RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 PRNTQ86SH4 94 aa11.09□□□□□ -0.63
CTDSP1-209ENST00000488627 RASL10AQ92737 203 aa11.09□□□□□ -0.63
CTDSP1-209ENST00000488627 SPXQ9BT56 116 aa11.09□□□□□ -0.63
CTDSP1-209ENST00000488627 NDFIP1Q9BT67 221 aa11.09□□□□□ -0.63
CTDSP1-209ENST00000488627 M0R2N4 97 aa11.08□□□□□ -0.64
CTDSP1-209ENST00000488627 GCGP01275 180 aa11.08□□□□□ -0.64
CTDSP1-209ENST00000488627 IFNA7P01567 189 aa11.08□□□□□ -0.64
CTDSP1-209ENST00000488627 TYMSP04818 313 aa11.08□□□□□ -0.64
CTDSP1-209ENST00000488627 LINC00588Q9Y4M8 146 aa11.08□□□□□ -0.64
CTDSP1-209ENST00000488627 IGLV2-18A0A075B6J9 118 aa11.07□□□□□ -0.64
CTDSP1-209ENST00000488627 PEX7O00628 323 aa11.07□□□□□ -0.64
CTDSP1-209ENST00000488627 IGHV3-53P01767 116 aa11.07□□□□□ -0.64
CTDSP1-209ENST00000488627 PFN1P07737 140 aaKnown RBP11.07□□□□□ -0.64
CTDSP1-209ENST00000488627 FHL2Q14192 279 aa11.07□□□□□ -0.64
CTDSP1-209ENST00000488627 SAPCD1Q5SSQ6 148 aa11.07□□□□□ -0.64
CTDSP1-209ENST00000488627 STOML3Q8TAV4 291 aa11.07□□□□□ -0.64
CTDSP1-209ENST00000488627 FAM213BQ8TBF2 198 aa11.07□□□□□ -0.64
CTDSP1-209ENST00000488627 SFT2D1Q8WV19 159 aa11.07□□□□□ -0.64
CTDSP1-209ENST00000488627 HIST1H2BAQ96A08 127 aa11.07□□□□□ -0.64
CTDSP1-209ENST00000488627 TPT1P13693 172 aaKnown RBP11.06□□□□□ -0.64
CTDSP1-209ENST00000488627 EIF5AP63241 154 aaKnown RBP11.06□□□□□ -0.64
CTDSP1-209ENST00000488627 SMUG1Q53HV7 270 aa11.06□□□□□ -0.64
CTDSP1-209ENST00000488627 DPPA3Q6W0C5 159 aa11.06□□□□□ -0.64
CTDSP1-209ENST00000488627 ZNRF2Q8NHG8 242 aa11.06□□□□□ -0.64
CTDSP1-209ENST00000488627 KCNS1Q96KK3 526 aa11.06□□□□□ -0.64
CTDSP1-209ENST00000488627 SDF2L1Q9HCN8 221 aa11.06□□□□□ -0.64
CTDSP1-209ENST00000488627 ARL2-SNX15V9GYD0 113 aa11.06□□□□□ -0.64
CTDSP1-209ENST00000488627 MUC4Q99102 2169 aa11.06□□□□□ -0.64
CTDSP1-209ENST00000488627 A0A096LPF7 62 aa11.05□□□□□ -0.64
CTDSP1-209ENST00000488627 PFDN1O60925 122 aa11.05□□□□□ -0.64
CTDSP1-209ENST00000488627 CCL18P55774 89 aa11.05□□□□□ -0.64
CTDSP1-209ENST00000488627 COX8CQ7Z4L0 72 aa11.05□□□□□ -0.64
CTDSP1-209ENST00000488627 DNAH2Q9P225 4427 aa11.05□□□□□ -0.64
CTDSP1-209ENST00000488627 M0R2P5 195 aa11.04□□□□□ -0.64
CTDSP1-209ENST00000488627 RTL8CO15255 209 aa11.04□□□□□ -0.64
CTDSP1-209ENST00000488627 PAGE4O60829 102 aa11.04□□□□□ -0.64
CTDSP1-209ENST00000488627 C1QBP02746 253 aa11.04□□□□□ -0.64
CTDSP1-209ENST00000488627 SFTA3P0C7M3 94 aa11.04□□□□□ -0.64
CTDSP1-209ENST00000488627 CRIP1P50238 77 aa11.04□□□□□ -0.64
CTDSP1-209ENST00000488627 PPT1P50897 306 aa11.04□□□□□ -0.64
CTDSP1-209ENST00000488627 ESRGQ1W209 222 aa11.04□□□□□ -0.64
CTDSP1-209ENST00000488627 CST9LP1Q5W188 147 aa11.04□□□□□ -0.64
CTDSP1-209ENST00000488627 Q86TA4 180 aa11.04□□□□□ -0.64
CTDSP1-209ENST00000488627 ZNF479Q96JC4 524 aa11.04□□□□□ -0.64
CTDSP1-209ENST00000488627 IGKV3D-20A0A0C4DH25 116 aa11.03□□□□□ -0.64
CTDSP1-209ENST00000488627 H2AFB1P0C5Y9 115 aa11.03□□□□□ -0.64
CTDSP1-209ENST00000488627 CRYBA4P53673 196 aa11.03□□□□□ -0.64
CTDSP1-209ENST00000488627 TCEAL7Q9BRU2 100 aa11.03□□□□□ -0.64
CTDSP1-209ENST00000488627 PRO0255Q9UI72 69 aa11.03□□□□□ -0.64
CTDSP1-209ENST00000488627 HHLA3Q9XRX5 114 aa11.03□□□□□ -0.64
CTDSP1-209ENST00000488627 NACAE9PAV3 2078 aa11.02□□□□□ -0.64
CTDSP1-209ENST00000488627 FAT2Q9NYQ8 4349 aa11.02□□□□□ -0.64
CTDSP1-209ENST00000488627 TRBV6-1A0A0K0K1D8 114 aa11.02□□□□□ -0.65
CTDSP1-209ENST00000488627 A0A1B0GV50 99 aa11.02□□□□□ -0.65
CTDSP1-209ENST00000488627 PAX4O43316 350 aa11.02□□□□□ -0.65
CTDSP1-209ENST00000488627 SLAQ13239 276 aa11.02□□□□□ -0.65
CTDSP1-209ENST00000488627 ZFP69Q49AA0 526 aa11.02□□□□□ -0.65
CTDSP1-209ENST00000488627 C9orf85Q96MD7 179 aa11.02□□□□□ -0.65
CTDSP1-209ENST00000488627 ZFP30Q9Y2G7 519 aa11.02□□□□□ -0.65
CTDSP1-209ENST00000488627 TRAV1-1A0A0B4J248 108 aa11.01□□□□□ -0.65
CTDSP1-209ENST00000488627 TRAV4A0A0B4J268 109 aa11.01□□□□□ -0.65
CTDSP1-209ENST00000488627 FABP5P3A8MUU1 101 aa11.01□□□□□ -0.65
CTDSP1-209ENST00000488627 RNASE3P12724 160 aaKnown RBP11.01□□□□□ -0.65
CTDSP1-209ENST00000488627 CCL20P78556 96 aa11.01□□□□□ -0.65
CTDSP1-209ENST00000488627 ZNF575Q86XF7 245 aa11.01□□□□□ -0.65
CTDSP1-209ENST00000488627 ZC2HC1AQ96GY0 325 aa11.01□□□□□ -0.65
CTDSP1-209ENST00000488627 FMC1Q96HJ9 113 aa11.01□□□□□ -0.65
CTDSP1-209ENST00000488627 UPK3BQ9BT76 320 aa11.01□□□□□ -0.65
CTDSP1-209ENST00000488627 DNAH17Q9UFH2 4485 aa11.01□□□□□ -0.65
CTDSP1-209ENST00000488627 hCG_2014768A0A024R1R8 64 aa11□□□□□ -0.65
CTDSP1-209ENST00000488627 LTAP01374 205 aa11□□□□□ -0.65
CTDSP1-209ENST00000488627 LINC00336Q6ZUF6 198 aa11□□□□□ -0.65
CTDSP1-209ENST00000488627 PTH2Q96A98 100 aa11□□□□□ -0.65
CTDSP1-209ENST00000488627 Q9H8V8 135 aa11□□□□□ -0.65
CTDSP1-209ENST00000488627 TRGV4A0A0C4DH28 118 aa10.99□□□□□ -0.65
CTDSP1-209ENST00000488627 NBDYA0A0U1RRE5 68 aa10.99□□□□□ -0.65
CTDSP1-209ENST00000488627 SULT1A2P50226 295 aa10.99□□□□□ -0.65
CTDSP1-209ENST00000488627 RAB5CP51148 216 aa10.99□□□□□ -0.65
CTDSP1-209ENST00000488627 AKAP14Q86UN6 197 aa10.99□□□□□ -0.65
CTDSP1-209ENST00000488627 OR4C5Q8NGB2 326 aa10.99□□□□□ -0.65
CTDSP1-209ENST00000488627 MRPS16Q9Y3D3 137 aaKnown RBP10.99□□□□□ -0.65
CTDSP1-209ENST00000488627 SCO2A0A1W2PP80 73 aa10.98□□□□□ -0.65
CTDSP1-209ENST00000488627 PGPEP1LA6NFU8 196 aa10.98□□□□□ -0.65
CTDSP1-209ENST00000488627 C9JCJ5 164 aa10.98□□□□□ -0.65
CTDSP1-209ENST00000488627 UBE2G1P62253 170 aa10.98□□□□□ -0.65
CTDSP1-209ENST00000488627 ZNF674Q2M3X9 581 aa10.98□□□□□ -0.65
CTDSP1-209ENST00000488627 ZNF876PQ49A33 203 aa10.98□□□□□ -0.65
CTDSP1-209ENST00000488627 EIF5AL1Q6IS14 154 aaKnown RBP10.98□□□□□ -0.65
CTDSP1-209ENST00000488627 SLC51BQ86UW2 128 aa10.98□□□□□ -0.65
CTDSP1-209ENST00000488627 C9orf62Q8N4C0 152 aa10.98□□□□□ -0.65
CTDSP1-209ENST00000488627 ICOSQ9Y6W8 199 aa10.98□□□□□ -0.65
CTDSP1-209ENST00000488627 A0A1B0GVY2 172 aa10.97□□□□□ -0.65
CTDSP1-209ENST00000488627 KRBOX1C9JBD0 128 aa10.97□□□□□ -0.65
CTDSP1-209ENST00000488627 RS1O15537 224 aa10.97□□□□□ -0.65
CTDSP1-209ENST00000488627 SH2D1AO60880 128 aa10.97□□□□□ -0.65
CTDSP1-209ENST00000488627 AKR1C3P42330 323 aa10.97□□□□□ -0.65
CTDSP1-209ENST00000488627 MRPL23Q16540 153 aaKnown RBP10.97□□□□□ -0.65
CTDSP1-209ENST00000488627 HECTD4Q9Y4D8 3996 aa10.96□□□□□ -0.65
CTDSP1-209ENST00000488627 K7EQD1 137 aa10.96□□□□□ -0.65
CTDSP1-209ENST00000488627 GATA1P15976 413 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms