RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 NRACQ8N912 160 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 KLF14Q8TD94 323 aaPredicted RBP3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 UBE2WQ96B02 151 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 PLEKHB2Q96CS7 222 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 SHANK2-AS3Q9BTD1 123 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 NGBQ9NPG2 151 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 ONECUT1Q9UBC0 465 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 IGHV3-64DA0A0J9YX35 117 aa3.63□□□□□ -1.83
CDC42BPA-213ENST00000488131 C17orf100A8MU93 164 aa3.63□□□□□ -1.83
CDC42BPA-213ENST00000488131 H3BT86 120 aa3.63□□□□□ -1.83
CDC42BPA-213ENST00000488131 GAS8-AS1O95177 125 aa3.63□□□□□ -1.83
CDC42BPA-213ENST00000488131 IGHV3-33P01772 117 aa3.63□□□□□ -1.83
CDC42BPA-213ENST00000488131 GLRXP35754 106 aa3.63□□□□□ -1.83
CDC42BPA-213ENST00000488131 EFNA4P52798 201 aa3.63□□□□□ -1.83
CDC42BPA-213ENST00000488131 CRIP2P52943 208 aaPredicted RBP3.63□□□□□ -1.83
CDC42BPA-213ENST00000488131 HERVK_113P63121 156 aa3.63□□□□□ -1.83
CDC42BPA-213ENST00000488131 SRSF9Q13242 221 aaKnown RBP eCLIP3.63□□□□□ -1.83
CDC42BPA-213ENST00000488131 ZNF672Q499Z4 452 aaPredicted RBP3.63□□□□□ -1.83
CDC42BPA-213ENST00000488131 TMEM170BQ5T4T1 132 aa3.63□□□□□ -1.83
CDC42BPA-213ENST00000488131 C9orf153Q5TBE3 101 aa3.63□□□□□ -1.83
CDC42BPA-213ENST00000488131 RUSC1-AS1Q66K80 236 aa3.63□□□□□ -1.83
CDC42BPA-213ENST00000488131 SCGB1D4Q6XE38 83 aa3.63□□□□□ -1.83
CDC42BPA-213ENST00000488131 SLC25A29Q8N8R3 303 aa3.63□□□□□ -1.83
CDC42BPA-213ENST00000488131 MRAPQ8TCY5 172 aa3.63□□□□□ -1.83
CDC42BPA-213ENST00000488131 RNF125Q96EQ8 232 aa3.63□□□□□ -1.83
CDC42BPA-213ENST00000488131 DEFB118Q96PH6 123 aa3.63□□□□□ -1.83
CDC42BPA-213ENST00000488131 CHCHD5Q9BSY4 110 aa3.63□□□□□ -1.83
CDC42BPA-213ENST00000488131 AKIRIN1Q9H9L7 192 aaPredicted RBP3.63□□□□□ -1.83
CDC42BPA-213ENST00000488131 RPUSD1Q9UJJ7 312 aaKnown RBP3.63□□□□□ -1.83
CDC42BPA-213ENST00000488131 TEX49A0A1B0GTD5 131 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 IGLV2-23P01705 113 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 CRYGBP07316 175 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 CRYGAP11844 174 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 WT1P19544 449 aaPredicted RBP3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 C10orf55Q5SWW7 151 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 SFTA2Q6UW10 78 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 TMEM263Q8WUH6 116 aaKnown RBP3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 LEAP2Q969E1 77 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 TOMM6Q96B49 74 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 RANBP2P49792 3224 aaKnown RBP3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 ASCC3Q8N3C0 2202 aaKnown RBP3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 C5orf42Q9H799 3197 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 IGHV1OR15-9A0A0B4J2B8 117 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 TRBV30A0A0K0K1B3 111 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 LOC107984640A0A0U1RRK4 108 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 FAM236AA0A1B0GUQ0 79 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 FAM236BA0A1B0GV22 79 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 PINLYPA6NC86 204 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 IGHV3-48P01763 117 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 ACYP1P07311 99 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 ERCC8Q13216 396 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 MRGPRG-AS1Q2M3A8 158 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 TMEM155Q4W5P6 130 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 ORMDL2Q53FV1 153 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 PAPPA-AS1Q5QFB9 102 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 SDIM1Q6ZPB5 146 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 KIR2DL5BQ8NHK3 375 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 IGFBPL1Q8WX77 278 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 AMELXQ99217 191 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 ASCL2Q99929 193 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 SMIM2Q9BVW6 85 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 UBTD1Q9HAC8 227 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 SDK2Q58EX2 2172 aa3.62□□□□□ -1.83
CDC42BPA-213ENST00000488131 MKI67P46013 3256 aaKnown RBP3.61□□□□□ -1.83
CDC42BPA-213ENST00000488131 LAMA2P24043 3122 aaKnown RBP3.61□□□□□ -1.83
CDC42BPA-213ENST00000488131 IGHV4-4A0A075B6R2 117 aa3.61□□□□□ -1.83
CDC42BPA-213ENST00000488131 OOSP1A8MZH6 123 aa3.61□□□□□ -1.83
CDC42BPA-213ENST00000488131 TGFAP01135 160 aa3.61□□□□□ -1.83
CDC42BPA-213ENST00000488131 LHBP01229 141 aa3.61□□□□□ -1.83
CDC42BPA-213ENST00000488131 GATA1P15976 413 aaPredicted RBP3.61□□□□□ -1.83
CDC42BPA-213ENST00000488131 HERVK_113P61574 105 aa3.61□□□□□ -1.83
CDC42BPA-213ENST00000488131 LYZP61626 148 aa3.61□□□□□ -1.83
CDC42BPA-213ENST00000488131 HIST1H4AP62805 103 aaKnown RBP3.61□□□□□ -1.83
CDC42BPA-213ENST00000488131 FAM201AQ5SY85 155 aa3.61□□□□□ -1.83
CDC42BPA-213ENST00000488131 TRPT1Q86TN4 253 aaKnown RBP3.61□□□□□ -1.83
CDC42BPA-213ENST00000488131 C8orf31Q8N9H6 132 aa3.61□□□□□ -1.83
CDC42BPA-213ENST00000488131 MSRB1Q9NZV6 116 aa3.61□□□□□ -1.83
CDC42BPA-213ENST00000488131 CHD9Q3L8U1 2897 aa3.61□□□□□ -1.83
CDC42BPA-213ENST00000488131 IGHV5-10-1A0A0J9YXX1 117 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 RBAKDNA6NC62 111 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 F5H768 121 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 M0R3E3 92 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 TIMM8AO60220 97 aaPredicted RBP3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 IGKV1-17P01599 117 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 IGKV3-15P01624 115 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 CRYGDP07320 174 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 CD59P13987 128 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 COX7CP15954 63 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 CXCL5P42830 114 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 ZNF80P51504 273 aaPredicted RBP3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 TMEM258P61165 79 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 PMVKQ15126 192 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 VMA21Q3ZAQ7 101 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 SLC25A45Q8N413 288 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 C3orf56Q8N813 242 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 ZNRF1Q8ND25 227 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 FAM110DQ8TAY7 271 aaPredicted RBP3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 C17orf77Q96MU5 243 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 SCGB3A1Q96QR1 104 aa3.6□□□□□ -1.83
CDC42BPA-213ENST00000488131 PI4KAP42356 2102 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms