RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 TMEM75Q8N9X5 138 aa14.15□□□□□ -0.14
HDAC4-209ENST00000487617 RASL10AQ92737 203 aa14.15□□□□□ -0.14
HDAC4-209ENST00000487617 KCNS1Q96KK3 526 aa14.15□□□□□ -0.14
HDAC4-209ENST00000487617 Q9H8V8 135 aa14.15□□□□□ -0.14
HDAC4-209ENST00000487617 HHLA3Q9XRX5 114 aa14.15□□□□□ -0.14
HDAC4-209ENST00000487617 TRGV4A0A0C4DH28 118 aa14.14□□□□□ -0.15
HDAC4-209ENST00000487617 A0A1B0GVY2 172 aa14.14□□□□□ -0.15
HDAC4-209ENST00000487617 MAP1LC3B2A6NCE7 125 aa14.14□□□□□ -0.15
HDAC4-209ENST00000487617 FBLL1A6NHQ2 334 aaKnown RBP14.14□□□□□ -0.15
HDAC4-209ENST00000487617 GCGP01275 180 aa14.14□□□□□ -0.15
HDAC4-209ENST00000487617 ZNF80P51504 273 aaPredicted RBP14.14□□□□□ -0.15
HDAC4-209ENST00000487617 ZNF345Q14585 488 aa14.14□□□□□ -0.15
HDAC4-209ENST00000487617 ZFP69Q49AA0 526 aa14.14□□□□□ -0.15
HDAC4-209ENST00000487617 OR11H4Q8NGC9 324 aa14.14□□□□□ -0.15
HDAC4-209ENST00000487617 MAP1LC3BQ9GZQ8 125 aa14.14□□□□□ -0.15
HDAC4-209ENST00000487617 MRPS16Q9Y3D3 137 aaKnown RBP14.14□□□□□ -0.15
HDAC4-209ENST00000487617 ICOSQ9Y6W8 199 aa14.14□□□□□ -0.15
HDAC4-209ENST00000487617 MUC4Q99102 2169 aa14.13□□□□□ -0.15
HDAC4-209ENST00000487617 TRAV34A0A0B4J273 112 aa14.13□□□□□ -0.15
HDAC4-209ENST00000487617 M0R2P5 195 aa14.13□□□□□ -0.15
HDAC4-209ENST00000487617 SFTA3P0C7M3 94 aa14.13□□□□□ -0.15
HDAC4-209ENST00000487617 CRYBA4P53673 196 aa14.13□□□□□ -0.15
HDAC4-209ENST00000487617 SMUG1Q53HV7 270 aa14.13□□□□□ -0.15
HDAC4-209ENST00000487617 ZNF479Q96JC4 524 aa14.13□□□□□ -0.15
HDAC4-209ENST00000487617 FAM74A7A6NL05 159 aa14.12□□□□□ -0.15
HDAC4-209ENST00000487617 HMSDA8MTL9 139 aa14.12□□□□□ -0.15
HDAC4-209ENST00000487617 PFN1P07737 140 aaKnown RBP14.12□□□□□ -0.15
HDAC4-209ENST00000487617 SAPCD1Q5SSQ6 148 aa14.12□□□□□ -0.15
HDAC4-209ENST00000487617 LINC00479Q96M42 142 aa14.12□□□□□ -0.15
HDAC4-209ENST00000487617 UPK3BQ9BT76 320 aa14.12□□□□□ -0.15
HDAC4-209ENST00000487617 NKX6-2Q9C056 277 aaPredicted RBP14.12□□□□□ -0.15
HDAC4-209ENST00000487617 A0A0D9SG52 128 aa14.11□□□□□ -0.15
HDAC4-209ENST00000487617 PEX7O00628 323 aa14.11□□□□□ -0.15
HDAC4-209ENST00000487617 PPT1P50897 306 aa14.11□□□□□ -0.15
HDAC4-209ENST00000487617 C6orf223Q8N319 242 aa14.11□□□□□ -0.15
HDAC4-209ENST00000487617 STOML3Q8TAV4 291 aa14.11□□□□□ -0.15
HDAC4-209ENST00000487617 C11orf21Q9P2W6 132 aa14.11□□□□□ -0.15
HDAC4-209ENST00000487617 TRAV4A0A0B4J268 109 aa14.1□□□□□ -0.15
HDAC4-209ENST00000487617 OR4C5Q8NGB2 326 aa14.1□□□□□ -0.15
HDAC4-209ENST00000487617 ZNF471Q9BX82 626 aaPredicted RBP14.1□□□□□ -0.15
HDAC4-209ENST00000487617 KANTRA0A1W2PQU2 76 aa14.09□□□□□ -0.15
HDAC4-209ENST00000487617 FHITP49789 147 aa14.09□□□□□ -0.15
HDAC4-209ENST00000487617 MRPL23Q16540 153 aaKnown RBP14.09□□□□□ -0.15
HDAC4-209ENST00000487617 TTC32Q5I0X7 151 aa14.09□□□□□ -0.15
HDAC4-209ENST00000487617 HIST1H2BAQ96A08 127 aa14.09□□□□□ -0.15
HDAC4-209ENST00000487617 ARL2-SNX15V9GYD0 113 aa14.09□□□□□ -0.15
HDAC4-209ENST00000487617 BCL2L11O43521 198 aa14.08□□□□□ -0.16
HDAC4-209ENST00000487617 SEC11BP0C7V7 166 aa14.08□□□□□ -0.16
HDAC4-209ENST00000487617 C9JCJ5 164 aa14.07□□□□□ -0.16
HDAC4-209ENST00000487617 CST9LP1Q5W188 147 aa14.07□□□□□ -0.16
HDAC4-209ENST00000487617 FAM213BQ8TBF2 198 aa14.07□□□□□ -0.16
HDAC4-209ENST00000487617 PCNPQ8WW12 178 aaKnown RBP14.07□□□□□ -0.16
HDAC4-209ENST00000487617 DNAH2Q9P225 4427 aa14.06□□□□□ -0.16
HDAC4-209ENST00000487617 UMAD1C9J7I0 102 aa14.06□□□□□ -0.16
HDAC4-209ENST00000487617 GYPEP15421 78 aa14.06□□□□□ -0.16
HDAC4-209ENST00000487617 Q86TA4 180 aa14.06□□□□□ -0.16
HDAC4-209ENST00000487617 KRTAP1-5Q9BYS1 174 aa14.06□□□□□ -0.16
HDAC4-209ENST00000487617 HECTD4Q9Y4D8 3996 aa14.06□□□□□ -0.16
HDAC4-209ENST00000487617 K7EQD1 137 aa14.05□□□□□ -0.16
HDAC4-209ENST00000487617 PFDN1O60925 122 aa14.05□□□□□ -0.16
HDAC4-209ENST00000487617 ORM1P02763 201 aa14.05□□□□□ -0.16
HDAC4-209ENST00000487617 SRIP30626 198 aa14.05□□□□□ -0.16
HDAC4-209ENST00000487617 EIF5AP63241 154 aaKnown RBP14.05□□□□□ -0.16
HDAC4-209ENST00000487617 ZNF876PQ49A33 203 aa14.05□□□□□ -0.16
HDAC4-209ENST00000487617 NEGR1Q7Z3B1 354 aa14.05□□□□□ -0.16
HDAC4-209ENST00000487617 SFT2D1Q8WV19 159 aa14.05□□□□□ -0.16
HDAC4-209ENST00000487617 C9orf85Q96MD7 179 aa14.05□□□□□ -0.16
HDAC4-209ENST00000487617 A0A1W2PPQ1 181 aa14.04□□□□□ -0.16
HDAC4-209ENST00000487617 FABP5P3A8MUU1 101 aa14.04□□□□□ -0.16
HDAC4-209ENST00000487617 NXPH4O95158 308 aa14.04□□□□□ -0.16
HDAC4-209ENST00000487617 TNP2Q05952 138 aa14.04□□□□□ -0.16
HDAC4-209ENST00000487617 LYPD5Q6UWN5 251 aa14.04□□□□□ -0.16
HDAC4-209ENST00000487617 TMUB2Q71RG4 321 aa14.04□□□□□ -0.16
HDAC4-209ENST00000487617 A0A1B0GV50 99 aa14.03□□□□□ -0.16
HDAC4-209ENST00000487617 SIVA1O15304 175 aa14.03□□□□□ -0.16
HDAC4-209ENST00000487617 PAGE4O60829 102 aa14.03□□□□□ -0.16
HDAC4-209ENST00000487617 UBE2G1P62253 170 aa14.03□□□□□ -0.16
HDAC4-209ENST00000487617 MBD3L1Q8WWY6 194 aa14.03□□□□□ -0.16
HDAC4-209ENST00000487617 FMC1Q96HJ9 113 aa14.03□□□□□ -0.16
HDAC4-209ENST00000487617 TCEAL7Q9BRU2 100 aa14.03□□□□□ -0.16
HDAC4-209ENST00000487617 ZFP30Q9Y2G7 519 aa14.03□□□□□ -0.16
HDAC4-209ENST00000487617 FAT2Q9NYQ8 4349 aa14.03□□□□□ -0.16
HDAC4-209ENST00000487617 IGKV3D-20A0A0C4DH25 116 aa14.02□□□□□ -0.17
HDAC4-209ENST00000487617 RNASE3P12724 160 aaKnown RBP14.02□□□□□ -0.17
HDAC4-209ENST00000487617 DPPA3Q6W0C5 159 aa14.02□□□□□ -0.17
HDAC4-209ENST00000487617 DNAH17Q9UFH2 4485 aa14.02□□□□□ -0.17
HDAC4-209ENST00000487617 RS1O15537 224 aa14.01□□□□□ -0.17
HDAC4-209ENST00000487617 TPT1P13693 172 aaKnown RBP14.01□□□□□ -0.17
HDAC4-209ENST00000487617 GATA1P15976 413 aaPredicted RBP14.01□□□□□ -0.17
HDAC4-209ENST00000487617 S100A4P26447 101 aaKnown RBP14.01□□□□□ -0.17
HDAC4-209ENST00000487617 ZNF506Q5JVG8 444 aa14.01□□□□□ -0.17
HDAC4-209ENST00000487617 ZC2HC1AQ96GY0 325 aa14.01□□□□□ -0.17
HDAC4-209ENST00000487617 TXNDC17Q9BRA2 123 aa14.01□□□□□ -0.17
HDAC4-209ENST00000487617 LOC100131303A0A0U1RQF7 123 aa14□□□□□ -0.17
HDAC4-209ENST00000487617 PGPEP1LA6NFU8 196 aa14□□□□□ -0.17
HDAC4-209ENST00000487617 ASIPP42127 132 aa14□□□□□ -0.17
HDAC4-209ENST00000487617 AKR1C3P42330 323 aa14□□□□□ -0.17
HDAC4-209ENST00000487617 CFAP126Q5VTH2 177 aa14□□□□□ -0.17
HDAC4-209ENST00000487617 PTH2Q96A98 100 aa14□□□□□ -0.17
HDAC4-209ENST00000487617 B4DEV8 164 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms