RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 RNASE8Q8TDE3 154 aaKnown RBP7.65□□□□□ -1.18
TOP3B-216ENST00000487485 TMEM263Q8WUH6 116 aaKnown RBP7.65□□□□□ -1.18
TOP3B-216ENST00000487485 C16orf74Q96GX8 76 aa7.65□□□□□ -1.18
TOP3B-216ENST00000487485 ZC2HC1AQ96GY0 325 aa7.65□□□□□ -1.18
TOP3B-216ENST00000487485 NAGKQ9UJ70 344 aa7.65□□□□□ -1.18
TOP3B-216ENST00000487485 TP53TG3Q9ULZ0 132 aa7.65□□□□□ -1.18
TOP3B-216ENST00000487485 PLAC8L1A1L4L8 177 aa7.64□□□□□ -1.19
TOP3B-216ENST00000487485 CXorf65A6NEN9 183 aa7.64□□□□□ -1.19
TOP3B-216ENST00000487485 TMEM250H0YL14 139 aa7.64□□□□□ -1.19
TOP3B-216ENST00000487485 NDUFS6O75380 124 aaKnown RBP7.64□□□□□ -1.19
TOP3B-216ENST00000487485 CRIP1P50238 77 aa7.64□□□□□ -1.19
TOP3B-216ENST00000487485 CLLU1Q5K131 121 aa7.64□□□□□ -1.19
TOP3B-216ENST00000487485 C11orf45Q8TAV5 145 aa7.64□□□□□ -1.19
TOP3B-216ENST00000487485 MLST8Q9BVC4 326 aa7.64□□□□□ -1.19
TOP3B-216ENST00000487485 SNURFLB1AK76 121 aa7.63□□□□□ -1.19
TOP3B-216ENST00000487485 GNRH2O43555 120 aa7.63□□□□□ -1.19
TOP3B-216ENST00000487485 SRP19P09132 144 aaKnown RBP7.63□□□□□ -1.19
TOP3B-216ENST00000487485 SPART-AS1P0CW21 52 aa7.63□□□□□ -1.19
TOP3B-216ENST00000487485 GNG4P50150 75 aa7.63□□□□□ -1.19
TOP3B-216ENST00000487485 CEBPGP53567 150 aa7.63□□□□□ -1.19
TOP3B-216ENST00000487485 SRSF3P84103 164 aaKnown RBP7.63□□□□□ -1.19
TOP3B-216ENST00000487485 PEA15Q15121 130 aa7.63□□□□□ -1.19
TOP3B-216ENST00000487485 ZNF674Q2M3X9 581 aa7.63□□□□□ -1.19
TOP3B-216ENST00000487485 TDRG1Q3Y452 100 aa7.63□□□□□ -1.19
TOP3B-216ENST00000487485 CENPWQ5EE01 88 aa7.63□□□□□ -1.19
TOP3B-216ENST00000487485 FAM222AQ5U5X8 452 aa7.63□□□□□ -1.19
TOP3B-216ENST00000487485 KCNS1Q96KK3 526 aa7.63□□□□□ -1.19
TOP3B-216ENST00000487485 PARLQ9H300 379 aa7.63□□□□□ -1.19
TOP3B-216ENST00000487485 C11orf21Q9P2W6 132 aa7.63□□□□□ -1.19
TOP3B-216ENST00000487485 DKK2Q9UBU2 259 aa7.63□□□□□ -1.19
TOP3B-216ENST00000487485 CELA1Q9UNI1 258 aa7.63□□□□□ -1.19
TOP3B-216ENST00000487485 TIMM8BQ9Y5J9 83 aaPredicted RBP7.63□□□□□ -1.19
TOP3B-216ENST00000487485 MUC4Q99102 2169 aa7.62□□□□□ -1.19
TOP3B-216ENST00000487485 TRBV20OR9-2A0A075B6H5 130 aa7.62□□□□□ -1.19
TOP3B-216ENST00000487485 PGPEP1LA6NFU8 196 aa7.62□□□□□ -1.19
TOP3B-216ENST00000487485 SH2D1AO60880 128 aa7.62□□□□□ -1.19
TOP3B-216ENST00000487485 IGLV2-8P01709 118 aa7.62□□□□□ -1.19
TOP3B-216ENST00000487485 NANOS2P60321 138 aaKnown RBP7.62□□□□□ -1.19
TOP3B-216ENST00000487485 FAM162BQ5T6X4 162 aa7.62□□□□□ -1.19
TOP3B-216ENST00000487485 C11orf72Q8NBR9 251 aa7.62□□□□□ -1.19
TOP3B-216ENST00000487485 SMDT1Q9H4I9 107 aa7.62□□□□□ -1.19
TOP3B-216ENST00000487485 SDF2L1Q9HCN8 221 aa7.62□□□□□ -1.19
TOP3B-216ENST00000487485 NOP10Q9NPE3 64 aaKnown RBP7.62□□□□□ -1.19
TOP3B-216ENST00000487485 GSN-AS1Q9NRJ2 163 aa7.62□□□□□ -1.19
TOP3B-216ENST00000487485 TRGV11A0A075B6L2 103 aa7.61□□□□□ -1.19
TOP3B-216ENST00000487485 IGKV3D-20A0A0C4DH25 116 aa7.61□□□□□ -1.19
TOP3B-216ENST00000487485 LYRM9A8MSI8 78 aa7.61□□□□□ -1.19
TOP3B-216ENST00000487485 C9JCJ5 164 aa7.61□□□□□ -1.19
TOP3B-216ENST00000487485 C9JQL5 133 aa7.61□□□□□ -1.19
TOP3B-216ENST00000487485 ORM1P02763 201 aa7.61□□□□□ -1.19
TOP3B-216ENST00000487485 TYMSP04818 313 aa7.61□□□□□ -1.19
TOP3B-216ENST00000487485 MGST1P10620 155 aaKnown RBP7.61□□□□□ -1.19
TOP3B-216ENST00000487485 C12orf74Q32Q52 190 aa7.61□□□□□ -1.19
TOP3B-216ENST00000487485 IBA57Q5T440 356 aaKnown RBP7.61□□□□□ -1.19
TOP3B-216ENST00000487485 PRR27Q6MZM9 219 aa7.61□□□□□ -1.19
TOP3B-216ENST00000487485 SMIM12Q96EX1 92 aa7.61□□□□□ -1.19
TOP3B-216ENST00000487485 MDFICQ9P1T7 246 aa7.61□□□□□ -1.19
TOP3B-216ENST00000487485 TEX48A0A1B0GUV7 120 aa7.6□□□□□ -1.19
TOP3B-216ENST00000487485 B4DEV8 164 aa7.6□□□□□ -1.19
TOP3B-216ENST00000487485 TCL1AP56279 114 aa7.6□□□□□ -1.19
TOP3B-216ENST00000487485 ZNF415Q09FC8 603 aa7.6□□□□□ -1.19
TOP3B-216ENST00000487485 DAZ2Q13117 558 aaKnown RBP7.6□□□□□ -1.19
TOP3B-216ENST00000487485 OCC1Q8TAD7 63 aa7.6□□□□□ -1.19
TOP3B-216ENST00000487485 VPS13DQ5THJ4 4388 aa7.6□□□□□ -1.19
TOP3B-216ENST00000487485 IGHV3-16A0A0C4DH30 117 aa7.59□□□□□ -1.19
TOP3B-216ENST00000487485 ZNF727A8MUV8 499 aa7.59□□□□□ -1.19
TOP3B-216ENST00000487485 KRBOX1C9JBD0 128 aa7.59□□□□□ -1.19
TOP3B-216ENST00000487485 M0R036 132 aa7.59□□□□□ -1.19
TOP3B-216ENST00000487485 DEFB130BP0DP73 79 aa7.59□□□□□ -1.19
TOP3B-216ENST00000487485 DEFB130AP0DP74 79 aa7.59□□□□□ -1.19
TOP3B-216ENST00000487485 DAD1P61803 113 aa7.59□□□□□ -1.19
TOP3B-216ENST00000487485 Q6ZTC4 211 aa7.59□□□□□ -1.19
TOP3B-216ENST00000487485 DAZAP1Q96EP5 407 aaKnown RBP7.59□□□□□ -1.19
TOP3B-216ENST00000487485 SMIM7Q9BQ49 75 aa7.59□□□□□ -1.19
TOP3B-216ENST00000487485 SPXQ9BT56 116 aa7.59□□□□□ -1.19
TOP3B-216ENST00000487485 BIN3Q9NQY0 253 aa7.59□□□□□ -1.19
TOP3B-216ENST00000487485 ABCA13Q86UQ4 5058 aa7.59□□□□□ -1.19
TOP3B-216ENST00000487485 TMSB15BA0A087X1C1 80 aa7.58□□□□□ -1.2
TOP3B-216ENST00000487485 SPINK4O60575 86 aa7.58□□□□□ -1.2
TOP3B-216ENST00000487485 OR5I1Q13606 314 aa7.58□□□□□ -1.2
TOP3B-216ENST00000487485 LINC01559Q495D7 138 aa7.58□□□□□ -1.2
TOP3B-216ENST00000487485 Q6ZTI0 123 aa7.58□□□□□ -1.2
TOP3B-216ENST00000487485 PHLDA1Q8WV24 401 aaPredicted RBP7.58□□□□□ -1.2
TOP3B-216ENST00000487485 DNAH6Q9C0G6 4158 aa7.58□□□□□ -1.2
TOP3B-216ENST00000487485 TRGV1A0A0A0MS02 117 aa7.57□□□□□ -1.2
TOP3B-216ENST00000487485 GAGE12BA1L429 117 aa7.57□□□□□ -1.2
TOP3B-216ENST00000487485 GRIFINA4D1Z8 144 aa7.57□□□□□ -1.2
TOP3B-216ENST00000487485 C19orf71A6NCJ1 209 aa7.57□□□□□ -1.2
TOP3B-216ENST00000487485 K7EN84 100 aa7.57□□□□□ -1.2
TOP3B-216ENST00000487485 GAGE7O76087 117 aa7.57□□□□□ -1.2
TOP3B-216ENST00000487485 GAGE12FP0CL80 117 aa7.57□□□□□ -1.2
TOP3B-216ENST00000487485 GAGE12GP0CL81 117 aa7.57□□□□□ -1.2
TOP3B-216ENST00000487485 GAGE12IP0CL82 117 aa7.57□□□□□ -1.2
TOP3B-216ENST00000487485 RNASE3P12724 160 aaKnown RBP7.57□□□□□ -1.2
TOP3B-216ENST00000487485 S100A4P26447 101 aaKnown RBP7.57□□□□□ -1.2
TOP3B-216ENST00000487485 ASIPP42127 132 aa7.57□□□□□ -1.2
TOP3B-216ENST00000487485 RPL19P84098 196 aaKnown RBP7.57□□□□□ -1.2
TOP3B-216ENST00000487485 LGALS9BQ3B8N2 356 aa7.57□□□□□ -1.2
TOP3B-216ENST00000487485 FAM74A3Q4VXF1 159 aa7.57□□□□□ -1.2
TOP3B-216ENST00000487485 DNLZQ5SXM8 178 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms