RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 ZFP30Q9Y2G7 519 aa13.17□□□□□ -0.3
PTCD3-217ENST00000488801 IGHV4-4A0A075B6R2 117 aa13.16□□□□□ -0.3
PTCD3-217ENST00000488801 TYMSP04818 313 aa13.16□□□□□ -0.3
PTCD3-217ENST00000488801 DEFB130BP0DP73 79 aa13.16□□□□□ -0.3
PTCD3-217ENST00000488801 DEFB130AP0DP74 79 aa13.16□□□□□ -0.3
PTCD3-217ENST00000488801 AKR1C3P42330 323 aa13.16□□□□□ -0.3
PTCD3-217ENST00000488801 FAM159AQ6UWV7 190 aa13.16□□□□□ -0.3
PTCD3-217ENST00000488801 KMT2AQ03164 3969 aa13.15□□□□□ -0.3
PTCD3-217ENST00000488801 TRGV11A0A075B6L2 103 aa13.15□□□□□ -0.3
PTCD3-217ENST00000488801 BCL2P10415 239 aa13.15□□□□□ -0.3
PTCD3-217ENST00000488801 ZNF415Q09FC8 603 aa13.15□□□□□ -0.3
PTCD3-217ENST00000488801 Q6ZTI0 123 aa13.15□□□□□ -0.3
PTCD3-217ENST00000488801 LINC00476Q8WZB0 136 aa13.15□□□□□ -0.3
PTCD3-217ENST00000488801 ZC2HC1AQ96GY0 325 aa13.15□□□□□ -0.3
PTCD3-217ENST00000488801 FAM210BQ96KR6 192 aa13.15□□□□□ -0.3
PTCD3-217ENST00000488801 MDFICQ9P1T7 246 aa13.15□□□□□ -0.3
PTCD3-217ENST00000488801 IGHV3-16A0A0C4DH30 117 aa13.14□□□□□ -0.31
PTCD3-217ENST00000488801 IGLL5B9A064 214 aa13.14□□□□□ -0.31
PTCD3-217ENST00000488801 UBE2G1P62253 170 aa13.14□□□□□ -0.31
PTCD3-217ENST00000488801 MEF2BQ02080 365 aaPredicted RBP13.14□□□□□ -0.31
PTCD3-217ENST00000488801 LGALS9BQ3B8N2 356 aa13.14□□□□□ -0.31
PTCD3-217ENST00000488801 TMEM183AQ8IXX5 376 aa13.14□□□□□ -0.31
PTCD3-217ENST00000488801 KCNS1Q96KK3 526 aa13.14□□□□□ -0.31
PTCD3-217ENST00000488801 MLST8Q9BVC4 326 aa13.14□□□□□ -0.31
PTCD3-217ENST00000488801 ATP5G1P05496 136 aa13.13□□□□□ -0.31
PTCD3-217ENST00000488801 S100A9P06702 114 aaKnown RBP13.13□□□□□ -0.31
PTCD3-217ENST00000488801 CRIP1P50238 77 aa13.13□□□□□ -0.31
PTCD3-217ENST00000488801 BLOC1S1P78537 153 aa13.13□□□□□ -0.31
PTCD3-217ENST00000488801 SDF2L1Q9HCN8 221 aa13.13□□□□□ -0.31
PTCD3-217ENST00000488801 NAGKQ9UJ70 344 aa13.13□□□□□ -0.31
PTCD3-217ENST00000488801 IFNA1P01562 189 aa13.12□□□□□ -0.31
PTCD3-217ENST00000488801 TAGLN2P37802 199 aaKnown RBP13.12□□□□□ -0.31
PTCD3-217ENST00000488801 ZNF674Q2M3X9 581 aa13.12□□□□□ -0.31
PTCD3-217ENST00000488801 IGKV3D-20A0A0C4DH25 116 aa13.11□□□□□ -0.31
PTCD3-217ENST00000488801 GAGE12BA1L429 117 aa13.11□□□□□ -0.31
PTCD3-217ENST00000488801 GNRH2O43555 120 aa13.11□□□□□ -0.31
PTCD3-217ENST00000488801 GAGE7O76087 117 aa13.11□□□□□ -0.31
PTCD3-217ENST00000488801 GAGE12FP0CL80 117 aa13.11□□□□□ -0.31
PTCD3-217ENST00000488801 GAGE12GP0CL81 117 aa13.11□□□□□ -0.31
PTCD3-217ENST00000488801 GAGE12IP0CL82 117 aa13.11□□□□□ -0.31
PTCD3-217ENST00000488801 SPXQ9BT56 116 aa13.11□□□□□ -0.31
PTCD3-217ENST00000488801 DERL1Q9BUN8 251 aa13.11□□□□□ -0.31
PTCD3-217ENST00000488801 TRGV1A0A0A0MS02 117 aa13.1□□□□□ -0.31
PTCD3-217ENST00000488801 FABP5P3A8MUU1 101 aa13.1□□□□□ -0.31
PTCD3-217ENST00000488801 RPL35P42766 123 aaKnown RBP13.1□□□□□ -0.31
PTCD3-217ENST00000488801 LGALS9CQ6DKI2 356 aa13.1□□□□□ -0.31
PTCD3-217ENST00000488801 ZNF575Q86XF7 245 aa13.1□□□□□ -0.31
PTCD3-217ENST00000488801 RASL10AQ92737 203 aa13.1□□□□□ -0.31
PTCD3-217ENST00000488801 C9orf85Q96MD7 179 aa13.1□□□□□ -0.31
PTCD3-217ENST00000488801 VAX2Q9UIW0 290 aa13.1□□□□□ -0.31
PTCD3-217ENST00000488801 PDE6DO43924 150 aa13.09□□□□□ -0.31
PTCD3-217ENST00000488801 SH2D1AO60880 128 aa13.09□□□□□ -0.31
PTCD3-217ENST00000488801 HTN3P15516 51 aa13.09□□□□□ -0.31
PTCD3-217ENST00000488801 HOXA5P20719 270 aa13.09□□□□□ -0.31
PTCD3-217ENST00000488801 TMEM88Q6PEY1 159 aa13.09□□□□□ -0.31
PTCD3-217ENST00000488801 NDUFAF3Q9BU61 184 aa13.09□□□□□ -0.31
PTCD3-217ENST00000488801 MRPL16Q9NX20 251 aaKnown RBP13.09□□□□□ -0.31
PTCD3-217ENST00000488801 RNASE3P12724 160 aaKnown RBP13.08□□□□□ -0.32
PTCD3-217ENST00000488801 DNLZQ5SXM8 178 aa13.08□□□□□ -0.32
PTCD3-217ENST00000488801 FAM162BQ5T6X4 162 aa13.08□□□□□ -0.32
PTCD3-217ENST00000488801 TEX261Q6UWH6 196 aa13.08□□□□□ -0.32
PTCD3-217ENST00000488801 IGLV2-8P01709 118 aa13.07□□□□□ -0.32
PTCD3-217ENST00000488801 LINC01559Q495D7 138 aa13.07□□□□□ -0.32
PTCD3-217ENST00000488801 NHLRC2Q8NBF2 726 aa13.07□□□□□ -0.32
PTCD3-217ENST00000488801 TRBV20OR9-2A0A075B6H5 130 aa13.06□□□□□ -0.32
PTCD3-217ENST00000488801 KRBOX1C9JBD0 128 aa13.06□□□□□ -0.32
PTCD3-217ENST00000488801 F5H768 121 aa13.06□□□□□ -0.32
PTCD3-217ENST00000488801 M0R2P5 195 aa13.06□□□□□ -0.32
PTCD3-217ENST00000488801 NDUFS6O75380 124 aaKnown RBP13.06□□□□□ -0.32
PTCD3-217ENST00000488801 ZNF506Q5JVG8 444 aa13.06□□□□□ -0.32
PTCD3-217ENST00000488801 BAGE2Q86Y30 109 aa13.06□□□□□ -0.32
PTCD3-217ENST00000488801 C15orf53Q8NAA6 179 aa13.06□□□□□ -0.32
PTCD3-217ENST00000488801 PTH2Q96A98 100 aa13.06□□□□□ -0.32
PTCD3-217ENST00000488801 TRGV2A0A075B6R0 118 aa13.05□□□□□ -0.32
PTCD3-217ENST00000488801 CENPWQ5EE01 88 aa13.05□□□□□ -0.32
PTCD3-217ENST00000488801 POM121L12Q8N7R1 296 aa13.05□□□□□ -0.32
PTCD3-217ENST00000488801 SMIM12Q96EX1 92 aa13.05□□□□□ -0.32
PTCD3-217ENST00000488801 RBFOX3A6NFN3 312 aa13.04□□□□□ -0.32
PTCD3-217ENST00000488801 B4DEV8 164 aa13.03□□□□□ -0.32
PTCD3-217ENST00000488801 TMEM250H0YL14 139 aa13.03□□□□□ -0.32
PTCD3-217ENST00000488801 H3BNG1 76 aa13.03□□□□□ -0.32
PTCD3-217ENST00000488801 IL36BQ9NZH7 164 aa13.03□□□□□ -0.32
PTCD3-217ENST00000488801 LY6G6CO95867 125 aa13.02□□□□□ -0.33
PTCD3-217ENST00000488801 ORM1P02763 201 aa13.02□□□□□ -0.33
PTCD3-217ENST00000488801 CXCL1P09341 107 aa13.02□□□□□ -0.33
PTCD3-217ENST00000488801 VSIG2Q96IQ7 327 aa13.02□□□□□ -0.33
PTCD3-217ENST00000488801 FAM210AQ96ND0 272 aa13.02□□□□□ -0.33
PTCD3-217ENST00000488801 MED9Q9NWA0 146 aa13.02□□□□□ -0.33
PTCD3-217ENST00000488801 TRAV26-1A0A087WT03 109 aa13.01□□□□□ -0.33
PTCD3-217ENST00000488801 TRAV4A0A0B4J268 109 aa13.01□□□□□ -0.33
PTCD3-217ENST00000488801 RAB19A4D1S5 217 aa13.01□□□□□ -0.33
PTCD3-217ENST00000488801 M0R036 132 aa13.01□□□□□ -0.33
PTCD3-217ENST00000488801 ASIPP42127 132 aa13.01□□□□□ -0.33
PTCD3-217ENST00000488801 FHL2Q14192 279 aa13.01□□□□□ -0.33
PTCD3-217ENST00000488801 PIK3CD-AS1Q5SR53 167 aa13.01□□□□□ -0.33
PTCD3-217ENST00000488801 SCRT2Q9NQ03 307 aa13.01□□□□□ -0.33
PTCD3-217ENST00000488801 C9JCJ5 164 aa13□□□□□ -0.33
PTCD3-217ENST00000488801 GNG4P50150 75 aa13□□□□□ -0.33
PTCD3-217ENST00000488801 TOR2AQ5JU69 321 aa13□□□□□ -0.33
PTCD3-217ENST00000488801 ZNF479Q96JC4 524 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms