RNA–Protein interactions for RNA: ENST00000487428.1

PTPRE-209, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-209ENST00000487428 ZNF80P51504 273 aaPredicted RBP4.73□□□□□ -1.65
PTPRE-209ENST00000487428 ZNF415Q09FC8 603 aa4.73□□□□□ -1.65
PTPRE-209ENST00000487428 LINC01559Q495D7 138 aa4.73□□□□□ -1.65
PTPRE-209ENST00000487428 FAM162BQ5T6X4 162 aa4.73□□□□□ -1.65
PTPRE-209ENST00000487428 FAM222AQ5U5X8 452 aa4.73□□□□□ -1.65
PTPRE-209ENST00000487428 PRNTQ86SH4 94 aa4.73□□□□□ -1.65
PTPRE-209ENST00000487428 ZC2HC1AQ96GY0 325 aa4.73□□□□□ -1.65
PTPRE-209ENST00000487428 LINC00479Q96M42 142 aa4.73□□□□□ -1.65
PTPRE-209ENST00000487428 C9orf85Q96MD7 179 aa4.73□□□□□ -1.65
PTPRE-209ENST00000487428 KLK5Q9Y337 293 aaPredicted RBP4.73□□□□□ -1.65
PTPRE-209ENST00000487428 STARD9Q9P2P6 4700 aa4.73□□□□□ -1.65
PTPRE-209ENST00000487428 TRAV34A0A0B4J273 112 aa4.72□□□□□ -1.65
PTPRE-209ENST00000487428 IGHV3-16A0A0C4DH30 117 aa4.72□□□□□ -1.65
PTPRE-209ENST00000487428 IGLV2-8P01709 118 aa4.72□□□□□ -1.65
PTPRE-209ENST00000487428 CRIP1P50238 77 aa4.72□□□□□ -1.65
PTPRE-209ENST00000487428 FAM74A3Q4VXF1 159 aa4.72□□□□□ -1.65
PTPRE-209ENST00000487428 CLLU1Q5K131 121 aa4.72□□□□□ -1.65
PTPRE-209ENST00000487428 ZNF575Q86XF7 245 aa4.72□□□□□ -1.65
PTPRE-209ENST00000487428 BAGE2Q86Y30 109 aa4.72□□□□□ -1.65
PTPRE-209ENST00000487428 PHLDA1Q8WV24 401 aaPredicted RBP4.72□□□□□ -1.65
PTPRE-209ENST00000487428 C8orf49Q96NF6 230 aa4.72□□□□□ -1.65
PTPRE-209ENST00000487428 SSBP4Q9BWG4 385 aaPredicted RBP4.72□□□□□ -1.65
PTPRE-209ENST00000487428 SDF2L1Q9HCN8 221 aa4.72□□□□□ -1.65
PTPRE-209ENST00000487428 SCRT2Q9NQ03 307 aa4.72□□□□□ -1.65
PTPRE-209ENST00000487428 MED9Q9NWA0 146 aa4.72□□□□□ -1.65
PTPRE-209ENST00000487428 IL36BQ9NZH7 164 aa4.72□□□□□ -1.65
PTPRE-209ENST00000487428 C11orf21Q9P2W6 132 aa4.72□□□□□ -1.65
PTPRE-209ENST00000487428 RPH3ALQ9UNE2 315 aa4.72□□□□□ -1.65
PTPRE-209ENST00000487428 CELA1Q9UNI1 258 aa4.72□□□□□ -1.65
PTPRE-209ENST00000487428 TRBV20OR9-2A0A075B6H5 130 aa4.71□□□□□ -1.66
PTPRE-209ENST00000487428 IGKV3D-20A0A0C4DH25 116 aa4.71□□□□□ -1.66
PTPRE-209ENST00000487428 RAB19A4D1S5 217 aa4.71□□□□□ -1.66
PTPRE-209ENST00000487428 C19orf71A6NCJ1 209 aa4.71□□□□□ -1.66
PTPRE-209ENST00000487428 KRBOX1C9JBD0 128 aa4.71□□□□□ -1.66
PTPRE-209ENST00000487428 M0R2P5 195 aa4.71□□□□□ -1.66
PTPRE-209ENST00000487428 TYMSP04818 313 aa4.71□□□□□ -1.66
PTPRE-209ENST00000487428 ATP5G1P05496 136 aa4.71□□□□□ -1.66
PTPRE-209ENST00000487428 RNASE3P12724 160 aaKnown RBP4.71□□□□□ -1.66
PTPRE-209ENST00000487428 NANOS2P60321 138 aaKnown RBP4.71□□□□□ -1.66
PTPRE-209ENST00000487428 DAD1P61803 113 aa4.71□□□□□ -1.66
PTPRE-209ENST00000487428 SLAQ13239 276 aa4.71□□□□□ -1.66
PTPRE-209ENST00000487428 Q6ZTC4 211 aa4.71□□□□□ -1.66
PTPRE-209ENST00000487428 NOP10Q9NPE3 64 aaKnown RBP4.71□□□□□ -1.66
PTPRE-209ENST00000487428 GSN-AS1Q9NRJ2 163 aa4.71□□□□□ -1.66
PTPRE-209ENST00000487428 DEFB131BA0A096LNP1 70 aa4.7□□□□□ -1.66
PTPRE-209ENST00000487428 A0A1B0GV50 99 aa4.7□□□□□ -1.66
PTPRE-209ENST00000487428 J3KRW8 73 aa4.7□□□□□ -1.66
PTPRE-209ENST00000487428 DEFB4AO15263 64 aa4.7□□□□□ -1.66
PTPRE-209ENST00000487428 SNAI2O43623 268 aa4.7□□□□□ -1.66
PTPRE-209ENST00000487428 SH2D1AO60880 128 aa4.7□□□□□ -1.66
PTPRE-209ENST00000487428 NXPH4O95158 308 aa4.7□□□□□ -1.66
PTPRE-209ENST00000487428 SRP19P09132 144 aaKnown RBP4.7□□□□□ -1.66
PTPRE-209ENST00000487428 OR5AL1P0C617 328 aa4.7□□□□□ -1.66
PTPRE-209ENST00000487428 PRB4P10163 310 aaPredicted RBP4.7□□□□□ -1.66
PTPRE-209ENST00000487428 GNG4P50150 75 aa4.7□□□□□ -1.66
PTPRE-209ENST00000487428 RPS20P60866 119 aaKnown RBP4.7□□□□□ -1.66
PTPRE-209ENST00000487428 RAB14P61106 215 aa4.7□□□□□ -1.66
PTPRE-209ENST00000487428 IFITM2Q01629 132 aa4.7□□□□□ -1.66
PTPRE-209ENST00000487428 PEA15Q15121 130 aa4.7□□□□□ -1.66
PTPRE-209ENST00000487428 CENPWQ5EE01 88 aa4.7□□□□□ -1.66
PTPRE-209ENST00000487428 CT83Q5H943 113 aa4.7□□□□□ -1.66
PTPRE-209ENST00000487428 WDR73Q6P4I2 378 aa4.7□□□□□ -1.66
PTPRE-209ENST00000487428 Q6ZQT7 251 aa4.7□□□□□ -1.66
PTPRE-209ENST00000487428 FAM231DQ6ZW35 169 aa4.7□□□□□ -1.66
PTPRE-209ENST00000487428 C15orf53Q8NAA6 179 aa4.7□□□□□ -1.66
PTPRE-209ENST00000487428 SGK494Q96LW2 274 aa4.7□□□□□ -1.66
PTPRE-209ENST00000487428 DERL1Q9BUN8 251 aa4.7□□□□□ -1.66
PTPRE-209ENST00000487428 PARLQ9H300 379 aa4.7□□□□□ -1.66
PTPRE-209ENST00000487428 LYSTQ99698 3801 aa4.69□□□□□ -1.66
PTPRE-209ENST00000487428 IGHV4-4A0A075B6R2 117 aa4.69□□□□□ -1.66
PTPRE-209ENST00000487428 TRAV4A0A0B4J268 109 aa4.69□□□□□ -1.66
PTPRE-209ENST00000487428 FAM231BA6NCW3 169 aa4.69□□□□□ -1.66
PTPRE-209ENST00000487428 B4DEV8 164 aa4.69□□□□□ -1.66
PTPRE-209ENST00000487428 PRM2P04554 102 aa4.69□□□□□ -1.66
PTPRE-209ENST00000487428 ASIPP42127 132 aa4.69□□□□□ -1.66
PTPRE-209ENST00000487428 FAM3BP58499 235 aaPredicted RBP4.69□□□□□ -1.66
PTPRE-209ENST00000487428 TOR2AQ5JU69 321 aa4.69□□□□□ -1.66
PTPRE-209ENST00000487428 MUC21Q5SSG8 566 aa4.69□□□□□ -1.66
PTPRE-209ENST00000487428 ZFP2Q6ZN57 461 aa4.69□□□□□ -1.66
PTPRE-209ENST00000487428 Q6ZTI0 123 aa4.69□□□□□ -1.66
PTPRE-209ENST00000487428 CNFNQ9BYD5 112 aa4.69□□□□□ -1.66
PTPRE-209ENST00000487428 EIF5A2Q9GZV4 153 aaKnown RBP4.69□□□□□ -1.66
PTPRE-209ENST00000487428 MDFICQ9P1T7 246 aa4.69□□□□□ -1.66
PTPRE-209ENST00000487428 APLNQ9ULZ1 77 aa4.69□□□□□ -1.66
PTPRE-209ENST00000487428 A0A1W2PPQ1 181 aa4.68□□□□□ -1.66
PTPRE-209ENST00000487428 XKRY2A2RUG3 117 aa4.68□□□□□ -1.66
PTPRE-209ENST00000487428 A8MWV9 139 aa4.68□□□□□ -1.66
PTPRE-209ENST00000487428 F2Z2F3 143 aa4.68□□□□□ -1.66
PTPRE-209ENST00000487428 GNRH2O43555 120 aa4.68□□□□□ -1.66
PTPRE-209ENST00000487428 IGLC6P0CF74 106 aa4.68□□□□□ -1.66
PTPRE-209ENST00000487428 HTN1P15515 57 aa4.68□□□□□ -1.66
PTPRE-209ENST00000487428 EMP1P54849 157 aa4.68□□□□□ -1.66
PTPRE-209ENST00000487428 FOXA3P55318 350 aaPredicted RBP4.68□□□□□ -1.66
PTPRE-209ENST00000487428 LGALS9CQ6DKI2 356 aa4.68□□□□□ -1.66
PTPRE-209ENST00000487428 UQCC3Q6UW78 93 aa4.68□□□□□ -1.66
PTPRE-209ENST00000487428 OCC1Q8TAD7 63 aa4.68□□□□□ -1.66
PTPRE-209ENST00000487428 TRGV2A0A075B6R0 118 aa4.67□□□□□ -1.66
PTPRE-209ENST00000487428 TRGV1A0A0A0MS02 117 aa4.67□□□□□ -1.66
PTPRE-209ENST00000487428 PGPEP1LA6NFU8 196 aa4.67□□□□□ -1.66
PTPRE-209ENST00000487428 RHODO00212 210 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms