RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 UFD1Q92890 307 aa2.75□□□□□ -1.97
BRCA1-217ENST00000487825 DERL3Q96Q80 235 aa2.75□□□□□ -1.97
BRCA1-217ENST00000487825 PRO0255Q9UI72 69 aa2.75□□□□□ -1.97
BRCA1-217ENST00000487825 KCNIP3Q9Y2W7 256 aa2.75□□□□□ -1.97
BRCA1-217ENST00000487825 TRGV2A0A075B6R0 118 aa2.74□□□□□ -1.97
BRCA1-217ENST00000487825 TRAV30A0A087WSZ9 112 aa2.74□□□□□ -1.97
BRCA1-217ENST00000487825 H3BMQ9 156 aa2.74□□□□□ -1.97
BRCA1-217ENST00000487825 H7BYZ3 331 aa2.74□□□□□ -1.97
BRCA1-217ENST00000487825 CORTO00230 105 aa2.74□□□□□ -1.97
BRCA1-217ENST00000487825 IL4P05112 153 aa2.74□□□□□ -1.97
BRCA1-217ENST00000487825 LIMS3P0CW19 117 aa2.74□□□□□ -1.97
BRCA1-217ENST00000487825 LIMS4P0CW20 117 aa2.74□□□□□ -1.97
BRCA1-217ENST00000487825 SRIP30626 198 aa2.74□□□□□ -1.97
BRCA1-217ENST00000487825 POLR2IP36954 125 aaKnown RBP2.74□□□□□ -1.97
BRCA1-217ENST00000487825 WNT4P56705 351 aa2.74□□□□□ -1.97
BRCA1-217ENST00000487825 OR10A3P58181 314 aa2.74□□□□□ -1.97
BRCA1-217ENST00000487825 CATR1Q13166 79 aa2.74□□□□□ -1.97
BRCA1-217ENST00000487825 RAB31Q13636 194 aa2.74□□□□□ -1.97
BRCA1-217ENST00000487825 SMCO1Q147U7 214 aa2.74□□□□□ -1.97
BRCA1-217ENST00000487825 MSMO1Q15800 293 aa2.74□□□□□ -1.97
BRCA1-217ENST00000487825 HES5Q5TA89 166 aa2.74□□□□□ -1.97
BRCA1-217ENST00000487825 SAMD13Q5VXD3 122 aa2.74□□□□□ -1.97
BRCA1-217ENST00000487825 FAM19A1Q7Z5A9 133 aa2.74□□□□□ -1.97
BRCA1-217ENST00000487825 DEFB107AQ8IZN7 70 aa2.74□□□□□ -1.97
BRCA1-217ENST00000487825 TRUB1Q8WWH5 349 aaKnown RBP2.74□□□□□ -1.97
BRCA1-217ENST00000487825 GABARAPL3Q9BY60 117 aa2.74□□□□□ -1.97
BRCA1-217ENST00000487825 SLC25A39Q9BZJ4 359 aaPredicted RBP2.74□□□□□ -1.97
BRCA1-217ENST00000487825 ARL6Q9H0F7 186 aa2.74□□□□□ -1.97
BRCA1-217ENST00000487825 IFT46Q9NQC8 304 aa2.74□□□□□ -1.97
BRCA1-217ENST00000487825 FKBP11Q9NYL4 201 aa2.74□□□□□ -1.97
BRCA1-217ENST00000487825 PRNDQ9UKY0 176 aa2.74□□□□□ -1.97
BRCA1-217ENST00000487825 RAB26Q9ULW5 256 aa2.74□□□□□ -1.97
BRCA1-217ENST00000487825 A0A1B0GV72 72 aa2.73□□□□□ -1.97
BRCA1-217ENST00000487825 SSNA1O43805 119 aa2.73□□□□□ -1.97
BRCA1-217ENST00000487825 SNAPC5O75971 98 aa2.73□□□□□ -1.97
BRCA1-217ENST00000487825 SNRPCP09234 159 aaKnown RBP2.73□□□□□ -1.97
BRCA1-217ENST00000487825 IGLC1P0CG04 106 aa2.73□□□□□ -1.97
BRCA1-217ENST00000487825 YPEL3P61236 119 aaPredicted RBP2.73□□□□□ -1.97
BRCA1-217ENST00000487825 CIRBPQ14011 172 aaKnown RBP2.73□□□□□ -1.97
BRCA1-217ENST00000487825 ZNF846Q147U1 533 aa2.73□□□□□ -1.97
BRCA1-217ENST00000487825 PRR4Q16378 134 aa2.73□□□□□ -1.97
BRCA1-217ENST00000487825 TRIM16LQ309B1 348 aa2.73□□□□□ -1.97
BRCA1-217ENST00000487825 SPINK6Q6UWN8 80 aa2.73□□□□□ -1.97
BRCA1-217ENST00000487825 LGI3Q8N145 548 aa2.73□□□□□ -1.97
BRCA1-217ENST00000487825 Q8WTZ3 238 aa2.73□□□□□ -1.97
BRCA1-217ENST00000487825 BLNKQ8WV28 456 aa2.73□□□□□ -1.97
BRCA1-217ENST00000487825 C20orf144Q9BQM9 153 aa2.73□□□□□ -1.97
BRCA1-217ENST00000487825 FAM107BQ9H098 131 aa2.73□□□□□ -1.97
BRCA1-217ENST00000487825 GABARAPL1Q9H0R8 117 aa2.73□□□□□ -1.97
BRCA1-217ENST00000487825 CCL28Q9NRJ3 127 aa2.73□□□□□ -1.97
BRCA1-217ENST00000487825 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.73□□□□□ -1.97
BRCA1-217ENST00000487825 HHLA3Q9XRX5 114 aa2.73□□□□□ -1.97
BRCA1-217ENST00000487825 FUT9Q9Y231 359 aa2.73□□□□□ -1.97
BRCA1-217ENST00000487825 TRAV8-3A0A0A6YYJ7 113 aa2.72□□□□□ -1.97
BRCA1-217ENST00000487825 FKBP6O75344 327 aa2.72□□□□□ -1.97
BRCA1-217ENST00000487825 IGHV3-30P01768 117 aa2.72□□□□□ -1.97
BRCA1-217ENST00000487825 IGHV3-33P01772 117 aa2.72□□□□□ -1.97
BRCA1-217ENST00000487825 OR5AC1P0C628 307 aa2.72□□□□□ -1.97
BRCA1-217ENST00000487825 NBEAP1P0C6P0 100 aa2.72□□□□□ -1.97
BRCA1-217ENST00000487825 IGHV3-30-3P0DP02 117 aa2.72□□□□□ -1.97
BRCA1-217ENST00000487825 IGHV3-30-5P0DP03 117 aa2.72□□□□□ -1.97
BRCA1-217ENST00000487825 HIST1H1EP10412 219 aaKnown RBP2.72□□□□□ -1.97
BRCA1-217ENST00000487825 G6PCP35575 357 aa2.72□□□□□ -1.97
BRCA1-217ENST00000487825 OPRK1P41145 380 aa2.72□□□□□ -1.97
BRCA1-217ENST00000487825 RND3P61587 244 aa2.72□□□□□ -1.97
BRCA1-217ENST00000487825 SUPT4H1P63272 117 aaKnown RBP2.72□□□□□ -1.97
BRCA1-217ENST00000487825 PRR3P79522 188 aaKnown RBP2.72□□□□□ -1.97
BRCA1-217ENST00000487825 ERHP84090 104 aaKnown RBP2.72□□□□□ -1.97
BRCA1-217ENST00000487825 RPL19P84098 196 aaKnown RBP2.72□□□□□ -1.97
BRCA1-217ENST00000487825 CD164Q04900 197 aa2.72□□□□□ -1.97
BRCA1-217ENST00000487825 OR2F1Q13607 317 aa2.72□□□□□ -1.97
BRCA1-217ENST00000487825 OR10J3Q5JRS4 329 aa2.72□□□□□ -1.97
BRCA1-217ENST00000487825 TRIQKQ629K1 86 aa2.72□□□□□ -1.97
BRCA1-217ENST00000487825 PRSS48Q7RTY5 328 aa2.72□□□□□ -1.97
BRCA1-217ENST00000487825 BPIFB6Q8NFQ5 453 aa2.72□□□□□ -1.97
BRCA1-217ENST00000487825 OR51H1Q8NH63 302 aa2.72□□□□□ -1.97
BRCA1-217ENST00000487825 ATP6V0E2Q8NHE4 81 aa2.72□□□□□ -1.97
BRCA1-217ENST00000487825 IL22RA2Q969J5 263 aa2.72□□□□□ -1.97
BRCA1-217ENST00000487825 TSC22D3Q99576 134 aa2.72□□□□□ -1.97
BRCA1-217ENST00000487825 TXNDC17Q9BRA2 123 aa2.72□□□□□ -1.97
BRCA1-217ENST00000487825 PPDPFQ9H3Y8 114 aa2.72□□□□□ -1.97
BRCA1-217ENST00000487825 SSPOA2VEC9 5147 aa2.71□□□□□ -1.98
BRCA1-217ENST00000487825 TRGV1A0A0A0MS02 117 aa2.71□□□□□ -1.98
BRCA1-217ENST00000487825 INS-IGF2F8WCM5 200 aa2.71□□□□□ -1.98
BRCA1-217ENST00000487825 G3V2T6 193 aa2.71□□□□□ -1.98
BRCA1-217ENST00000487825 SPINK4O60575 86 aa2.71□□□□□ -1.98
BRCA1-217ENST00000487825 ATP6V1G2O95670 118 aa2.71□□□□□ -1.98
BRCA1-217ENST00000487825 KRASP01116 189 aa2.71□□□□□ -1.98
BRCA1-217ENST00000487825 GCGP01275 180 aa2.71□□□□□ -1.98
BRCA1-217ENST00000487825 IGHV3-53P01767 116 aa2.71□□□□□ -1.98
BRCA1-217ENST00000487825 RNASE2P10153 161 aaKnown RBP2.71□□□□□ -1.98
BRCA1-217ENST00000487825 TBPP20226 339 aa2.71□□□□□ -1.98
BRCA1-217ENST00000487825 PVALBP20472 110 aaPredicted RBP2.71□□□□□ -1.98
BRCA1-217ENST00000487825 PSMA1P25786 263 aaKnown RBP2.71□□□□□ -1.98
BRCA1-217ENST00000487825 PSMB9P28065 219 aa2.71□□□□□ -1.98
BRCA1-217ENST00000487825 OR10J1P30954 320 aa2.71□□□□□ -1.98
BRCA1-217ENST00000487825 HRH1P35367 487 aa2.71□□□□□ -1.98
BRCA1-217ENST00000487825 RPL5P46777 297 aaKnown RBP2.71□□□□□ -1.98
BRCA1-217ENST00000487825 FLI1Q01543 452 aaPredicted RBP2.71□□□□□ -1.98
BRCA1-217ENST00000487825 C1orf194Q5T5A4 169 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms