RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 WI2-2373I1.2A0A1W2PRP0 233 aa6.94□□□□□ -1.3
EXOSC1-211ENST00000489158 MRPS12O15235 138 aaKnown RBP6.94□□□□□ -1.3
EXOSC1-211ENST00000489158 ATP6V0E1O15342 81 aa6.94□□□□□ -1.3
EXOSC1-211ENST00000489158 IGHV4-59P01825 116 aa6.94□□□□□ -1.3
EXOSC1-211ENST00000489158 CRIP2P52943 208 aaPredicted RBP6.94□□□□□ -1.3
EXOSC1-211ENST00000489158 FXYD2P54710 66 aa6.94□□□□□ -1.3
EXOSC1-211ENST00000489158 TWIST1Q15672 202 aa6.94□□□□□ -1.3
EXOSC1-211ENST00000489158 TTC9CQ8N5M4 171 aa6.94□□□□□ -1.3
EXOSC1-211ENST00000489158 TMEM86BQ8N661 226 aa6.94□□□□□ -1.3
EXOSC1-211ENST00000489158 TTTY13Q9BZ97 58 aa6.94□□□□□ -1.3
EXOSC1-211ENST00000489158 CHTOPQ9Y3Y2 248 aaKnown RBP6.94□□□□□ -1.3
EXOSC1-211ENST00000489158 K7ERJ3 54 aa6.94□□□□□ -1.3
EXOSC1-211ENST00000489158 GNG7O60262 68 aa6.94□□□□□ -1.3
EXOSC1-211ENST00000489158 CIDEAO60543 219 aa6.94□□□□□ -1.3
EXOSC1-211ENST00000489158 IL4P05112 153 aa6.94□□□□□ -1.3
EXOSC1-211ENST00000489158 SMIM17P0DL12 118 aa6.94□□□□□ -1.3
EXOSC1-211ENST00000489158 SAMD13Q5VXD3 122 aa6.94□□□□□ -1.3
EXOSC1-211ENST00000489158 ZNF491Q8N8L2 437 aa6.94□□□□□ -1.3
EXOSC1-211ENST00000489158 YAE1D1Q9NRH1 226 aa6.94□□□□□ -1.3
EXOSC1-211ENST00000489158 ZNF580Q9UK33 172 aa6.94□□□□□ -1.3
EXOSC1-211ENST00000489158 VPREB3Q9UKI3 123 aa6.94□□□□□ -1.3
EXOSC1-211ENST00000489158 TEX48A0A1B0GUV7 120 aa6.93□□□□□ -1.3
EXOSC1-211ENST00000489158 K7EIM0 57 aa6.93□□□□□ -1.3
EXOSC1-211ENST00000489158 KLK9Q2XQG4 91 aa6.93□□□□□ -1.3
EXOSC1-211ENST00000489158 RNF125Q96EQ8 232 aa6.93□□□□□ -1.3
EXOSC1-211ENST00000489158 KLK9Q9UKQ9 250 aa6.93□□□□□ -1.3
EXOSC1-211ENST00000489158 S4R3C0 116 aa6.93□□□□□ -1.3
EXOSC1-211ENST00000489158 FLNAP21333 2647 aaKnown RBP6.93□□□□□ -1.3
EXOSC1-211ENST00000489158 IGKV2-40A0A087WW87 121 aaPredicted RBP6.92□□□□□ -1.3
EXOSC1-211ENST00000489158 GAS8-AS1O95177 125 aa6.92□□□□□ -1.3
EXOSC1-211ENST00000489158 IGKV2D-40P01614 121 aaPredicted RBP6.92□□□□□ -1.3
EXOSC1-211ENST00000489158 EGR2P11161 476 aaPredicted RBP6.92□□□□□ -1.3
EXOSC1-211ENST00000489158 FAM110DQ8TAY7 271 aaPredicted RBP6.92□□□□□ -1.3
EXOSC1-211ENST00000489158 TMEM190Q8WZ59 177 aa6.92□□□□□ -1.3
EXOSC1-211ENST00000489158 AAMDCQ9H7C9 122 aa6.92□□□□□ -1.3
EXOSC1-211ENST00000489158 LINC01548A6NM66 108 aa6.92□□□□□ -1.3
EXOSC1-211ENST00000489158 HOXA3O43365 443 aaPredicted RBP6.92□□□□□ -1.3
EXOSC1-211ENST00000489158 IGHG2P01859 326 aa6.92□□□□□ -1.3
EXOSC1-211ENST00000489158 IGF1P05019 195 aa6.92□□□□□ -1.3
EXOSC1-211ENST00000489158 LEPP41159 167 aa6.92□□□□□ -1.3
EXOSC1-211ENST00000489158 ZNF48Q96MX3 618 aaPredicted RBP6.92□□□□□ -1.3
EXOSC1-211ENST00000489158 CHAC1Q9BUX1 264 aa6.92□□□□□ -1.3
EXOSC1-211ENST00000489158 MSRB1Q9NZV6 116 aa6.92□□□□□ -1.3
EXOSC1-211ENST00000489158 HIGD1BQ9P298 99 aa6.92□□□□□ -1.3
EXOSC1-211ENST00000489158 LINC00527Q9UJ94 153 aa6.92□□□□□ -1.3
EXOSC1-211ENST00000489158 HHLA3Q9XRX5 114 aa6.92□□□□□ -1.3
EXOSC1-211ENST00000489158 IGLV11-55A0A075B6I3 123 aa6.91□□□□□ -1.3
EXOSC1-211ENST00000489158 FBLL1A6NHQ2 334 aaKnown RBP6.91□□□□□ -1.3
EXOSC1-211ENST00000489158 G3V318 75 aa6.91□□□□□ -1.3
EXOSC1-211ENST00000489158 K7EMI3 77 aa6.91□□□□□ -1.3
EXOSC1-211ENST00000489158 PRSS1P07477 247 aa6.91□□□□□ -1.3
EXOSC1-211ENST00000489158 ZNF80P51504 273 aaPredicted RBP6.91□□□□□ -1.3
EXOSC1-211ENST00000489158 BLCAPP62952 87 aa6.91□□□□□ -1.3
EXOSC1-211ENST00000489158 ODF1Q14990 250 aa6.91□□□□□ -1.3
EXOSC1-211ENST00000489158 GTSCR1Q86UQ5 136 aa6.91□□□□□ -1.3
EXOSC1-211ENST00000489158 RNF185Q96GF1 192 aa6.91□□□□□ -1.3
EXOSC1-211ENST00000489158 GTSF1LQ9H1H1 148 aa6.91□□□□□ -1.3
EXOSC1-211ENST00000489158 MAP1LC3AQ9H492 121 aa6.91□□□□□ -1.3
EXOSC1-211ENST00000489158 ZMAT4Q9H898 229 aa6.91□□□□□ -1.3
EXOSC1-211ENST00000489158 TLN2Q9Y4G6 2542 aa6.91□□□□□ -1.3
EXOSC1-211ENST00000489158 H3BUA1 57 aa6.91□□□□□ -1.3
EXOSC1-211ENST00000489158 BRI3O95415 125 aa6.91□□□□□ -1.3
EXOSC1-211ENST00000489158 AZU1P20160 251 aa6.91□□□□□ -1.3
EXOSC1-211ENST00000489158 EVI2AP22794 236 aa6.91□□□□□ -1.3
EXOSC1-211ENST00000489158 FCER1GP30273 86 aa6.91□□□□□ -1.3
EXOSC1-211ENST00000489158 Q8TAT8 98 aa6.91□□□□□ -1.3
EXOSC1-211ENST00000489158 PHLDA1Q8WV24 401 aaPredicted RBP6.91□□□□□ -1.3
EXOSC1-211ENST00000489158 PRR25Q96S07 402 aa6.91□□□□□ -1.3
EXOSC1-211ENST00000489158 VGLL1Q99990 258 aa6.91□□□□□ -1.3
EXOSC1-211ENST00000489158 NHP2Q9NX24 153 aaKnown RBP6.91□□□□□ -1.3
EXOSC1-211ENST00000489158 MYO9AB2RTY4 2548 aa6.9□□□□□ -1.3
EXOSC1-211ENST00000489158 TRBV25-1A0A075B6N4 114 aa6.9□□□□□ -1.3
EXOSC1-211ENST00000489158 TRAV41A0A0B4J266 112 aa6.9□□□□□ -1.3
EXOSC1-211ENST00000489158 IGKCP01834 107 aa6.9□□□□□ -1.3
EXOSC1-211ENST00000489158 PDE6HQ13956 83 aa6.9□□□□□ -1.3
EXOSC1-211ENST00000489158 C19orf54Q5BKX5 351 aa6.9□□□□□ -1.3
EXOSC1-211ENST00000489158 ZNF575Q86XF7 245 aa6.9□□□□□ -1.3
EXOSC1-211ENST00000489158 CEND1Q8N111 149 aa6.9□□□□□ -1.3
EXOSC1-211ENST00000489158 FANCD2OSQ96PS1 177 aa6.9□□□□□ -1.3
EXOSC1-211ENST00000489158 DUX5Q96PT3 197 aa6.9□□□□□ -1.3
EXOSC1-211ENST00000489158 SMR3AQ99954 134 aa6.9□□□□□ -1.3
EXOSC1-211ENST00000489158 AKAP9Q99996 3911 aa6.9□□□□□ -1.3
EXOSC1-211ENST00000489158 LINC01546A6NGU7 62 aa6.89□□□□□ -1.31
EXOSC1-211ENST00000489158 SCGB2A1O75556 95 aa6.89□□□□□ -1.31
EXOSC1-211ENST00000489158 IGLC6P0CF74 106 aa6.89□□□□□ -1.31
EXOSC1-211ENST00000489158 GATA1P15976 413 aaPredicted RBP6.89□□□□□ -1.31
EXOSC1-211ENST00000489158 WFDC2Q14508 124 aa6.89□□□□□ -1.31
EXOSC1-211ENST00000489158 IGFL4Q6B9Z1 124 aa6.89□□□□□ -1.31
EXOSC1-211ENST00000489158 SIGMAR1Q99720 223 aa6.89□□□□□ -1.31
EXOSC1-211ENST00000489158 ACANP16112 2415 aa6.89□□□□□ -1.31
EXOSC1-211ENST00000489158 SONP18583 2426 aaKnown RBP6.89□□□□□ -1.31
EXOSC1-211ENST00000489158 ZNF207O43670 478 aaKnown RBP6.89□□□□□ -1.31
EXOSC1-211ENST00000489158 TNFRSF6BO95407 300 aa6.89□□□□□ -1.31
EXOSC1-211ENST00000489158 ORM1P02763 201 aa6.89□□□□□ -1.31
EXOSC1-211ENST00000489158 SMAGPQ0VAQ4 97 aa6.89□□□□□ -1.31
EXOSC1-211ENST00000489158 Q6ZS46 218 aa6.89□□□□□ -1.31
EXOSC1-211ENST00000489158 COX8CQ7Z4L0 72 aa6.89□□□□□ -1.31
EXOSC1-211ENST00000489158 TMEM158Q8WZ71 300 aa6.89□□□□□ -1.31
EXOSC1-211ENST00000489158 ATP6V0BQ99437 205 aa6.89□□□□□ -1.31
EXOSC1-211ENST00000489158 TSSC4Q9Y5U2 329 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms