RNA–Protein interactions for RNA: ENST00000488175.5

GCOM1-210, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,601 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-210ENST00000488175 MUC6Q6W4X9 2439 aa12.49□□□□□ -0.41
GCOM1-210ENST00000488175 PRSS47A8MTI9 375 aa12.49□□□□□ -0.41
GCOM1-210ENST00000488175 K7ENP7 123 aa12.49□□□□□ -0.41
GCOM1-210ENST00000488175 FOXI2Q6ZQN5 318 aa12.49□□□□□ -0.41
GCOM1-210ENST00000488175 C9orf47Q6ZRZ4 202 aa12.49□□□□□ -0.41
GCOM1-210ENST00000488175 LCNL1Q6ZST4 164 aa12.49□□□□□ -0.41
GCOM1-210ENST00000488175 EEF1AKMT3Q96AZ1 226 aa12.49□□□□□ -0.41
GCOM1-210ENST00000488175 C20orf173Q96LM9 149 aa12.49□□□□□ -0.41
GCOM1-210ENST00000488175 SMIM2Q9BVW6 85 aa12.48□□□□□ -0.41
GCOM1-210ENST00000488175 PLNP26678 52 aa12.48□□□□□ -0.41
GCOM1-210ENST00000488175 ADORA2A-AS1P86434 159 aa12.48□□□□□ -0.41
GCOM1-210ENST00000488175 RPL39LQ96EH5 51 aaKnown RBP12.48□□□□□ -0.41
GCOM1-210ENST00000488175 SH2D6Q7Z4S9 175 aa12.47□□□□□ -0.41
GCOM1-210ENST00000488175 TMEM219Q86XT9 240 aa12.47□□□□□ -0.41
GCOM1-210ENST00000488175 SCGB3A1Q96QR1 104 aa12.47□□□□□ -0.41
GCOM1-210ENST00000488175 AGRNO00468 2067 aa12.47□□□□□ -0.41
GCOM1-210ENST00000488175 IGHV4-4A0A075B6R2 117 aa12.47□□□□□ -0.41
GCOM1-210ENST00000488175 F8VRH5 84 aa12.47□□□□□ -0.41
GCOM1-210ENST00000488175 H7C1H1 209 aa12.47□□□□□ -0.41
GCOM1-210ENST00000488175 HLA-DRB4P13762 266 aa12.47□□□□□ -0.41
GCOM1-210ENST00000488175 C14orf178Q8N769 122 aaPredicted RBP12.47□□□□□ -0.41
GCOM1-210ENST00000488175 GTSF1LQ9H1H1 148 aa12.47□□□□□ -0.41
GCOM1-210ENST00000488175 HLA-DRB4X5D2U9 266 aa12.47□□□□□ -0.41
GCOM1-210ENST00000488175 A0A1W2PPR1 153 aa12.46□□□□□ -0.41
GCOM1-210ENST00000488175 HIF1ANQ9NWT6 349 aa12.46□□□□□ -0.41
GCOM1-210ENST00000488175 CHTOPQ9Y3Y2 248 aaKnown RBP12.46□□□□□ -0.41
GCOM1-210ENST00000488175 CELSR1Q9NYQ6 3014 aa12.46□□□□□ -0.41
GCOM1-210ENST00000488175 DEFB104AQ8WTQ1 72 aa12.46□□□□□ -0.42
GCOM1-210ENST00000488175 RASL10AQ92737 203 aa12.46□□□□□ -0.42
GCOM1-210ENST00000488175 CYSLTR1Q9Y271 337 aa12.46□□□□□ -0.42
GCOM1-210ENST00000488175 UBE2E1P51965 193 aa12.45□□□□□ -0.42
GCOM1-210ENST00000488175 ETDBQ3ZM63 59 aa12.45□□□□□ -0.42
GCOM1-210ENST00000488175 OR11H12B2RN74 326 aa12.45□□□□□ -0.42
GCOM1-210ENST00000488175 S100A4P26447 101 aaKnown RBP12.45□□□□□ -0.42
GCOM1-210ENST00000488175 SUMO2P61956 95 aaKnown RBP12.45□□□□□ -0.42
GCOM1-210ENST00000488175 ATP5G2Q06055 141 aa12.45□□□□□ -0.42
GCOM1-210ENST00000488175 OR11H1Q8NG94 326 aa12.45□□□□□ -0.42
GCOM1-210ENST00000488175 OR11H2Q8NH07 326 aa12.45□□□□□ -0.42
GCOM1-210ENST00000488175 SPANXB1Q9NS25 103 aaPredicted RBP12.45□□□□□ -0.42
GCOM1-210ENST00000488175 TRBV7-3A0A075B6L6 115 aa12.44□□□□□ -0.42
GCOM1-210ENST00000488175 TRBV7-1A0A0A6YYK4 115 aa12.44□□□□□ -0.42
GCOM1-210ENST00000488175 CENPVL3A0A0U1RRI6 287 aa12.44□□□□□ -0.42
GCOM1-210ENST00000488175 MRPL53Q96EL3 112 aaKnown RBP12.44□□□□□ -0.42
GCOM1-210ENST00000488175 MRAP2Q96G30 205 aa12.44□□□□□ -0.42
GCOM1-210ENST00000488175 U3KQE9 123 aa12.44□□□□□ -0.42
GCOM1-210ENST00000488175 IGF2RP11717 2491 aa12.44□□□□□ -0.42
GCOM1-210ENST00000488175 IGHV3OR16-10A0A075B7F0 116 aa12.44□□□□□ -0.42
GCOM1-210ENST00000488175 MYMXA0A1B0GTQ4 84 aa12.44□□□□□ -0.42
GCOM1-210ENST00000488175 F8W1H4 67 aa12.44□□□□□ -0.42
GCOM1-210ENST00000488175 MGPP08493 103 aa12.44□□□□□ -0.42
GCOM1-210ENST00000488175 TAL2Q16559 108 aa12.44□□□□□ -0.42
GCOM1-210ENST00000488175 TSSC4Q9Y5U2 329 aaPredicted RBP12.44□□□□□ -0.42
GCOM1-210ENST00000488175 IGKV3-7A0A075B6H7 116 aa12.43□□□□□ -0.42
GCOM1-210ENST00000488175 SAMD13Q5VXD3 122 aa12.43□□□□□ -0.42
GCOM1-210ENST00000488175 UNQ9165/PRO28630Q6UXU0 137 aa12.43□□□□□ -0.42
GCOM1-210ENST00000488175 GLMPQ8WWB7 406 aa12.43□□□□□ -0.42
GCOM1-210ENST00000488175 TRBV12-3P01733 135 aa12.43□□□□□ -0.42
GCOM1-210ENST00000488175 AZU1P20160 251 aa12.43□□□□□ -0.42
GCOM1-210ENST00000488175 NEXN-AS1Q8NBZ9 246 aa12.43□□□□□ -0.42
GCOM1-210ENST00000488175 TOMM6Q96B49 74 aa12.43□□□□□ -0.42
GCOM1-210ENST00000488175 COL6A6A6NMZ7 2263 aa12.43□□□□□ -0.42
GCOM1-210ENST00000488175 TRAV12-1A0A0B4J245 112 aa12.42□□□□□ -0.42
GCOM1-210ENST00000488175 SMAGPQ0VAQ4 97 aa12.42□□□□□ -0.42
GCOM1-210ENST00000488175 KLK9Q2XQG4 91 aa12.42□□□□□ -0.42
GCOM1-210ENST00000488175 ORMDL2Q53FV1 153 aa12.42□□□□□ -0.42
GCOM1-210ENST00000488175 ZFAND2AQ8N6M9 145 aa12.42□□□□□ -0.42
GCOM1-210ENST00000488175 KLK9Q9UKQ9 250 aa12.42□□□□□ -0.42
GCOM1-210ENST00000488175 PHLDA3Q9Y5J5 127 aa12.42□□□□□ -0.42
GCOM1-210ENST00000488175 F6UB75 175 aa12.42□□□□□ -0.42
GCOM1-210ENST00000488175 RRN3P1Q2M238 152 aa12.42□□□□□ -0.42
GCOM1-210ENST00000488175 GNRH2O43555 120 aa12.41□□□□□ -0.42
GCOM1-210ENST00000488175 ANXA2RQ3ZCQ2 193 aa12.41□□□□□ -0.42
GCOM1-210ENST00000488175 C2orf66Q6UXQ4 117 aa12.41□□□□□ -0.42
GCOM1-210ENST00000488175 GPHB5Q86YW7 130 aa12.41□□□□□ -0.42
GCOM1-210ENST00000488175 C5orf56Q8N8D9 126 aa12.41□□□□□ -0.42
GCOM1-210ENST00000488175 ITLN2Q8WWU7 325 aaPredicted RBP12.41□□□□□ -0.42
GCOM1-210ENST00000488175 RAXQ9Y2V3 346 aa12.41□□□□□ -0.42
GCOM1-210ENST00000488175 VPS13CQ709C8 3753 aa12.41□□□□□ -0.42
GCOM1-210ENST00000488175 LGALS1P09382 135 aaKnown RBP12.41□□□□□ -0.42
GCOM1-210ENST00000488175 RNASE4P34096 147 aaKnown RBP12.41□□□□□ -0.42
GCOM1-210ENST00000488175 RPL11P62913 178 aaKnown RBP12.41□□□□□ -0.42
GCOM1-210ENST00000488175 BAALCQ8WXS3 180 aa12.41□□□□□ -0.42
GCOM1-210ENST00000488175 PRSS29PA6NIE9 313 aa12.41□□□□□ -0.42
GCOM1-210ENST00000488175 INSL3P51460 131 aa12.41□□□□□ -0.42
GCOM1-210ENST00000488175 GAGE13Q4V321 117 aa12.41□□□□□ -0.42
GCOM1-210ENST00000488175 SFTA2Q6UW10 78 aa12.41□□□□□ -0.42
GCOM1-210ENST00000488175 SPAG8Q99932 426 aaPredicted RBP12.41□□□□□ -0.42
GCOM1-210ENST00000488175 PRADC1Q9BSG0 188 aa12.41□□□□□ -0.42
GCOM1-210ENST00000488175 GAGE12HA6NDE8 117 aa12.4□□□□□ -0.42
GCOM1-210ENST00000488175 ARL3P36405 182 aa12.4□□□□□ -0.42
GCOM1-210ENST00000488175 SCGB2A2Q13296 93 aa12.4□□□□□ -0.42
GCOM1-210ENST00000488175 C9orf139Q6ZV77 190 aa12.4□□□□□ -0.42
GCOM1-210ENST00000488175 DPH3P1Q9H4G8 78 aa12.4□□□□□ -0.42
GCOM1-210ENST00000488175 TRAV41A0A0B4J266 112 aa12.4□□□□□ -0.43
GCOM1-210ENST00000488175 RNF223E7ERA6 249 aa12.4□□□□□ -0.43
GCOM1-210ENST00000488175 ASIPP42127 132 aa12.4□□□□□ -0.43
GCOM1-210ENST00000488175 OR10J6PQ8NGY7 276 aa12.4□□□□□ -0.43
GCOM1-210ENST00000488175 SIGMAR1Q99720 223 aa12.4□□□□□ -0.43
GCOM1-210ENST00000488175 TRAV21A0A0B4J279 112 aa12.39□□□□□ -0.43
GCOM1-210ENST00000488175 NPFFO15130 113 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms