RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 TRAV4A0A0B4J268 109 aa10.7□□□□□ -0.7
ERGIC3-217ENST00000488935 TRBV7-9A0A0J9YWB2 115 aa10.7□□□□□ -0.7
ERGIC3-217ENST00000488935 C9JCJ5 164 aa10.7□□□□□ -0.7
ERGIC3-217ENST00000488935 IFNA5P01569 189 aa10.7□□□□□ -0.7
ERGIC3-217ENST00000488935 TYMSP04818 313 aa10.7□□□□□ -0.7
ERGIC3-217ENST00000488935 EVI2AP22794 236 aa10.7□□□□□ -0.7
ERGIC3-217ENST00000488935 RAB2AP61019 212 aa10.7□□□□□ -0.7
ERGIC3-217ENST00000488935 IQCF2Q8IXL9 164 aa10.7□□□□□ -0.7
ERGIC3-217ENST00000488935 NHLRC2Q8NBF2 726 aa10.7□□□□□ -0.7
ERGIC3-217ENST00000488935 SCGB1C1Q8TD33 95 aa10.7□□□□□ -0.7
ERGIC3-217ENST00000488935 MPC2O95563 127 aa10.69□□□□□ -0.7
ERGIC3-217ENST00000488935 KHDC3LQ587J8 217 aa10.69□□□□□ -0.7
ERGIC3-217ENST00000488935 DPPA3Q6W0C5 159 aa10.69□□□□□ -0.7
ERGIC3-217ENST00000488935 CMTM2Q8TAZ6 248 aa10.69□□□□□ -0.7
ERGIC3-217ENST00000488935 Q9HAA7 133 aa10.69□□□□□ -0.7
ERGIC3-217ENST00000488935 OTORQ9NRC9 128 aa10.69□□□□□ -0.7
ERGIC3-217ENST00000488935 KCNIP2Q9NS61 270 aa10.69□□□□□ -0.7
ERGIC3-217ENST00000488935 ALG5Q9Y673 324 aa10.69□□□□□ -0.7
ERGIC3-217ENST00000488935 M0R2P5 195 aa10.68□□□□□ -0.7
ERGIC3-217ENST00000488935 GCSHP23434 173 aa10.68□□□□□ -0.7
ERGIC3-217ENST00000488935 RPL12P30050 165 aaKnown RBP10.68□□□□□ -0.7
ERGIC3-217ENST00000488935 TMEM75Q8N9X5 138 aa10.68□□□□□ -0.7
ERGIC3-217ENST00000488935 TREM1Q9NP99 234 aa10.68□□□□□ -0.7
ERGIC3-217ENST00000488935 C11orf21Q9P2W6 132 aa10.68□□□□□ -0.7
ERGIC3-217ENST00000488935 MYCBP2O75592 4640 aa10.67□□□□□ -0.7
ERGIC3-217ENST00000488935 SSNA1O43805 119 aa10.67□□□□□ -0.7
ERGIC3-217ENST00000488935 IGHV3-30P01768 117 aa10.67□□□□□ -0.7
ERGIC3-217ENST00000488935 IGHV3-33P01772 117 aa10.67□□□□□ -0.7
ERGIC3-217ENST00000488935 ORM1P02763 201 aa10.67□□□□□ -0.7
ERGIC3-217ENST00000488935 IGHV3-30-3P0DP02 117 aa10.67□□□□□ -0.7
ERGIC3-217ENST00000488935 IGHV3-30-5P0DP03 117 aa10.67□□□□□ -0.7
ERGIC3-217ENST00000488935 GATA1P15976 413 aaPredicted RBP10.67□□□□□ -0.7
ERGIC3-217ENST00000488935 ZNF80P51504 273 aaPredicted RBP10.67□□□□□ -0.7
ERGIC3-217ENST00000488935 CYCSP99999 105 aaKnown RBP10.67□□□□□ -0.7
ERGIC3-217ENST00000488935 CDPF1Q6NVV7 123 aa10.67□□□□□ -0.7
ERGIC3-217ENST00000488935 TXNDC17Q9BRA2 123 aa10.67□□□□□ -0.7
ERGIC3-217ENST00000488935 PPT1P50897 306 aa10.66□□□□□ -0.7
ERGIC3-217ENST00000488935 TAS2R45P59539 299 aa10.66□□□□□ -0.7
ERGIC3-217ENST00000488935 TDRG1Q3Y452 100 aa10.66□□□□□ -0.7
ERGIC3-217ENST00000488935 Q8N3U1 123 aa10.66□□□□□ -0.7
ERGIC3-217ENST00000488935 FRZBQ92765 325 aa10.66□□□□□ -0.7
ERGIC3-217ENST00000488935 LENEPQ9Y5L5 61 aa10.66□□□□□ -0.7
ERGIC3-217ENST00000488935 TRAV21A0A0B4J279 112 aa10.65□□□□□ -0.7
ERGIC3-217ENST00000488935 IGHV3-38A0A0C4DH36 116 aa10.65□□□□□ -0.7
ERGIC3-217ENST00000488935 LRCOL1A6NCL2 159 aa10.65□□□□□ -0.7
ERGIC3-217ENST00000488935 PSCAO43653 123 aa10.65□□□□□ -0.7
ERGIC3-217ENST00000488935 SLC25A29Q8N8R3 303 aa10.65□□□□□ -0.7
ERGIC3-217ENST00000488935 FAM30AQ9NZY2 134 aa10.65□□□□□ -0.7
ERGIC3-217ENST00000488935 DMBT1Q9UGM3 2413 aaPredicted RBP10.64□□□□□ -0.71
ERGIC3-217ENST00000488935 IGLV5-52A0A0A0MRZ9 124 aa10.64□□□□□ -0.71
ERGIC3-217ENST00000488935 A0A1W2PPV4 95 aa10.64□□□□□ -0.71
ERGIC3-217ENST00000488935 ACOT6Q3I5F7 207 aaPredicted RBP10.64□□□□□ -0.71
ERGIC3-217ENST00000488935 OR10G9Q8NGN4 311 aa10.64□□□□□ -0.71
ERGIC3-217ENST00000488935 OR10G7Q8NGN6 311 aa10.64□□□□□ -0.71
ERGIC3-217ENST00000488935 TMED6Q8WW62 240 aa10.64□□□□□ -0.71
ERGIC3-217ENST00000488935 ASB13Q8WXK3 278 aa10.64□□□□□ -0.71
ERGIC3-217ENST00000488935 SDF2L1Q9HCN8 221 aa10.64□□□□□ -0.71
ERGIC3-217ENST00000488935 ARL14EPLP0DKL9 152 aa10.63□□□□□ -0.71
ERGIC3-217ENST00000488935 WFDC2Q14508 124 aa10.63□□□□□ -0.71
ERGIC3-217ENST00000488935 ZNF876PQ49A33 203 aa10.63□□□□□ -0.71
ERGIC3-217ENST00000488935 OR10J3Q5JRS4 329 aa10.63□□□□□ -0.71
ERGIC3-217ENST00000488935 CFAP126Q5VTH2 177 aa10.63□□□□□ -0.71
ERGIC3-217ENST00000488935 MED28Q9H204 178 aa10.63□□□□□ -0.71
ERGIC3-217ENST00000488935 PGPEP1LA6NFU8 196 aa10.62□□□□□ -0.71
ERGIC3-217ENST00000488935 FBLL1A6NHQ2 334 aaKnown RBP10.62□□□□□ -0.71
ERGIC3-217ENST00000488935 FAM74A1Q5RGS3 127 aa10.62□□□□□ -0.71
ERGIC3-217ENST00000488935 Q6ZSN1 163 aa10.62□□□□□ -0.71
ERGIC3-217ENST00000488935 RS1O15537 224 aa10.61□□□□□ -0.71
ERGIC3-217ENST00000488935 PQLC2Q6ZP29 291 aa10.61□□□□□ -0.71
ERGIC3-217ENST00000488935 PRNTQ86SH4 94 aa10.61□□□□□ -0.71
ERGIC3-217ENST00000488935 HSD17B11Q8NBQ5 300 aa10.61□□□□□ -0.71
ERGIC3-217ENST00000488935 Q9UF83 564 aa10.61□□□□□ -0.71
ERGIC3-217ENST00000488935 IBA57-AS1B1ANH7 110 aa10.6□□□□□ -0.71
ERGIC3-217ENST00000488935 LECT2O14960 151 aa10.6□□□□□ -0.71
ERGIC3-217ENST00000488935 GCGP01275 180 aa10.6□□□□□ -0.71
ERGIC3-217ENST00000488935 LINC01556Q5JQF7 62 aa10.6□□□□□ -0.71
ERGIC3-217ENST00000488935 ZNF506Q5JVG8 444 aa10.6□□□□□ -0.71
ERGIC3-217ENST00000488935 Q6ZNX1 250 aa10.6□□□□□ -0.71
ERGIC3-217ENST00000488935 C10orf126Q8N4M7 172 aa10.6□□□□□ -0.71
ERGIC3-217ENST00000488935 PSG8Q9UQ74 426 aa10.6□□□□□ -0.71
ERGIC3-217ENST00000488935 SRRM2Q9UQ35 2752 aaKnown RBP10.6□□□□□ -0.71
ERGIC3-217ENST00000488935 TRAV8-6A0A0B4J262 113 aa10.59□□□□□ -0.71
ERGIC3-217ENST00000488935 TCRAP04437 139 aa10.59□□□□□ -0.71
ERGIC3-217ENST00000488935 PET100P0DJ07 73 aa10.59□□□□□ -0.71
ERGIC3-217ENST00000488935 CDC34P49427 236 aaPredicted RBP10.59□□□□□ -0.71
ERGIC3-217ENST00000488935 SUMO1P63165 101 aaKnown RBP10.59□□□□□ -0.71
ERGIC3-217ENST00000488935 Q8N814 137 aa10.59□□□□□ -0.71
ERGIC3-217ENST00000488935 KCNS1Q96KK3 526 aa10.59□□□□□ -0.71
ERGIC3-217ENST00000488935 LINC00479Q96M42 142 aa10.59□□□□□ -0.71
ERGIC3-217ENST00000488935 JPT2Q9H910 190 aa10.59□□□□□ -0.71
ERGIC3-217ENST00000488935 TRAV34A0A0B4J273 112 aa10.58□□□□□ -0.72
ERGIC3-217ENST00000488935 IGLV2-11P01706 119 aa10.58□□□□□ -0.72
ERGIC3-217ENST00000488935 PFN1P07737 140 aaKnown RBP10.58□□□□□ -0.72
ERGIC3-217ENST00000488935 RNASE3P12724 160 aaKnown RBP10.58□□□□□ -0.72
ERGIC3-217ENST00000488935 GCHFRP30047 84 aa10.58□□□□□ -0.72
ERGIC3-217ENST00000488935 RAB24Q969Q5 203 aa10.58□□□□□ -0.72
ERGIC3-217ENST00000488935 C9orf85Q96MD7 179 aa10.58□□□□□ -0.72
ERGIC3-217ENST00000488935 PRADC1Q9BSG0 188 aa10.58□□□□□ -0.72
ERGIC3-217ENST00000488935 SH3BGRL3Q9H299 93 aa10.58□□□□□ -0.72
ERGIC3-217ENST00000488935 GAGE12JA6NER3 117 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms