
ABCF3-217ENST00000489719 BTF3P20290 206 aaKnown RBP12.25□□□□□ -0.45
ABCF3-217ENST00000489719 UBE2G1P62253 170 aa12.25□□□□□ -0.45
ABCF3-217ENST00000489719 FAM213BQ8TBF2 198 aa12.25□□□□□ -0.45
ABCF3-217ENST00000489719 TCEAL7Q9BRU2 100 aa12.25□□□□□ -0.45
ABCF3-217ENST00000489719 TMUB2Q71RG4 321 aa12.24□□□□□ -0.45
ABCF3-217ENST00000489719 SH2D6Q7Z4S9 175 aa12.24□□□□□ -0.45
ABCF3-217ENST00000489719 MBD3L1Q8WWY6 194 aa12.24□□□□□ -0.45
ABCF3-217ENST00000489719 PTH2Q96A98 100 aa12.24□□□□□ -0.45
ABCF3-217ENST00000489719 FMC1Q96HJ9 113 aa12.24□□□□□ -0.45
ABCF3-217ENST00000489719 C9orf85Q96MD7 179 aa12.24□□□□□ -0.45
ABCF3-217ENST00000489719 TRAV9-2A0A087WT02 112 aa12.23□□□□□ -0.45
ABCF3-217ENST00000489719 RS1O15537 224 aa12.23□□□□□ -0.45
ABCF3-217ENST00000489719 PAGE4O60829 102 aa12.23□□□□□ -0.45
ABCF3-217ENST00000489719 CFAP126Q5VTH2 177 aa12.23□□□□□ -0.45
ABCF3-217ENST00000489719 DPPA3Q6W0C5 159 aa12.23□□□□□ -0.45
ABCF3-217ENST00000489719 Q86TA4 180 aa12.23□□□□□ -0.45
ABCF3-217ENST00000489719 KRTAP1-5Q9BYS1 174 aa12.23□□□□□ -0.45
ABCF3-217ENST00000489719 IGKV3D-20A0A0C4DH25 116 aa12.22□□□□□ -0.45
ABCF3-217ENST00000489719 PGPEP1LA6NFU8 196 aa12.22□□□□□ -0.45
ABCF3-217ENST00000489719 B4DEV8 164 aa12.22□□□□□ -0.45
ABCF3-217ENST00000489719 RNASE3P12724 160 aaKnown RBP12.22□□□□□ -0.45
ABCF3-217ENST00000489719 GATA1P15976 413 aaPredicted RBP12.22□□□□□ -0.45
ABCF3-217ENST00000489719 ASIPP42127 132 aa12.22□□□□□ -0.45
ABCF3-217ENST00000489719 NHLRC2Q8NBF2 726 aa12.22□□□□□ -0.45
ABCF3-217ENST00000489719 PRADC1Q9BSG0 188 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms