RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 KIAA1549LQ6ZVL6 1849 aa1.17□□□□□ -2.22
XRN1-213ENST00000489241 TMEM30CPA0ZSE6 113 aa1.17□□□□□ -2.22
XRN1-213ENST00000489241 IGF2P01344 180 aa1.17□□□□□ -2.22
XRN1-213ENST00000489241 IGLC6P0CF74 106 aa1.17□□□□□ -2.22
XRN1-213ENST00000489241 S100A12P80511 92 aa1.17□□□□□ -2.22
XRN1-213ENST00000489241 LYPD5Q6UWN5 251 aa1.17□□□□□ -2.22
XRN1-213ENST00000489241 Q8N6K4 173 aa1.17□□□□□ -2.22
XRN1-213ENST00000489241 LSM2Q9Y333 95 aaKnown RBP1.17□□□□□ -2.22
XRN1-213ENST00000489241 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.17□□□□□ -2.22
XRN1-213ENST00000489241 TSPAN19P0C672 248 aa1.16□□□□□ -2.22
XRN1-213ENST00000489241 LINC00694P0DN24 101 aa1.16□□□□□ -2.22
XRN1-213ENST00000489241 IL7P13232 177 aa1.16□□□□□ -2.22
XRN1-213ENST00000489241 RHOHQ15669 191 aa1.16□□□□□ -2.22
XRN1-213ENST00000489241 MMGT1Q8N4V1 131 aa1.16□□□□□ -2.22
XRN1-213ENST00000489241 MRPL36Q9P0J6 103 aaKnown RBP1.16□□□□□ -2.22
XRN1-213ENST00000489241 CTTNBP2Q8WZ74 1663 aa1.16□□□□□ -2.22
XRN1-213ENST00000489241 DISP2A7MBM2 1401 aa1.15□□□□□ -2.22
XRN1-213ENST00000489241 VIRMAQ69YN4 1812 aaKnown RBP1.15□□□□□ -2.22
XRN1-213ENST00000489241 SNRNP200O75643 2136 aaKnown RBP1.15□□□□□ -2.23
XRN1-213ENST00000489241 ASCC3Q8N3C0 2202 aaKnown RBP1.15□□□□□ -2.23
XRN1-213ENST00000489241 FAM236AA0A1B0GUQ0 79 aa1.15□□□□□ -2.23
XRN1-213ENST00000489241 FAM236BA0A1B0GV22 79 aa1.15□□□□□ -2.23
XRN1-213ENST00000489241 M0R2Z0 102 aa1.15□□□□□ -2.23
XRN1-213ENST00000489241 TPST1O60507 370 aa1.15□□□□□ -2.23
XRN1-213ENST00000489241 RBP4P02753 201 aa1.15□□□□□ -2.23
XRN1-213ENST00000489241 NCS1P62166 190 aa1.15□□□□□ -2.23
XRN1-213ENST00000489241 SNX29P2Q8IUI4 249 aa1.15□□□□□ -2.23
XRN1-213ENST00000489241 MYH1P12882 1939 aa1.15□□□□□ -2.23
XRN1-213ENST00000489241 PRG4Q92954 1404 aaPredicted RBP1.15□□□□□ -2.23
XRN1-213ENST00000489241 NINQ8N4C6 2090 aa1.14□□□□□ -2.23
XRN1-213ENST00000489241 CNTRLQ7Z7A1 2325 aa1.14□□□□□ -2.23
XRN1-213ENST00000489241 A0A0G2JMM0 328 aa1.14□□□□□ -2.23
XRN1-213ENST00000489241 COX4I1P13073 169 aa1.14□□□□□ -2.23
XRN1-213ENST00000489241 SLC25A26Q70HW3 274 aa1.14□□□□□ -2.23
XRN1-213ENST00000489241 TSTD1Q8NFU3 115 aa1.14□□□□□ -2.23
XRN1-213ENST00000489241 YPEL1O60688 119 aa1.13□□□□□ -2.23
XRN1-213ENST00000489241 POLR2JP52435 117 aaKnown RBP1.13□□□□□ -2.23
XRN1-213ENST00000489241 IQCJQ1A5X6 159 aa1.13□□□□□ -2.23
XRN1-213ENST00000489241 ATP11AUNQ6ZP68 121 aa1.13□□□□□ -2.23
XRN1-213ENST00000489241 Q6ZQY7 126 aa1.13□□□□□ -2.23
XRN1-213ENST00000489241 CTAGE3PQ8IX95 158 aa1.13□□□□□ -2.23
XRN1-213ENST00000489241 ATP6V0E2Q8NHE4 81 aa1.13□□□□□ -2.23
XRN1-213ENST00000489241 DMAC1Q96GE9 116 aa1.13□□□□□ -2.23
XRN1-213ENST00000489241 CCL19Q99731 98 aa1.13□□□□□ -2.23
XRN1-213ENST00000489241 TAS2R8Q9NYW2 309 aa1.13□□□□□ -2.23
XRN1-213ENST00000489241 MRPL35Q9NZE8 188 aaKnown RBP1.13□□□□□ -2.23
XRN1-213ENST00000489241 PTPRDP23468 1912 aa1.13□□□□□ -2.23
XRN1-213ENST00000489241 UHRF1BP1LA0JNW5 1464 aa1.12□□□□□ -2.23
XRN1-213ENST00000489241 ANK1P16157 1881 aa1.12□□□□□ -2.23
XRN1-213ENST00000489241 FANCMQ8IYD8 2048 aa1.12□□□□□ -2.23
XRN1-213ENST00000489241 KIDINS220Q9ULH0 1771 aa1.12□□□□□ -2.23
XRN1-213ENST00000489241 TRBV20-1A0A075B6N2 111 aa1.12□□□□□ -2.23
XRN1-213ENST00000489241 TRBV30A0A0K0K1B3 111 aa1.12□□□□□ -2.23
XRN1-213ENST00000489241 J3QR89 54 aa1.12□□□□□ -2.23
XRN1-213ENST00000489241 M0R129 80 aa1.12□□□□□ -2.23
XRN1-213ENST00000489241 M0R2P5 195 aa1.12□□□□□ -2.23
XRN1-213ENST00000489241 PRB4P10163 310 aaPredicted RBP1.12□□□□□ -2.23
XRN1-213ENST00000489241 Q86TA4 180 aa1.12□□□□□ -2.23
XRN1-213ENST00000489241 ATG5Q9H1Y0 275 aa1.12□□□□□ -2.23
XRN1-213ENST00000489241 NOP16Q9Y3C1 178 aaKnown RBP1.12□□□□□ -2.23
XRN1-213ENST00000489241 MED12Q93074 2177 aa1.12□□□□□ -2.23
XRN1-213ENST00000489241 TRPM7Q96QT4 1865 aa1.12□□□□□ -2.23
XRN1-213ENST00000489241 CDK5RAP2Q96SN8 1893 aa1.12□□□□□ -2.23
XRN1-213ENST00000489241 LRP5O75197 1615 aa1.11□□□□□ -2.23
XRN1-213ENST00000489241 TRAV17A0A0B4J275 112 aa1.11□□□□□ -2.23
XRN1-213ENST00000489241 NBDYA0A0U1RRE5 68 aa1.11□□□□□ -2.23
XRN1-213ENST00000489241 LOC101927531A0A1B0GV80 90 aa1.11□□□□□ -2.23
XRN1-213ENST00000489241 NCR2O95944 276 aa1.11□□□□□ -2.23
XRN1-213ENST00000489241 HMGN1P05114 100 aa1.11□□□□□ -2.23
XRN1-213ENST00000489241 XAF1Q6GPH4 301 aa1.11□□□□□ -2.23
XRN1-213ENST00000489241 UNQ5815/PRO19632Q6UWF5 114 aa1.11□□□□□ -2.23
XRN1-213ENST00000489241 DEFB132Q7Z7B7 95 aa1.11□□□□□ -2.23
XRN1-213ENST00000489241 ZGRF1Q86YA3 2104 aa1.11□□□□□ -2.23
XRN1-213ENST00000489241 TCEAL4Q96EI5 215 aa1.11□□□□□ -2.23
XRN1-213ENST00000489241 PFDN5Q99471 154 aa1.11□□□□□ -2.23
XRN1-213ENST00000489241 SOGA1O94964 1423 aa1.11□□□□□ -2.23
XRN1-213ENST00000489241 CCDC171Q6TFL3 1326 aa1.11□□□□□ -2.23
XRN1-213ENST00000489241 ERCC6Q03468 1493 aa1.11□□□□□ -2.23
XRN1-213ENST00000489241 CPDO75976 1380 aa1.1□□□□□ -2.23
XRN1-213ENST00000489241 A0A1W2PPM0 123 aa1.1□□□□□ -2.23
XRN1-213ENST00000489241 K7ERU9 68 aa1.1□□□□□ -2.23
XRN1-213ENST00000489241 FXYD3Q14802 87 aa1.1□□□□□ -2.23
XRN1-213ENST00000489241 FAM107BQ9H098 131 aa1.1□□□□□ -2.23
XRN1-213ENST00000489241 TPT1P8Q9HAU6 139 aa1.1□□□□□ -2.23
XRN1-213ENST00000489241 TENM1Q9UKZ4 2725 aa1.09□□□□□ -2.23
XRN1-213ENST00000489241 TRAV2A0A0B4J234 112 aa1.09□□□□□ -2.23
XRN1-213ENST00000489241 CXorf51AA0A1B0GTR3 108 aa1.09□□□□□ -2.23
XRN1-213ENST00000489241 HIGD1CA8MV81 97 aa1.09□□□□□ -2.23
XRN1-213ENST00000489241 J3QLW9 94 aa1.09□□□□□ -2.23
XRN1-213ENST00000489241 NPFFO15130 113 aa1.09□□□□□ -2.23
XRN1-213ENST00000489241 TFF1P04155 84 aa1.09□□□□□ -2.23
XRN1-213ENST00000489241 RPS25P62851 125 aaKnown RBP1.09□□□□□ -2.23
XRN1-213ENST00000489241 DYNLRB2Q8TF09 96 aa1.09□□□□□ -2.23
XRN1-213ENST00000489241 PPDPFLQ8WWR9 84 aa1.09□□□□□ -2.23
XRN1-213ENST00000489241 LINC00208Q96KT6 92 aa1.09□□□□□ -2.23
XRN1-213ENST00000489241 HELZP42694 1942 aaKnown RBP1.09□□□□□ -2.24
XRN1-213ENST00000489241 ZCCHC6Q5VYS8 1495 aaKnown RBP1.08□□□□□ -2.24
XRN1-213ENST00000489241 TRBV10-1A0A0K0K1A3 114 aa1.08□□□□□ -2.24
XRN1-213ENST00000489241 NDUFA2O43678 99 aa1.08□□□□□ -2.24
XRN1-213ENST00000489241 CAV3P56539 151 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms