RNA–Protein interactions for RNA: ENST00000488774.1

PTPRD-212, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 3

Gene PTPRD, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-212ENST00000488774 CBY3A6NI87 242 aa4.53□□□□□ -1.68
PTPRD-212ENST00000488774 LYRM9A8MSI8 78 aa4.53□□□□□ -1.68
PTPRD-212ENST00000488774 TEX46H3BTG2 121 aa4.53□□□□□ -1.68
PTPRD-212ENST00000488774 PFDN1O60925 122 aa4.53□□□□□ -1.68
PTPRD-212ENST00000488774 GCGP01275 180 aa4.53□□□□□ -1.68
PTPRD-212ENST00000488774 IGLV2-8P01709 118 aa4.53□□□□□ -1.68
PTPRD-212ENST00000488774 IGHV3-53P01767 116 aa4.53□□□□□ -1.68
PTPRD-212ENST00000488774 NMBP08949 121 aa4.53□□□□□ -1.68
PTPRD-212ENST00000488774 SFTA3P0C7M3 94 aa4.53□□□□□ -1.68
PTPRD-212ENST00000488774 RNASE3P12724 160 aaKnown RBP4.53□□□□□ -1.68
PTPRD-212ENST00000488774 TPT1P13693 172 aaKnown RBP4.53□□□□□ -1.68
PTPRD-212ENST00000488774 TCL1AP56279 114 aa4.53□□□□□ -1.68
PTPRD-212ENST00000488774 DAZ2Q13117 558 aaKnown RBP4.53□□□□□ -1.68
PTPRD-212ENST00000488774 CYB561D1Q8N8Q1 229 aa4.53□□□□□ -1.68
PTPRD-212ENST00000488774 RXFP4Q8TDU9 374 aa4.53□□□□□ -1.68
PTPRD-212ENST00000488774 ZNF479Q96JC4 524 aa4.53□□□□□ -1.68
PTPRD-212ENST00000488774 C20orf144Q9BQM9 153 aa4.53□□□□□ -1.68
PTPRD-212ENST00000488774 PYGO2Q9BRQ0 406 aa4.53□□□□□ -1.68
PTPRD-212ENST00000488774 ATG101Q9BSB4 218 aa4.53□□□□□ -1.68
PTPRD-212ENST00000488774 JPT2Q9H910 190 aa4.53□□□□□ -1.68
PTPRD-212ENST00000488774 NAGKQ9UJ70 344 aa4.53□□□□□ -1.68
PTPRD-212ENST00000488774 TIMM8BQ9Y5J9 83 aaPredicted RBP4.53□□□□□ -1.68
PTPRD-212ENST00000488774 TRBV7-9A0A0J9YWB2 115 aa4.52□□□□□ -1.69
PTPRD-212ENST00000488774 LOC100131303A0A0U1RQF7 123 aa4.52□□□□□ -1.69
PTPRD-212ENST00000488774 RAB19A4D1S5 217 aa4.52□□□□□ -1.69
PTPRD-212ENST00000488774 TMEM189A5PLL7 270 aa4.52□□□□□ -1.69
PTPRD-212ENST00000488774 F5H768 121 aa4.52□□□□□ -1.69
PTPRD-212ENST00000488774 RGS13O14921 159 aa4.52□□□□□ -1.69
PTPRD-212ENST00000488774 SH2D1AO60880 128 aa4.52□□□□□ -1.69
PTPRD-212ENST00000488774 H2AFB1P0C5Y9 115 aa4.52□□□□□ -1.69
PTPRD-212ENST00000488774 CSN1S1P47710 185 aa4.52□□□□□ -1.69
PTPRD-212ENST00000488774 RPL19P84098 196 aaKnown RBP4.52□□□□□ -1.69
PTPRD-212ENST00000488774 TDRG1Q3Y452 100 aa4.52□□□□□ -1.69
PTPRD-212ENST00000488774 ZFP69Q49AA0 526 aa4.52□□□□□ -1.69
PTPRD-212ENST00000488774 CST9LP1Q5W188 147 aa4.52□□□□□ -1.69
PTPRD-212ENST00000488774 Q6ZSN1 163 aa4.52□□□□□ -1.69
PTPRD-212ENST00000488774 SLC51BQ86UW2 128 aa4.52□□□□□ -1.69
PTPRD-212ENST00000488774 ZNF680Q8NEM1 530 aa4.52□□□□□ -1.69
PTPRD-212ENST00000488774 CMTM2Q8TAZ6 248 aa4.52□□□□□ -1.69
PTPRD-212ENST00000488774 KRTAP1-5Q9BYS1 174 aa4.52□□□□□ -1.69
PTPRD-212ENST00000488774 LENEPQ9Y5L5 61 aa4.52□□□□□ -1.69
PTPRD-212ENST00000488774 BIRC6Q9NR09 4857 aa4.51□□□□□ -1.69
PTPRD-212ENST00000488774 TRAV26-1A0A087WT03 109 aa4.51□□□□□ -1.69
PTPRD-212ENST00000488774 TRGV1A0A0A0MS02 117 aa4.51□□□□□ -1.69
PTPRD-212ENST00000488774 TRAV1-1A0A0B4J248 108 aa4.51□□□□□ -1.69
PTPRD-212ENST00000488774 UMAD1C9J7I0 102 aa4.51□□□□□ -1.69
PTPRD-212ENST00000488774 C9JQL5 133 aa4.51□□□□□ -1.69
PTPRD-212ENST00000488774 C11orf94C9JXX5 98 aa4.51□□□□□ -1.69
PTPRD-212ENST00000488774 LTAP01374 205 aa4.51□□□□□ -1.69
PTPRD-212ENST00000488774 IFNA7P01567 189 aa4.51□□□□□ -1.69
PTPRD-212ENST00000488774 FHL2Q14192 279 aa4.51□□□□□ -1.69
PTPRD-212ENST00000488774 LGALS9CQ6DKI2 356 aa4.51□□□□□ -1.69
PTPRD-212ENST00000488774 ZNF493Q6ZR52 646 aa4.51□□□□□ -1.69
PTPRD-212ENST00000488774 COX8CQ7Z4L0 72 aa4.51□□□□□ -1.69
PTPRD-212ENST00000488774 ARL6IP6Q8N6S5 226 aa4.51□□□□□ -1.69
PTPRD-212ENST00000488774 C9orf85Q96MD7 179 aa4.51□□□□□ -1.69
PTPRD-212ENST00000488774 MLST8Q9BVC4 326 aa4.51□□□□□ -1.69
PTPRD-212ENST00000488774 GNG13Q9P2W3 67 aa4.51□□□□□ -1.69
PTPRD-212ENST00000488774 IGLV2-18A0A075B6J9 118 aa4.5□□□□□ -1.69
PTPRD-212ENST00000488774 TMSB15BA0A087X1C1 80 aa4.5□□□□□ -1.69
PTPRD-212ENST00000488774 A0A096LPF7 62 aa4.5□□□□□ -1.69
PTPRD-212ENST00000488774 GRIFINA4D1Z8 144 aa4.5□□□□□ -1.69
PTPRD-212ENST00000488774 SNURFLB1AK76 121 aa4.5□□□□□ -1.69
PTPRD-212ENST00000488774 KRBOX1C9JBD0 128 aa4.5□□□□□ -1.69
PTPRD-212ENST00000488774 M0R036 132 aa4.5□□□□□ -1.69
PTPRD-212ENST00000488774 M0R2N4 97 aa4.5□□□□□ -1.69
PTPRD-212ENST00000488774 SRSF3P84103 164 aaKnown RBP4.5□□□□□ -1.69
PTPRD-212ENST00000488774 OR5I1Q13606 314 aa4.5□□□□□ -1.69
PTPRD-212ENST00000488774 ZNF674Q2M3X9 581 aa4.5□□□□□ -1.69
PTPRD-212ENST00000488774 IBA57Q5T440 356 aaKnown RBP4.5□□□□□ -1.69
PTPRD-212ENST00000488774 LYPD6BQ8NI32 183 aa4.5□□□□□ -1.69
PTPRD-212ENST00000488774 SAMD10Q9BYL1 202 aa4.5□□□□□ -1.69
PTPRD-212ENST00000488774 LINC00588Q9Y4M8 146 aa4.5□□□□□ -1.69
PTPRD-212ENST00000488774 LRP1BQ9NZR2 4599 aa4.5□□□□□ -1.69
PTPRD-212ENST00000488774 IGHV3-73A0A0B4J1V6 119 aa4.49□□□□□ -1.69
PTPRD-212ENST00000488774 TRAV21A0A0B4J279 112 aa4.49□□□□□ -1.69
PTPRD-212ENST00000488774 MUC21A0A0G2JKD1 596 aa4.49□□□□□ -1.69
PTPRD-212ENST00000488774 TRBV6-1A0A0K0K1D8 114 aa4.49□□□□□ -1.69
PTPRD-212ENST00000488774 MUC21A0A140T8X8 626 aa4.49□□□□□ -1.69
PTPRD-212ENST00000488774 K7EN84 100 aa4.49□□□□□ -1.69
PTPRD-212ENST00000488774 NUDT3O95989 172 aa4.49□□□□□ -1.69
PTPRD-212ENST00000488774 ATP5G1P05496 136 aa4.49□□□□□ -1.69
PTPRD-212ENST00000488774 PFN1P07737 140 aaKnown RBP4.49□□□□□ -1.69
PTPRD-212ENST00000488774 GZMBP10144 247 aa4.49□□□□□ -1.69
PTPRD-212ENST00000488774 RPL35P42766 123 aaKnown RBP4.49□□□□□ -1.69
PTPRD-212ENST00000488774 ESRGQ1W209 222 aa4.49□□□□□ -1.69
PTPRD-212ENST00000488774 SMUG1Q53HV7 270 aa4.49□□□□□ -1.69
PTPRD-212ENST00000488774 ZNF506Q5JVG8 444 aa4.49□□□□□ -1.69
PTPRD-212ENST00000488774 UFSP1Q6NVU6 142 aa4.49□□□□□ -1.69
PTPRD-212ENST00000488774 RASL10AQ92737 203 aa4.49□□□□□ -1.69
PTPRD-212ENST00000488774 C11orf52Q96A22 123 aa4.49□□□□□ -1.69
PTPRD-212ENST00000488774 NDUFAF3Q9BU61 184 aa4.49□□□□□ -1.69
PTPRD-212ENST00000488774 C9JCJ5 164 aa4.48□□□□□ -1.69
PTPRD-212ENST00000488774 H3BVH4 76 aa4.48□□□□□ -1.69
PTPRD-212ENST00000488774 RTL8CO15255 209 aa4.48□□□□□ -1.69
PTPRD-212ENST00000488774 P0DMU3 169 aa4.48□□□□□ -1.69
PTPRD-212ENST00000488774 FAM231AP0DMU4 169 aa4.48□□□□□ -1.69
PTPRD-212ENST00000488774 FAM231CP0DMU5 169 aa4.48□□□□□ -1.69
PTPRD-212ENST00000488774 BCL2P10415 239 aa4.48□□□□□ -1.69
PTPRD-212ENST00000488774 AKR1C3P42330 323 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms