RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 GIPP09681 153 aaPredicted RBP8.16□□□□□ -1.1
CCHCR1-215ENST00000488920 GYPEP15421 78 aa8.16□□□□□ -1.1
CCHCR1-215ENST00000488920 SUMO1P63165 101 aaKnown RBP8.16□□□□□ -1.1
CCHCR1-215ENST00000488920 SERF2P84101 59 aa8.16□□□□□ -1.1
CCHCR1-215ENST00000488920 INO80EQ8NBZ0 244 aaPredicted RBP8.16□□□□□ -1.1
CCHCR1-215ENST00000488920 OR4C5Q8NGB2 326 aa8.16□□□□□ -1.1
CCHCR1-215ENST00000488920 SUN5Q8TC36 379 aa8.16□□□□□ -1.1
CCHCR1-215ENST00000488920 MUC4Q99102 2169 aa8.16□□□□□ -1.1
CCHCR1-215ENST00000488920 ACTR3CQ9C0K3 210 aaPredicted RBP8.16□□□□□ -1.1
CCHCR1-215ENST00000488920 SDF2L1Q9HCN8 221 aa8.16□□□□□ -1.1
CCHCR1-215ENST00000488920 TNFRSF18Q9Y5U5 241 aa8.16□□□□□ -1.1
CCHCR1-215ENST00000488920 FXYD6-FXYD2A0A087WZ82 144 aa8.15□□□□□ -1.1
CCHCR1-215ENST00000488920 TRAV4A0A0B4J268 109 aa8.15□□□□□ -1.1
CCHCR1-215ENST00000488920 CXorf1O96002 111 aa8.15□□□□□ -1.1
CCHCR1-215ENST00000488920 BTF3P20290 206 aaKnown RBP8.15□□□□□ -1.1
CCHCR1-215ENST00000488920 SRIP30626 198 aa8.15□□□□□ -1.1
CCHCR1-215ENST00000488920 ZNF80P51504 273 aaPredicted RBP8.15□□□□□ -1.1
CCHCR1-215ENST00000488920 KRTAP10-2P60368 255 aa8.15□□□□□ -1.1
CCHCR1-215ENST00000488920 RPL7L1Q6DKI1 246 aaKnown RBP8.15□□□□□ -1.1
CCHCR1-215ENST00000488920 C5orf17Q8NAS9 161 aa8.15□□□□□ -1.1
CCHCR1-215ENST00000488920 PCNPQ8WW12 178 aaKnown RBP8.15□□□□□ -1.1
CCHCR1-215ENST00000488920 ASB13Q8WXK3 278 aa8.15□□□□□ -1.1
CCHCR1-215ENST00000488920 NDFIP1Q9BT67 221 aa8.15□□□□□ -1.1
CCHCR1-215ENST00000488920 KRTAP4-5Q9BYR2 181 aa8.15□□□□□ -1.1
CCHCR1-215ENST00000488920 EPDR1Q9UM22 224 aa8.15□□□□□ -1.1
CCHCR1-215ENST00000488920 TNFSF18Q9UNG2 199 aa8.15□□□□□ -1.1
CCHCR1-215ENST00000488920 PSG8Q9UQ74 426 aa8.15□□□□□ -1.1
CCHCR1-215ENST00000488920 LOC100131303A0A0U1RQF7 123 aa8.14□□□□□ -1.11
CCHCR1-215ENST00000488920 SERTM2A0A1B0GWG4 89 aa8.14□□□□□ -1.11
CCHCR1-215ENST00000488920 GGTLC3B5MD39 225 aa8.14□□□□□ -1.11
CCHCR1-215ENST00000488920 C9JCJ5 164 aa8.14□□□□□ -1.11
CCHCR1-215ENST00000488920 K7EQM0 130 aa8.14□□□□□ -1.11
CCHCR1-215ENST00000488920 PRNTQ86SH4 94 aa8.14□□□□□ -1.11
CCHCR1-215ENST00000488920 KCNS1Q96KK3 526 aa8.14□□□□□ -1.11
CCHCR1-215ENST00000488920 TMEM167BQ9NRX6 74 aa8.14□□□□□ -1.11
CCHCR1-215ENST00000488920 C11orf21Q9P2W6 132 aa8.14□□□□□ -1.11
CCHCR1-215ENST00000488920 ABCA13Q86UQ4 5058 aa8.13□□□□□ -1.11
CCHCR1-215ENST00000488920 BORCS7-ASMTA0A0B4J1R7 106 aa8.13□□□□□ -1.11
CCHCR1-215ENST00000488920 RNF222A6NCQ9 220 aa8.13□□□□□ -1.11
CCHCR1-215ENST00000488920 TAAR5O14804 337 aa8.13□□□□□ -1.11
CCHCR1-215ENST00000488920 GCGP01275 180 aa8.13□□□□□ -1.11
CCHCR1-215ENST00000488920 IGLV2-11P01706 119 aa8.13□□□□□ -1.11
CCHCR1-215ENST00000488920 ORM1P02763 201 aa8.13□□□□□ -1.11
CCHCR1-215ENST00000488920 Q6ZRN7 208 aaPredicted RBP8.13□□□□□ -1.11
CCHCR1-215ENST00000488920 OR2T35Q8NGX2 323 aa8.13□□□□□ -1.11
CCHCR1-215ENST00000488920 LINC00479Q96M42 142 aa8.13□□□□□ -1.11
CCHCR1-215ENST00000488920 HSPG2P98160 4391 aa8.13□□□□□ -1.11
CCHCR1-215ENST00000488920 LRP1BQ9NZR2 4599 aa8.12□□□□□ -1.11
CCHCR1-215ENST00000488920 TRAV9-2A0A087WT02 112 aa8.12□□□□□ -1.11
CCHCR1-215ENST00000488920 TRAV34A0A0B4J273 112 aa8.12□□□□□ -1.11
CCHCR1-215ENST00000488920 CDK2AP2O75956 126 aa8.12□□□□□ -1.11
CCHCR1-215ENST00000488920 FLI1Q01543 452 aaPredicted RBP8.12□□□□□ -1.11
CCHCR1-215ENST00000488920 ZNF726P1Q15940 193 aa8.12□□□□□ -1.11
CCHCR1-215ENST00000488920 ZNF876PQ49A33 203 aa8.12□□□□□ -1.11
CCHCR1-215ENST00000488920 WFDC10BQ8IUB3 73 aa8.12□□□□□ -1.11
CCHCR1-215ENST00000488920 CYB561D1Q8N8Q1 229 aa8.12□□□□□ -1.11
CCHCR1-215ENST00000488920 TMEM75Q8N9X5 138 aa8.12□□□□□ -1.11
CCHCR1-215ENST00000488920 TXNDC17Q9BRA2 123 aa8.12□□□□□ -1.11
CCHCR1-215ENST00000488920 LY96Q9Y6Y9 160 aa8.12□□□□□ -1.11
CCHCR1-215ENST00000488920 IGHV3-73A0A0B4J1V6 119 aa8.11□□□□□ -1.11
CCHCR1-215ENST00000488920 IFNA7P01567 189 aa8.11□□□□□ -1.11
CCHCR1-215ENST00000488920 PFN1P07737 140 aaKnown RBP8.11□□□□□ -1.11
CCHCR1-215ENST00000488920 GATA1P15976 413 aaPredicted RBP8.11□□□□□ -1.11
CCHCR1-215ENST00000488920 FUSP35637 526 aaKnown RBP eCLIP8.11□□□□□ -1.11
CCHCR1-215ENST00000488920 UBE2G2P60604 165 aa8.11□□□□□ -1.11
CCHCR1-215ENST00000488920 SMUG1Q53HV7 270 aa8.11□□□□□ -1.11
CCHCR1-215ENST00000488920 DPPA3Q6W0C5 159 aa8.11□□□□□ -1.11
CCHCR1-215ENST00000488920 NHLRC2Q8NBF2 726 aa8.11□□□□□ -1.11
CCHCR1-215ENST00000488920 A0A1W2PRE2 83 aa8.1□□□□□ -1.11
CCHCR1-215ENST00000488920 FBLL1A6NHQ2 334 aaKnown RBP8.1□□□□□ -1.11
CCHCR1-215ENST00000488920 RS1O15537 224 aa8.1□□□□□ -1.11
CCHCR1-215ENST00000488920 EVI2AP22794 236 aa8.1□□□□□ -1.11
CCHCR1-215ENST00000488920 FGF8P55075 233 aaPredicted RBP8.1□□□□□ -1.11
CCHCR1-215ENST00000488920 ZFP69Q49AA0 526 aa8.1□□□□□ -1.11
CCHCR1-215ENST00000488920 SAPCD1Q5SSQ6 148 aa8.1□□□□□ -1.11
CCHCR1-215ENST00000488920 CFAP126Q5VTH2 177 aa8.1□□□□□ -1.11
CCHCR1-215ENST00000488920 MAPKAPK5-AS1Q8N8E1 139 aa8.1□□□□□ -1.11
CCHCR1-215ENST00000488920 SLC25A29Q8N8R3 303 aa8.1□□□□□ -1.11
CCHCR1-215ENST00000488920 CTXND1A0A1B0GTU2 59 aa8.09□□□□□ -1.11
CCHCR1-215ENST00000488920 PGPEP1LA6NFU8 196 aa8.09□□□□□ -1.11
CCHCR1-215ENST00000488920 G3V3Q6 166 aa8.09□□□□□ -1.11
CCHCR1-215ENST00000488920 RGS21Q2M5E4 152 aa8.09□□□□□ -1.11
CCHCR1-215ENST00000488920 AKR1C8PQ5T2L2 129 aa8.09□□□□□ -1.11
CCHCR1-215ENST00000488920 SH2D6Q7Z4S9 175 aa8.09□□□□□ -1.11
CCHCR1-215ENST00000488920 NFE4Q86UQ8 179 aa8.09□□□□□ -1.11
CCHCR1-215ENST00000488920 C9orf85Q96MD7 179 aa8.09□□□□□ -1.11
CCHCR1-215ENST00000488920 MSRB1Q9NZV6 116 aa8.09□□□□□ -1.11
CCHCR1-215ENST00000488920 EREGO14944 169 aa8.08□□□□□ -1.12
CCHCR1-215ENST00000488920 ARPC5O15511 151 aa8.08□□□□□ -1.12
CCHCR1-215ENST00000488920 CRYGDP07320 174 aa8.08□□□□□ -1.12
CCHCR1-215ENST00000488920 DNAH10OSP0CZ25 163 aa8.08□□□□□ -1.12
CCHCR1-215ENST00000488920 RNASE3P12724 160 aaKnown RBP8.08□□□□□ -1.12
CCHCR1-215ENST00000488920 PPT1P50897 306 aa8.08□□□□□ -1.12
CCHCR1-215ENST00000488920 ZNF506Q5JVG8 444 aa8.08□□□□□ -1.12
CCHCR1-215ENST00000488920 CYTL1Q9NRR1 136 aa8.08□□□□□ -1.12
CCHCR1-215ENST00000488920 PGPEP1Q9NXJ5 209 aa8.08□□□□□ -1.12
CCHCR1-215ENST00000488920 ARL2-SNX15V9GYD0 113 aa8.08□□□□□ -1.12
CCHCR1-215ENST00000488920 IGKV3D-20A0A0C4DH25 116 aa8.07□□□□□ -1.12
CCHCR1-215ENST00000488920 FAM74A7A6NL05 159 aa8.07□□□□□ -1.12
CCHCR1-215ENST00000488920 FABP5P3A8MUU1 101 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms