RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 OR10J6PQ8NGY7 276 aa9.34□□□□□ -0.91
PTCD2-204ENST00000486995 AVPP01185 164 aa9.34□□□□□ -0.91
PTCD2-204ENST00000486995 IGLV1-40P01703 118 aa9.34□□□□□ -0.91
PTCD2-204ENST00000486995 PRSS1P07477 247 aa9.34□□□□□ -0.91
PTCD2-204ENST00000486995 RNASE8Q8TDE3 154 aaKnown RBP9.34□□□□□ -0.91
PTCD2-204ENST00000486995 FAM19A4Q96LR4 140 aa9.34□□□□□ -0.91
PTCD2-204ENST00000486995 SIVA1O15304 175 aa9.33□□□□□ -0.92
PTCD2-204ENST00000486995 SMIM17P0DL12 118 aa9.33□□□□□ -0.92
PTCD2-204ENST00000486995 NMUP48645 174 aa9.33□□□□□ -0.92
PTCD2-204ENST00000486995 SEC11AP67812 179 aa9.33□□□□□ -0.92
PTCD2-204ENST00000486995 OR9G4Q8NGQ1 327 aa9.33□□□□□ -0.92
PTCD2-204ENST00000486995 TRAV21A0A0B4J279 112 aa9.33□□□□□ -0.92
PTCD2-204ENST00000486995 A1L4Q6 167 aa9.33□□□□□ -0.92
PTCD2-204ENST00000486995 K7EP13 123 aa9.33□□□□□ -0.92
PTCD2-204ENST00000486995 SPRY2O43597 315 aa9.33□□□□□ -0.92
PTCD2-204ENST00000486995 RPL11P62913 178 aaKnown RBP9.33□□□□□ -0.92
PTCD2-204ENST00000486995 LAGE3Q14657 143 aa9.33□□□□□ -0.92
PTCD2-204ENST00000486995 TM4SF20Q53R12 229 aa9.33□□□□□ -0.92
PTCD2-204ENST00000486995 ADAMTSL5Q6ZMM2 481 aa9.33□□□□□ -0.92
PTCD2-204ENST00000486995 SPG11Q96JI7 2443 aa9.32□□□□□ -0.92
PTCD2-204ENST00000486995 MAP1AP78559 2803 aaPredicted RBP9.32□□□□□ -0.92
PTCD2-204ENST00000486995 F6UB75 175 aa9.32□□□□□ -0.92
PTCD2-204ENST00000486995 CDKN1BP46527 198 aa9.32□□□□□ -0.92
PTCD2-204ENST00000486995 OR4C5Q8NGB2 326 aa9.32□□□□□ -0.92
PTCD2-204ENST00000486995 RHPN1-AS1Q9BWJ2 59 aa9.32□□□□□ -0.92
PTCD2-204ENST00000486995 CELSR2Q9HCU4 2923 aa9.32□□□□□ -0.92
PTCD2-204ENST00000486995 CFHR3Q02985 330 aa9.32□□□□□ -0.92
PTCD2-204ENST00000486995 KIR3DS1Q14943 382 aa9.32□□□□□ -0.92
PTCD2-204ENST00000486995 AMMECR1LQ6DCA0 310 aa9.32□□□□□ -0.92
PTCD2-204ENST00000486995 FOXC2Q99958 501 aa9.32□□□□□ -0.92
PTCD2-204ENST00000486995 IGKV3-7A0A075B6H7 116 aa9.31□□□□□ -0.92
PTCD2-204ENST00000486995 IGKV2D-26A0A0A0MRZ7 120 aa9.31□□□□□ -0.92
PTCD2-204ENST00000486995 A0A0G2JLM5 398 aa9.31□□□□□ -0.92
PTCD2-204ENST00000486995 C7orf71A4D174 169 aa9.31□□□□□ -0.92
PTCD2-204ENST00000486995 ANXA2RQ3ZCQ2 193 aa9.31□□□□□ -0.92
PTCD2-204ENST00000486995 MRAP2Q96G30 205 aa9.31□□□□□ -0.92
PTCD2-204ENST00000486995 SELENOKQ9Y6D0 94 aa9.31□□□□□ -0.92
PTCD2-204ENST00000486995 TRAV8-6A0A0B4J262 113 aa9.31□□□□□ -0.92
PTCD2-204ENST00000486995 M0R381 172 aa9.31□□□□□ -0.92
PTCD2-204ENST00000486995 ATP5LO75964 103 aa9.31□□□□□ -0.92
PTCD2-204ENST00000486995 IGKCP01834 107 aa9.31□□□□□ -0.92
PTCD2-204ENST00000486995 HSD52Q0P140 79 aa9.31□□□□□ -0.92
PTCD2-204ENST00000486995 APRG1Q8IVJ8 170 aa9.31□□□□□ -0.92
PTCD2-204ENST00000486995 RNASE4P34096 147 aaKnown RBP9.3□□□□□ -0.92
PTCD2-204ENST00000486995 SRSF1Q07955 248 aaKnown RBP eCLIP9.3□□□□□ -0.92
PTCD2-204ENST00000486995 DAZ1Q9NQZ3 744 aaKnown RBP9.3□□□□□ -0.92
PTCD2-204ENST00000486995 SMPXQ9UHP9 88 aa9.3□□□□□ -0.92
PTCD2-204ENST00000486995 EDN2P20800 178 aa9.3□□□□□ -0.92
PTCD2-204ENST00000486995 S100A4P26447 101 aaKnown RBP9.3□□□□□ -0.92
PTCD2-204ENST00000486995 ASIPP42127 132 aa9.3□□□□□ -0.92
PTCD2-204ENST00000486995 PSMG4Q5JS54 123 aa9.3□□□□□ -0.92
PTCD2-204ENST00000486995 MYOZ3Q8TDC0 251 aa9.3□□□□□ -0.92
PTCD2-204ENST00000486995 PEF1Q9UBV8 284 aaKnown RBP9.3□□□□□ -0.92
PTCD2-204ENST00000486995 TMEM8BA6NDV4 472 aa9.29□□□□□ -0.92
PTCD2-204ENST00000486995 B4DSR2 109 aa9.29□□□□□ -0.92
PTCD2-204ENST00000486995 GNRH2O43555 120 aa9.29□□□□□ -0.92
PTCD2-204ENST00000486995 FLNCQ14315 2725 aa9.29□□□□□ -0.92
PTCD2-204ENST00000486995 DPM2O94777 84 aa9.29□□□□□ -0.92
PTCD2-204ENST00000486995 SRD5A1P18405 259 aa9.29□□□□□ -0.92
PTCD2-204ENST00000486995 TMEM95Q3KNT9 176 aa9.29□□□□□ -0.92
PTCD2-204ENST00000486995 RASL10AQ92737 203 aa9.29□□□□□ -0.92
PTCD2-204ENST00000486995 SMIM2Q9BVW6 85 aa9.29□□□□□ -0.92
PTCD2-204ENST00000486995 TTTY13Q9BZ97 58 aa9.29□□□□□ -0.92
PTCD2-204ENST00000486995 PIEZO1Q92508 2521 aa9.29□□□□□ -0.92
PTCD2-204ENST00000486995 TRBV7-9A0A0J9YWB2 115 aa9.28□□□□□ -0.92
PTCD2-204ENST00000486995 GTSCR1Q86UQ5 136 aa9.28□□□□□ -0.92
PTCD2-204ENST00000486995 C14orf178Q8N769 122 aaPredicted RBP9.28□□□□□ -0.92
PTCD2-204ENST00000486995 DPH3P1Q9H4G8 78 aa9.28□□□□□ -0.92
PTCD2-204ENST00000486995 MRPL35Q9NZE8 188 aaKnown RBP9.28□□□□□ -0.92
PTCD2-204ENST00000486995 PHLDA3Q9Y5J5 127 aa9.28□□□□□ -0.92
PTCD2-204ENST00000486995 DOPEY1Q5JWR5 2465 aa9.28□□□□□ -0.92
PTCD2-204ENST00000486995 H3BRM9 83 aa9.28□□□□□ -0.92
PTCD2-204ENST00000486995 MED14OSP0DP75 135 aa9.28□□□□□ -0.92
PTCD2-204ENST00000486995 RNASE3P12724 160 aaKnown RBP9.28□□□□□ -0.92
PTCD2-204ENST00000486995 ZC2HC1BQ5TFG8 222 aa9.28□□□□□ -0.92
PTCD2-204ENST00000486995 NRGNQ92686 78 aa9.28□□□□□ -0.92
PTCD2-204ENST00000486995 TMEM160Q9NX00 188 aa9.28□□□□□ -0.92
PTCD2-204ENST00000486995 A6NDN8 102 aa9.27□□□□□ -0.93
PTCD2-204ENST00000486995 K7EMT4 169 aa9.27□□□□□ -0.93
PTCD2-204ENST00000486995 SUMO2P61956 95 aaKnown RBP9.27□□□□□ -0.93
PTCD2-204ENST00000486995 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.27□□□□□ -0.934e-11■■■■■ 35.7
PTCD2-204ENST00000486995 USP9XQ93008 2570 aaPredicted RBP9.27□□□□□ -0.93
PTCD2-204ENST00000486995 RPL39LQ96EH5 51 aaKnown RBP9.27□□□□□ -0.93
PTCD2-204ENST00000486995 A0A087WX48 190 aa9.26□□□□□ -0.93
PTCD2-204ENST00000486995 RNF223E7ERA6 249 aa9.26□□□□□ -0.93
PTCD2-204ENST00000486995 PSMB8P28062 276 aa9.26□□□□□ -0.93
PTCD2-204ENST00000486995 DCANP1Q8TF63 244 aa9.26□□□□□ -0.93
PTCD2-204ENST00000486995 C20orf78Q9BR46 151 aa9.26□□□□□ -0.93
PTCD2-204ENST00000486995 ZNF580Q9UK33 172 aa9.26□□□□□ -0.93
PTCD2-204ENST00000486995 C9orf118A6NHY6 69 aa9.26□□□□□ -0.93
PTCD2-204ENST00000486995 KLLNB2CW77 178 aa9.26□□□□□ -0.93
PTCD2-204ENST00000486995 IGHV4-59P01825 116 aa9.26□□□□□ -0.93
PTCD2-204ENST00000486995 HIGD1BQ9P298 99 aa9.26□□□□□ -0.93
PTCD2-204ENST00000486995 CSMD2Q7Z408 3487 aa9.26□□□□□ -0.93
PTCD2-204ENST00000486995 GATA3P23771 443 aa9.25□□□□□ -0.93
PTCD2-204ENST00000486995 DEFB112Q30KQ8 113 aa9.25□□□□□ -0.93
PTCD2-204ENST00000486995 C10orf99Q6UWK7 81 aa9.25□□□□□ -0.93
PTCD2-204ENST00000486995 CRYBG3Q68DQ2 2970 aa9.25□□□□□ -0.93
PTCD2-204ENST00000486995 IGSF10Q6WRI0 2623 aa9.25□□□□□ -0.93
PTCD2-204ENST00000486995 CACNA1AO00555 2505 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms