RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 LINC00587B1AMM8 73 aa5.71□□□□□ -1.5
NECTIN3-209ENST00000488016 H3BRN7 92 aa5.71□□□□□ -1.5
NECTIN3-209ENST00000488016 ESDP10768 282 aa5.71□□□□□ -1.5
NECTIN3-209ENST00000488016 HLA-DMBP28068 263 aa5.71□□□□□ -1.5
NECTIN3-209ENST00000488016 S100A7P31151 101 aa5.71□□□□□ -1.5
NECTIN3-209ENST00000488016 BMI1P35226 326 aa5.71□□□□□ -1.5
NECTIN3-209ENST00000488016 GNG4P50150 75 aa5.71□□□□□ -1.5
NECTIN3-209ENST00000488016 UBE2G2P60604 165 aa5.71□□□□□ -1.5
NECTIN3-209ENST00000488016 ERVFC1-1P60608 527 aa5.71□□□□□ -1.5
NECTIN3-209ENST00000488016 GCSAMLQ5JQS6 135 aa5.71□□□□□ -1.5
NECTIN3-209ENST00000488016 GDF5OSQ5U4N7 250 aa5.71□□□□□ -1.5
NECTIN3-209ENST00000488016 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.71□□□□□ -1.5
NECTIN3-209ENST00000488016 MRPL52Q86TS9 123 aaKnown RBP5.71□□□□□ -1.5
NECTIN3-209ENST00000488016 SLC25A39Q9BZJ4 359 aaPredicted RBP5.71□□□□□ -1.5
NECTIN3-209ENST00000488016 TRAV5A0A0B4J249 113 aa5.7□□□□□ -1.5
NECTIN3-209ENST00000488016 F6UB75 175 aa5.7□□□□□ -1.5
NECTIN3-209ENST00000488016 SOCS3O14543 225 aa5.7□□□□□ -1.5
NECTIN3-209ENST00000488016 AMBPP02760 352 aa5.7□□□□□ -1.5
NECTIN3-209ENST00000488016 NHLRC4P0CG21 123 aaPredicted RBP5.7□□□□□ -1.5
NECTIN3-209ENST00000488016 ATP5G3P48201 142 aa5.7□□□□□ -1.5
NECTIN3-209ENST00000488016 FOXI1Q12951 378 aa5.7□□□□□ -1.5
NECTIN3-209ENST00000488016 OR10J3Q5JRS4 329 aa5.7□□□□□ -1.5
NECTIN3-209ENST00000488016 SPATA31B1PQ5VZV4 182 aa5.7□□□□□ -1.5
NECTIN3-209ENST00000488016 FAM231DQ6ZW35 169 aa5.7□□□□□ -1.5
NECTIN3-209ENST00000488016 OR8I2Q8N0Y5 310 aa5.7□□□□□ -1.5
NECTIN3-209ENST00000488016 RNF182Q8N6D2 247 aa5.7□□□□□ -1.5
NECTIN3-209ENST00000488016 OVOL2Q9BRP0 275 aa5.7□□□□□ -1.5
NECTIN3-209ENST00000488016 SEPSECSQ9HD40 501 aaKnown RBP5.7□□□□□ -1.5
NECTIN3-209ENST00000488016 NRN1Q9NPD7 142 aa5.7□□□□□ -1.5
NECTIN3-209ENST00000488016 HIGD1AQ9Y241 93 aa5.7□□□□□ -1.5
NECTIN3-209ENST00000488016 TRAV8-2A0A0B4J237 113 aa5.69□□□□□ -1.5
NECTIN3-209ENST00000488016 COX7A2P2O60397 106 aa5.69□□□□□ -1.5
NECTIN3-209ENST00000488016 OR7C2O60412 319 aa5.69□□□□□ -1.5
NECTIN3-209ENST00000488016 HYPMO75409 117 aa5.69□□□□□ -1.5
NECTIN3-209ENST00000488016 IGKV3-20P01619 116 aa5.69□□□□□ -1.5
NECTIN3-209ENST00000488016 HLA-DQA1P01909 254 aa5.69□□□□□ -1.5
NECTIN3-209ENST00000488016 GIG44P09565 113 aaPredicted RBP5.69□□□□□ -1.5
NECTIN3-209ENST00000488016 GZMBP10144 247 aa5.69□□□□□ -1.5
NECTIN3-209ENST00000488016 CRISP2P16562 243 aa5.69□□□□□ -1.5
NECTIN3-209ENST00000488016 RAB4AP20338 218 aa5.69□□□□□ -1.5
NECTIN3-209ENST00000488016 GCSHP23434 173 aa5.69□□□□□ -1.5
NECTIN3-209ENST00000488016 DDTP30046 118 aa5.69□□□□□ -1.5
NECTIN3-209ENST00000488016 FXYD7P58549 80 aa5.69□□□□□ -1.5
NECTIN3-209ENST00000488016 PLP1P60201 277 aa5.69□□□□□ -1.5
NECTIN3-209ENST00000488016 RAB4BP61018 213 aa5.69□□□□□ -1.5
NECTIN3-209ENST00000488016 SSTP61278 116 aa5.69□□□□□ -1.5
NECTIN3-209ENST00000488016 C10orf113Q5VZT2 155 aa5.69□□□□□ -1.5
NECTIN3-209ENST00000488016 LINC00305Q7Z4B0 112 aa5.69□□□□□ -1.5
NECTIN3-209ENST00000488016 SHANK2-AS3Q9BTD1 123 aa5.69□□□□□ -1.5
NECTIN3-209ENST00000488016 EDA2RQ9HAV5 297 aa5.69□□□□□ -1.5
NECTIN3-209ENST00000488016 ZNF331Q9NQX6 463 aaPredicted RBP5.69□□□□□ -1.5
NECTIN3-209ENST00000488016 CLEC5AQ9NY25 188 aa5.69□□□□□ -1.5
NECTIN3-209ENST00000488016 DNAH10Q8IVF4 4471 aa5.68□□□□□ -1.5
NECTIN3-209ENST00000488016 TRAV2A0A0B4J234 112 aa5.68□□□□□ -1.5
NECTIN3-209ENST00000488016 FAM231BA6NCW3 169 aa5.68□□□□□ -1.5
NECTIN3-209ENST00000488016 SLC17A3O00476 420 aa5.68□□□□□ -1.5
NECTIN3-209ENST00000488016 MRPS12O15235 138 aaKnown RBP5.68□□□□□ -1.5
NECTIN3-209ENST00000488016 CA1P00915 261 aaPredicted RBP5.68□□□□□ -1.5
NECTIN3-209ENST00000488016 ZNF705DP0CH99 300 aaPredicted RBP5.68□□□□□ -1.5
NECTIN3-209ENST00000488016 ZNF705BP0CI00 300 aaPredicted RBP5.68□□□□□ -1.5
NECTIN3-209ENST00000488016 HIST1H1EP10412 219 aaKnown RBP5.68□□□□□ -1.5
NECTIN3-209ENST00000488016 GFI1BQ5VTD9 330 aa5.68□□□□□ -1.5
NECTIN3-209ENST00000488016 ZFAND6Q6FIF0 208 aa5.68□□□□□ -1.5
NECTIN3-209ENST00000488016 MIR17HGQ75NE6 70 aa5.68□□□□□ -1.5
NECTIN3-209ENST00000488016 TRPT1Q86TN4 253 aaKnown RBP5.68□□□□□ -1.5
NECTIN3-209ENST00000488016 ARL6IP6Q8N6S5 226 aa5.68□□□□□ -1.5
NECTIN3-209ENST00000488016 PAXXQ9BUH6 204 aa5.68□□□□□ -1.5
NECTIN3-209ENST00000488016 YTHDF2Q9Y5A9 579 aaKnown RBP5.68□□□□□ -1.5
NECTIN3-209ENST00000488016 COX11Q9Y6N1 276 aa5.68□□□□□ -1.5
NECTIN3-209ENST00000488016 DNAH2Q9P225 4427 aa5.67□□□□□ -1.5
NECTIN3-209ENST00000488016 SMIM27A0A1W2PRY6 76 aa5.67□□□□□ -1.5
NECTIN3-209ENST00000488016 ZNF705GA8MUZ8 300 aaPredicted RBP5.67□□□□□ -1.5
NECTIN3-209ENST00000488016 DEFB4AO15263 64 aa5.67□□□□□ -1.5
NECTIN3-209ENST00000488016 SCGB1D1O95968 90 aa5.67□□□□□ -1.5
NECTIN3-209ENST00000488016 APOC4P55056 127 aa5.67□□□□□ -1.5
NECTIN3-209ENST00000488016 IBA57Q5T440 356 aaKnown RBP5.67□□□□□ -1.5
NECTIN3-209ENST00000488016 C1orf194Q5T5A4 169 aa5.67□□□□□ -1.5
NECTIN3-209ENST00000488016 ATP5L2Q7Z4Y8 100 aa5.67□□□□□ -1.5
NECTIN3-209ENST00000488016 BAGE3Q86Y29 109 aa5.67□□□□□ -1.5
NECTIN3-209ENST00000488016 BAGE2Q86Y30 109 aa5.67□□□□□ -1.5
NECTIN3-209ENST00000488016 STHQ8IWL8 128 aa5.67□□□□□ -1.5
NECTIN3-209ENST00000488016 LYPD1Q8N2G4 141 aa5.67□□□□□ -1.5
NECTIN3-209ENST00000488016 CSTL1Q9H114 145 aa5.67□□□□□ -1.5
NECTIN3-209ENST00000488016 FAM30AQ9NZY2 134 aa5.67□□□□□ -1.5
NECTIN3-209ENST00000488016 KLF12Q9Y4X4 402 aa5.67□□□□□ -1.5
NECTIN3-209ENST00000488016 V9GYV3 84 aa5.67□□□□□ -1.5
NECTIN3-209ENST00000488016 A0A0J9YWU9 116 aa5.66□□□□□ -1.5
NECTIN3-209ENST00000488016 FBLL1A6NHQ2 334 aaKnown RBP5.66□□□□□ -1.5
NECTIN3-209ENST00000488016 ZNF705FA8MVS1 300 aaPredicted RBP5.66□□□□□ -1.5
NECTIN3-209ENST00000488016 A8MWL6 223 aa5.66□□□□□ -1.5
NECTIN3-209ENST00000488016 PRAC2D3DTV9 90 aa5.66□□□□□ -1.5
NECTIN3-209ENST00000488016 SPRY2O43597 315 aa5.66□□□□□ -1.5
NECTIN3-209ENST00000488016 NBEAP1P0C6P0 100 aa5.66□□□□□ -1.5
NECTIN3-209ENST00000488016 PYYP10082 97 aa5.66□□□□□ -1.5
NECTIN3-209ENST00000488016 SNRPD3P62318 126 aaKnown RBP5.66□□□□□ -1.5
NECTIN3-209ENST00000488016 TMEM183BQ1AE95 376 aa5.66□□□□□ -1.5
NECTIN3-209ENST00000488016 PDZD11Q5EBL8 140 aa5.66□□□□□ -1.5
NECTIN3-209ENST00000488016 CENPWQ5EE01 88 aa5.66□□□□□ -1.5
NECTIN3-209ENST00000488016 CMTM2Q8TAZ6 248 aa5.66□□□□□ -1.5
NECTIN3-209ENST00000488016 RNF183Q96D59 192 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms