RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 A0A1B0GW15 77 aa9.55□□□□□ -0.88
HSPG2-211ENST00000486901 IGLL5B9A064 214 aa9.55□□□□□ -0.88
HSPG2-211ENST00000486901 CDSNQ15517 529 aa9.55□□□□□ -0.88
HSPG2-211ENST00000486901 CEND1Q8N111 149 aa9.55□□□□□ -0.88
HSPG2-211ENST00000486901 IGLC6P0CF74 106 aa9.55□□□□□ -0.88
HSPG2-211ENST00000486901 TMEM219Q86XT9 240 aa9.55□□□□□ -0.88
HSPG2-211ENST00000486901 CLUHP3Q96NS8 147 aa9.55□□□□□ -0.88
HSPG2-211ENST00000486901 C12orf74Q32Q52 190 aa9.55□□□□□ -0.88
HSPG2-211ENST00000486901 C14orf178Q8N769 122 aaPredicted RBP9.55□□□□□ -0.88
HSPG2-211ENST00000486901 OR5A1Q8NGJ0 315 aa9.55□□□□□ -0.88
HSPG2-211ENST00000486901 SPAG8Q99932 426 aaPredicted RBP9.55□□□□□ -0.88
HSPG2-211ENST00000486901 C20orf78Q9BR46 151 aa9.55□□□□□ -0.88
HSPG2-211ENST00000486901 IGLV11-55A0A075B6I3 123 aa9.54□□□□□ -0.88
HSPG2-211ENST00000486901 F6UB75 175 aa9.54□□□□□ -0.88
HSPG2-211ENST00000486901 KAAG1Q9UBP8 84 aa9.54□□□□□ -0.88
HSPG2-211ENST00000486901 CELSR2Q9HCU4 2923 aa9.54□□□□□ -0.88
HSPG2-211ENST00000486901 GAGE12HA6NDE8 117 aa9.54□□□□□ -0.88
HSPG2-211ENST00000486901 HLA-DRB4P13762 266 aa9.54□□□□□ -0.88
HSPG2-211ENST00000486901 ARL3P36405 182 aa9.54□□□□□ -0.88
HSPG2-211ENST00000486901 CD300EQ496F6 205 aaPredicted RBP9.54□□□□□ -0.88
HSPG2-211ENST00000486901 HLA-DRB4X5D2U9 266 aa9.54□□□□□ -0.88
HSPG2-211ENST00000486901 FLNBO75369 2602 aaKnown RBP9.54□□□□□ -0.88
HSPG2-211ENST00000486901 H7C2G1 150 aa9.54□□□□□ -0.88
HSPG2-211ENST00000486901 SCGB1D4Q6XE38 83 aa9.54□□□□□ -0.88
HSPG2-211ENST00000486901 LYPD1Q8N2G4 141 aa9.54□□□□□ -0.88
HSPG2-211ENST00000486901 SIGMAR1Q99720 223 aa9.53□□□□□ -0.88
HSPG2-211ENST00000486901 CEACAM4O75871 244 aa9.53□□□□□ -0.88
HSPG2-211ENST00000486901 S100A4P26447 101 aaKnown RBP9.53□□□□□ -0.88
HSPG2-211ENST00000486901 PRR9Q5T870 116 aa9.52□□□□□ -0.89
HSPG2-211ENST00000486901 PIP4P1Q86T03 277 aa9.52□□□□□ -0.89
HSPG2-211ENST00000486901 TTC9CQ8N5M4 171 aa9.52□□□□□ -0.89
HSPG2-211ENST00000486901 Q8NA96 180 aa9.52□□□□□ -0.89
HSPG2-211ENST00000486901 PHLDA1Q8WV24 401 aaPredicted RBP9.52□□□□□ -0.89
HSPG2-211ENST00000486901 PGPEP1Q9NXJ5 209 aa9.52□□□□□ -0.89
HSPG2-211ENST00000486901 IGHV3-64A0A075B6Q5 118 aa9.52□□□□□ -0.89
HSPG2-211ENST00000486901 LY6LH3BQJ8 138 aa9.52□□□□□ -0.89
HSPG2-211ENST00000486901 SRSF9Q13242 221 aaKnown RBP eCLIP9.52□□□□□ -0.89
HSPG2-211ENST00000486901 ZFP2Q6ZN57 461 aa9.52□□□□□ -0.89
HSPG2-211ENST00000486901 C8orf31Q8N9H6 132 aa9.52□□□□□ -0.89
HSPG2-211ENST00000486901 RAB1BQ9H0U4 201 aa9.52□□□□□ -0.89
HSPG2-211ENST00000486901 PSMB2P49721 201 aa9.52□□□□□ -0.89
HSPG2-211ENST00000486901 LAGE3Q14657 143 aa9.52□□□□□ -0.89
HSPG2-211ENST00000486901 TMEM78Q5T7P6 136 aa9.52□□□□□ -0.89
HSPG2-211ENST00000486901 SCGB3A1Q96QR1 104 aa9.52□□□□□ -0.89
HSPG2-211ENST00000486901 NXT2Q9NPJ8 142 aaKnown RBP9.52□□□□□ -0.89
HSPG2-211ENST00000486901 FLNCQ14315 2725 aa9.51□□□□□ -0.89
HSPG2-211ENST00000486901 IGHV3-11P01762 117 aa9.51□□□□□ -0.89
HSPG2-211ENST00000486901 VMO1Q7Z5L0 202 aa9.51□□□□□ -0.89
HSPG2-211ENST00000486901 SPANXB1Q9NS25 103 aaPredicted RBP9.51□□□□□ -0.89
HSPG2-211ENST00000486901 MRPL16Q9NX20 251 aaKnown RBP9.51□□□□□ -0.89
HSPG2-211ENST00000486901 ATP6V0E1O15342 81 aa9.51□□□□□ -0.89
HSPG2-211ENST00000486901 GAGE13Q4V321 117 aa9.51□□□□□ -0.89
HSPG2-211ENST00000486901 PLEKHB2Q96CS7 222 aa9.51□□□□□ -0.89
HSPG2-211ENST00000486901 B9A039 149 aa9.5□□□□□ -0.89
HSPG2-211ENST00000486901 PDE6HQ13956 83 aa9.5□□□□□ -0.89
HSPG2-211ENST00000486901 CCDC144NLQ6NUI1 221 aa9.5□□□□□ -0.89
HSPG2-211ENST00000486901 FOXI2Q6ZQN5 318 aa9.5□□□□□ -0.89
HSPG2-211ENST00000486901 IGHV7-81A0A0B4J1V7 117 aa9.5□□□□□ -0.89
HSPG2-211ENST00000486901 LINC01549A6NIU2 74 aa9.5□□□□□ -0.89
HSPG2-211ENST00000486901 PRSS47A8MTI9 375 aa9.5□□□□□ -0.89
HSPG2-211ENST00000486901 OR11H12B2RN74 326 aa9.5□□□□□ -0.89
HSPG2-211ENST00000486901 OR11H1Q8NG94 326 aa9.5□□□□□ -0.89
HSPG2-211ENST00000486901 OR11H2Q8NH07 326 aa9.5□□□□□ -0.89
HSPG2-211ENST00000486901 JPT2Q9H910 190 aa9.5□□□□□ -0.89
HSPG2-211ENST00000486901 SIVA1O15304 175 aa9.5□□□□□ -0.89
HSPG2-211ENST00000486901 IGKV3-20P01619 116 aa9.5□□□□□ -0.89
HSPG2-211ENST00000486901 ZFP36P26651 326 aaKnown RBP9.5□□□□□ -0.89
HSPG2-211ENST00000486901 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.5□□□□□ -0.89
HSPG2-211ENST00000486901 TNFRSF14Q92956 283 aa9.5□□□□□ -0.89
HSPG2-211ENST00000486901 C16orf92Q96LL3 132 aa9.5□□□□□ -0.89
HSPG2-211ENST00000486901 SRSF8Q9BRL6 282 aaKnown RBP9.5□□□□□ -0.89
HSPG2-211ENST00000486901 PRSS29PA6NIE9 313 aa9.49□□□□□ -0.89
HSPG2-211ENST00000486901 SLC25A16P16260 332 aa9.49□□□□□ -0.89
HSPG2-211ENST00000486901 IGFL3Q6UXB1 125 aa9.49□□□□□ -0.89
HSPG2-211ENST00000486901 Q8N8P6 123 aa9.49□□□□□ -0.89
HSPG2-211ENST00000486901 GATD1Q8NB37 220 aa9.49□□□□□ -0.89
HSPG2-211ENST00000486901 GNRH2O43555 120 aa9.49□□□□□ -0.89
HSPG2-211ENST00000486901 DPF1Q92782 380 aa9.49□□□□□ -0.89
HSPG2-211ENST00000486901 TRBV6-1A0A0K0K1D8 114 aa9.49□□□□□ -0.89
HSPG2-211ENST00000486901 CEACAM3P40198 252 aa9.49□□□□□ -0.89
HSPG2-211ENST00000486901 ZNF815PA8K554 130 aa9.48□□□□□ -0.89
HSPG2-211ENST00000486901 BUB3O43684 328 aa9.48□□□□□ -0.89
HSPG2-211ENST00000486901 CHTOPQ9Y3Y2 248 aaKnown RBP9.48□□□□□ -0.89
HSPG2-211ENST00000486901 E9PLD3 99 aa9.48□□□□□ -0.89
HSPG2-211ENST00000486901 TRBV12-3P01733 135 aa9.48□□□□□ -0.89
HSPG2-211ENST00000486901 C8orf86Q6ZUL3 223 aa9.48□□□□□ -0.89
HSPG2-211ENST00000486901 NRACQ8N912 160 aa9.48□□□□□ -0.89
HSPG2-211ENST00000486901 MSRB2Q9Y3D2 182 aa9.48□□□□□ -0.89
HSPG2-211ENST00000486901 ZANQ9Y493 2812 aa9.48□□□□□ -0.89
HSPG2-211ENST00000486901 RNASE4P34096 147 aaKnown RBP9.48□□□□□ -0.89
HSPG2-211ENST00000486901 SYT8Q8NBV8 401 aa9.48□□□□□ -0.89
HSPG2-211ENST00000486901 PRADC1Q9BSG0 188 aa9.48□□□□□ -0.89
HSPG2-211ENST00000486901 RAB9AP51151 201 aa9.47□□□□□ -0.89
HSPG2-211ENST00000486901 TIMD4Q96H15 378 aa9.47□□□□□ -0.89
HSPG2-211ENST00000486901 UTP20O75691 2785 aaKnown RBP9.47□□□□□ -0.89
HSPG2-211ENST00000486901 IGLV2-18A0A075B6J9 118 aa9.47□□□□□ -0.89
HSPG2-211ENST00000486901 A0A087WWL8 130 aa9.47□□□□□ -0.89
HSPG2-211ENST00000486901 F5H697 171 aa9.47□□□□□ -0.89
HSPG2-211ENST00000486901 FAM74A4Q5TZK3 123 aa9.47□□□□□ -0.89
HSPG2-211ENST00000486901 MAPK1IP1LQ8NDC0 245 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms