RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 KRTAP29-1A8MX34 341 aaPredicted RBP13.36□□□□□ -0.27
PHF1-208ENST00000486845 DIRC3C9JPN6 131 aa13.36□□□□□ -0.27
PHF1-208ENST00000486845 UBE2L3P68036 154 aaKnown RBP13.36□□□□□ -0.27
PHF1-208ENST00000486845 FBLL1A6NHQ2 334 aaKnown RBP13.34□□□□□ -0.27
PHF1-208ENST00000486845 C17orf112F2Z3M2 114 aa13.34□□□□□ -0.27
PHF1-208ENST00000486845 GNRH2O43555 120 aa13.34□□□□□ -0.27
PHF1-208ENST00000486845 LAGE3Q14657 143 aa13.34□□□□□ -0.27
PHF1-208ENST00000486845 LINC00528Q8N1L1 170 aa13.34□□□□□ -0.27
PHF1-208ENST00000486845 ATP5SQ99766 215 aa13.34□□□□□ -0.27
PHF1-208ENST00000486845 TM2D2Q9BX73 214 aa13.34□□□□□ -0.27
PHF1-208ENST00000486845 WDR61Q9GZS3 305 aaKnown RBP13.34□□□□□ -0.27
PHF1-208ENST00000486845 TRAV21A0A0B4J279 112 aa13.33□□□□□ -0.28
PHF1-208ENST00000486845 IGHV3-30P01768 117 aa13.33□□□□□ -0.28
PHF1-208ENST00000486845 IGHV3-33P01772 117 aa13.33□□□□□ -0.28
PHF1-208ENST00000486845 H2AFB2P0C5Z0 115 aa13.33□□□□□ -0.28
PHF1-208ENST00000486845 IGHV3-30-3P0DP02 117 aa13.33□□□□□ -0.28
PHF1-208ENST00000486845 IGHV3-30-5P0DP03 117 aa13.33□□□□□ -0.28
PHF1-208ENST00000486845 Q6ZSA8 131 aa13.33□□□□□ -0.28
PHF1-208ENST00000486845 DEFB104AQ8WTQ1 72 aa13.33□□□□□ -0.28
PHF1-208ENST00000486845 PRADC1Q9BSG0 188 aa13.33□□□□□ -0.28
PHF1-208ENST00000486845 SDF2L1Q9HCN8 221 aa13.33□□□□□ -0.28
PHF1-208ENST00000486845 TYMSP04818 313 aa13.32□□□□□ -0.28
PHF1-208ENST00000486845 KHDC3LQ587J8 217 aa13.32□□□□□ -0.28
PHF1-208ENST00000486845 LELP1Q5T871 98 aa13.32□□□□□ -0.28
PHF1-208ENST00000486845 LINC00299Q6ZSB3 139 aa13.32□□□□□ -0.28
PHF1-208ENST00000486845 SLC25A29Q8N8R3 303 aa13.32□□□□□ -0.28
PHF1-208ENST00000486845 KCNS1Q96KK3 526 aa13.32□□□□□ -0.28
PHF1-208ENST00000486845 HYLS1Q96M11 299 aa13.32□□□□□ -0.28
PHF1-208ENST00000486845 CIDEAO60543 219 aa13.31□□□□□ -0.28
PHF1-208ENST00000486845 RHOHQ15669 191 aa13.31□□□□□ -0.28
PHF1-208ENST00000486845 CMTM2Q8TAZ6 248 aa13.31□□□□□ -0.28
PHF1-208ENST00000486845 OTORQ9NRC9 128 aa13.31□□□□□ -0.28
PHF1-208ENST00000486845 TRBV6-4A0A1B0GX49 114 aa13.3□□□□□ -0.28
PHF1-208ENST00000486845 TAS2R45P59539 299 aa13.3□□□□□ -0.28
PHF1-208ENST00000486845 FAM74A1Q5RGS3 127 aa13.3□□□□□ -0.28
PHF1-208ENST00000486845 RPH3ALQ9UNE2 315 aa13.3□□□□□ -0.28
PHF1-208ENST00000486845 F6UZH7 168 aa13.29□□□□□ -0.28
PHF1-208ENST00000486845 ZNF876PQ49A33 203 aa13.29□□□□□ -0.28
PHF1-208ENST00000486845 ASB13Q8WXK3 278 aa13.29□□□□□ -0.28
PHF1-208ENST00000486845 GTSF1LQ9H1H1 148 aa13.29□□□□□ -0.28
PHF1-208ENST00000486845 PGPA6NDG6 321 aa13.28□□□□□ -0.28
PHF1-208ENST00000486845 RS1O15537 224 aa13.28□□□□□ -0.28
PHF1-208ENST00000486845 WFDC2Q14508 124 aa13.28□□□□□ -0.28
PHF1-208ENST00000486845 FFAR4Q5NUL3 377 aa13.28□□□□□ -0.28
PHF1-208ENST00000486845 CFAP126Q5VTH2 177 aa13.28□□□□□ -0.28
PHF1-208ENST00000486845 GOLT1AQ6ZVE7 132 aa13.28□□□□□ -0.28
PHF1-208ENST00000486845 ARL6IP6Q8N6S5 226 aa13.28□□□□□ -0.28
PHF1-208ENST00000486845 S100ZQ8WXG8 99 aa13.28□□□□□ -0.28
PHF1-208ENST00000486845 TREM1Q9NP99 234 aa13.28□□□□□ -0.28
PHF1-208ENST00000486845 OR5AC2Q9NZP5 309 aa13.28□□□□□ -0.28
PHF1-208ENST00000486845 SERTAD4-AS1Q5TG53 156 aa13.27□□□□□ -0.29
PHF1-208ENST00000486845 ATP6V0E2Q8NHE4 81 aa13.27□□□□□ -0.29
PHF1-208ENST00000486845 NMES1Q9C002 83 aa13.27□□□□□ -0.29
PHF1-208ENST00000486845 TRAV8-3A0A0A6YYJ7 113 aa13.26□□□□□ -0.29
PHF1-208ENST00000486845 FAM240BA0A1B0GVZ2 78 aa13.26□□□□□ -0.29
PHF1-208ENST00000486845 LRRC37A5PQ49AS3 106 aa13.26□□□□□ -0.29
PHF1-208ENST00000486845 SYT8Q8NBV8 401 aa13.26□□□□□ -0.29
PHF1-208ENST00000486845 TVP23CQ96ET8 276 aa13.26□□□□□ -0.29
PHF1-208ENST00000486845 SH3BGRL3Q9H299 93 aa13.26□□□□□ -0.29
PHF1-208ENST00000486845 MBD2Q9UBB5 411 aa13.25□□□□□ -0.29
PHF1-208ENST00000486845 HMCN2Q8NDA2 5059 aa13.25□□□□□ -0.29
PHF1-208ENST00000486845 TRAV8-1A0A0A6YYK1 113 aa13.24□□□□□ -0.29
PHF1-208ENST00000486845 IGHV3-73A0A0B4J1V6 119 aa13.24□□□□□ -0.29
PHF1-208ENST00000486845 H0YIZ8 118 aa13.24□□□□□ -0.29
PHF1-208ENST00000486845 LECT2O14960 151 aa13.24□□□□□ -0.29
PHF1-208ENST00000486845 SIX6O95475 246 aa13.24□□□□□ -0.29
PHF1-208ENST00000486845 MGST1P10620 155 aaKnown RBP13.24□□□□□ -0.29
PHF1-208ENST00000486845 TOR2AQ5JU69 321 aa13.24□□□□□ -0.29
PHF1-208ENST00000486845 DPPA3Q6W0C5 159 aa13.24□□□□□ -0.29
PHF1-208ENST00000486845 NDFIP1Q9BT67 221 aa13.24□□□□□ -0.29
PHF1-208ENST00000486845 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.23□□□□□ -0.29
PHF1-208ENST00000486845 CCDC32Q9BV29 185 aa13.23□□□□□ -0.29
PHF1-208ENST00000486845 CYCSP99999 105 aaKnown RBP13.22□□□□□ -0.29
PHF1-208ENST00000486845 MZT2BQ6NZ67 158 aa13.22□□□□□ -0.29
PHF1-208ENST00000486845 PQLC2Q6ZP29 291 aa13.22□□□□□ -0.29
PHF1-208ENST00000486845 SCXQ7RTU7 201 aa13.22□□□□□ -0.29
PHF1-208ENST00000486845 Q8N3U1 123 aa13.22□□□□□ -0.29
PHF1-208ENST00000486845 SCGB1C1Q8TD33 95 aa13.22□□□□□ -0.29
PHF1-208ENST00000486845 PTH2Q96A98 100 aa13.22□□□□□ -0.29
PHF1-208ENST00000486845 COX11Q9Y6N1 276 aa13.22□□□□□ -0.29
PHF1-208ENST00000486845 EIF3GO75821 320 aaKnown RBP eCLIP13.21□□□□□ -0.29
PHF1-208ENST00000486845 ASAH1Q13510 395 aa13.21□□□□□ -0.29
PHF1-208ENST00000486845 ZNF506Q5JVG8 444 aa13.21□□□□□ -0.29
PHF1-208ENST00000486845 C9orf85Q96MD7 179 aa13.21□□□□□ -0.29
PHF1-208ENST00000486845 GGTLC3B5MD39 225 aa13.2□□□□□ -0.3
PHF1-208ENST00000486845 TAAR5O14804 337 aa13.2□□□□□ -0.3
PHF1-208ENST00000486845 GNG5P63218 68 aa13.2□□□□□ -0.3
PHF1-208ENST00000486845 DAZ4Q86SG3 579 aaKnown RBP13.2□□□□□ -0.3
PHF1-208ENST00000486845 DAZ3Q9NR90 486 aaKnown RBP13.2□□□□□ -0.3
PHF1-208ENST00000486845 C11orf21Q9P2W6 132 aa13.2□□□□□ -0.3
PHF1-208ENST00000486845 HSPB11Q9Y547 144 aa13.2□□□□□ -0.3
PHF1-208ENST00000486845 SERTM2A0A1B0GWG4 89 aa13.19□□□□□ -0.3
PHF1-208ENST00000486845 A0A1W2PPV4 95 aa13.19□□□□□ -0.3
PHF1-208ENST00000486845 PGPEP1LA6NFU8 196 aa13.19□□□□□ -0.3
PHF1-208ENST00000486845 ACOT6Q3I5F7 207 aaPredicted RBP13.19□□□□□ -0.3
PHF1-208ENST00000486845 BAALCQ8WXS3 180 aa13.19□□□□□ -0.3
PHF1-208ENST00000486845 RMI2Q96E14 147 aa13.19□□□□□ -0.3
PHF1-208ENST00000486845 LRP1Q07954 4544 aaKnown RBP13.18□□□□□ -0.3
PHF1-208ENST00000486845 RBFOX3A6NFN3 312 aa13.18□□□□□ -0.3
PHF1-208ENST00000486845 OXTP01178 125 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms