RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 VSIG2Q96IQ7 327 aa11.09□□□□□ -0.63
HDAC8-218ENST00000486704 C8orf49Q96NF6 230 aa11.09□□□□□ -0.63
HDAC8-218ENST00000486704 TCEAL7Q9BRU2 100 aa11.09□□□□□ -0.63
HDAC8-218ENST00000486704 SDF2L1Q9HCN8 221 aa11.09□□□□□ -0.63
HDAC8-218ENST00000486704 LINC00588Q9Y4M8 146 aa11.09□□□□□ -0.63
HDAC8-218ENST00000486704 M0R2N4 97 aa11.08□□□□□ -0.64
HDAC8-218ENST00000486704 PEX7O00628 323 aa11.08□□□□□ -0.64
HDAC8-218ENST00000486704 IFNA7P01567 189 aa11.08□□□□□ -0.64
HDAC8-218ENST00000486704 TYMSP04818 313 aa11.08□□□□□ -0.64
HDAC8-218ENST00000486704 PFN1P07737 140 aaKnown RBP11.08□□□□□ -0.64
HDAC8-218ENST00000486704 ZNF80P51504 273 aaPredicted RBP11.08□□□□□ -0.64
HDAC8-218ENST00000486704 EIF5AP63241 154 aaKnown RBP11.08□□□□□ -0.64
HDAC8-218ENST00000486704 SMUG1Q53HV7 270 aa11.08□□□□□ -0.64
HDAC8-218ENST00000486704 PRNTQ86SH4 94 aa11.08□□□□□ -0.64
HDAC8-218ENST00000486704 STOML3Q8TAV4 291 aa11.08□□□□□ -0.64
HDAC8-218ENST00000486704 HIST1H2BAQ96A08 127 aa11.08□□□□□ -0.64
HDAC8-218ENST00000486704 ZNF471Q9BX82 626 aaPredicted RBP11.08□□□□□ -0.64
HDAC8-218ENST00000486704 GCGP01275 180 aa11.07□□□□□ -0.64
HDAC8-218ENST00000486704 FHITP49789 147 aa11.07□□□□□ -0.64
HDAC8-218ENST00000486704 PPT1P50897 306 aa11.07□□□□□ -0.64
HDAC8-218ENST00000486704 SLAQ13239 276 aa11.07□□□□□ -0.64
HDAC8-218ENST00000486704 DPPA3Q6W0C5 159 aa11.07□□□□□ -0.64
HDAC8-218ENST00000486704 PRO0255Q9UI72 69 aa11.07□□□□□ -0.64
HDAC8-218ENST00000486704 DNAH2Q9P225 4427 aa11.07□□□□□ -0.64
HDAC8-218ENST00000486704 A0A096LPF7 62 aa11.06□□□□□ -0.64
HDAC8-218ENST00000486704 M0R2P5 195 aa11.06□□□□□ -0.64
HDAC8-218ENST00000486704 RTL8CO15255 209 aa11.06□□□□□ -0.64
HDAC8-218ENST00000486704 GNRH2O43555 120 aa11.06□□□□□ -0.64
HDAC8-218ENST00000486704 TMUB2Q71RG4 321 aa11.06□□□□□ -0.64
HDAC8-218ENST00000486704 Q86TA4 180 aa11.06□□□□□ -0.64
HDAC8-218ENST00000486704 TCTE3Q8IZS6 198 aa11.06□□□□□ -0.64
HDAC8-218ENST00000486704 MBD3L1Q8WWY6 194 aa11.06□□□□□ -0.64
HDAC8-218ENST00000486704 UPK3BQ9BT76 320 aa11.06□□□□□ -0.64
HDAC8-218ENST00000486704 C11orf21Q9P2W6 132 aa11.06□□□□□ -0.64
HDAC8-218ENST00000486704 DNAH17Q9UFH2 4485 aa11.05□□□□□ -0.64
HDAC8-218ENST00000486704 PAX4O43316 350 aa11.05□□□□□ -0.64
HDAC8-218ENST00000486704 PFDN1O60925 122 aa11.05□□□□□ -0.64
HDAC8-218ENST00000486704 IGHV3-53P01767 116 aa11.05□□□□□ -0.64
HDAC8-218ENST00000486704 TPT1P13693 172 aaKnown RBP11.05□□□□□ -0.64
HDAC8-218ENST00000486704 CRYBA4P53673 196 aa11.05□□□□□ -0.64
HDAC8-218ENST00000486704 FHL2Q14192 279 aa11.05□□□□□ -0.64
HDAC8-218ENST00000486704 LINC00479Q96M42 142 aa11.05□□□□□ -0.64
HDAC8-218ENST00000486704 MRPS16Q9Y3D3 137 aaKnown RBP11.05□□□□□ -0.64
HDAC8-218ENST00000486704 FAT2Q9NYQ8 4349 aa11.04□□□□□ -0.64
HDAC8-218ENST00000486704 TRAV4A0A0B4J268 109 aa11.04□□□□□ -0.64
HDAC8-218ENST00000486704 TRAV34A0A0B4J273 112 aa11.04□□□□□ -0.64
HDAC8-218ENST00000486704 NBDYA0A0U1RRE5 68 aa11.04□□□□□ -0.64
HDAC8-218ENST00000486704 ESRGQ1W209 222 aa11.04□□□□□ -0.64
HDAC8-218ENST00000486704 Q6ZNX1 250 aa11.04□□□□□ -0.64
HDAC8-218ENST00000486704 FAM213BQ8TBF2 198 aa11.04□□□□□ -0.64
HDAC8-218ENST00000486704 ICOSQ9Y6W8 199 aa11.04□□□□□ -0.64
HDAC8-218ENST00000486704 TRBV6-1A0A0K0K1D8 114 aa11.03□□□□□ -0.64
HDAC8-218ENST00000486704 SOHLH1Q5JUK2 328 aa11.03□□□□□ -0.64
HDAC8-218ENST00000486704 COX8CQ7Z4L0 72 aa11.03□□□□□ -0.64
HDAC8-218ENST00000486704 FMC1Q96HJ9 113 aa11.03□□□□□ -0.64
HDAC8-218ENST00000486704 ZNF479Q96JC4 524 aa11.03□□□□□ -0.64
HDAC8-218ENST00000486704 C9orf85Q96MD7 179 aa11.03□□□□□ -0.64
HDAC8-218ENST00000486704 HHLA3Q9XRX5 114 aa11.03□□□□□ -0.64
HDAC8-218ENST00000486704 ZFP30Q9Y2G7 519 aa11.03□□□□□ -0.64
HDAC8-218ENST00000486704 TRGV4A0A0C4DH28 118 aa11.02□□□□□ -0.65
HDAC8-218ENST00000486704 SFTA3P0C7M3 94 aa11.02□□□□□ -0.65
HDAC8-218ENST00000486704 LGALSLQ3ZCW2 172 aaPredicted RBP11.02□□□□□ -0.65
HDAC8-218ENST00000486704 C1orf134Q5TEV5 83 aa11.02□□□□□ -0.65
HDAC8-218ENST00000486704 SFT2D1Q8WV19 159 aa11.02□□□□□ -0.65
HDAC8-218ENST00000486704 PTH2Q96A98 100 aa11.02□□□□□ -0.65
HDAC8-218ENST00000486704 A0A1B0GVY2 172 aa11.01□□□□□ -0.65
HDAC8-218ENST00000486704 PRSS29PA6NIE9 313 aa11.01□□□□□ -0.65
HDAC8-218ENST00000486704 FABP5P3A8MUU1 101 aa11.01□□□□□ -0.65
HDAC8-218ENST00000486704 MRPL23Q16540 153 aaKnown RBP11.01□□□□□ -0.65
HDAC8-218ENST00000486704 TTC32Q5I0X7 151 aa11.01□□□□□ -0.65
HDAC8-218ENST00000486704 CST9LP1Q5W188 147 aa11.01□□□□□ -0.65
HDAC8-218ENST00000486704 Q9H8V8 135 aa11.01□□□□□ -0.65
HDAC8-218ENST00000486704 PAGE4O60829 102 aa11□□□□□ -0.65
HDAC8-218ENST00000486704 C1QBP02746 253 aa11□□□□□ -0.65
HDAC8-218ENST00000486704 ORM1P02763 201 aa11□□□□□ -0.65
HDAC8-218ENST00000486704 H2AFB1P0C5Y9 115 aa11□□□□□ -0.65
HDAC8-218ENST00000486704 RNASE3P12724 160 aaKnown RBP11□□□□□ -0.65
HDAC8-218ENST00000486704 UBE2G1P62253 170 aa11□□□□□ -0.65
HDAC8-218ENST00000486704 OR4C5Q8NGB2 326 aa11□□□□□ -0.65
HDAC8-218ENST00000486704 ZC2HC1AQ96GY0 325 aa11□□□□□ -0.65
HDAC8-218ENST00000486704 IGKV3D-20A0A0C4DH25 116 aa10.99□□□□□ -0.65
HDAC8-218ENST00000486704 A0A1W2PPQ1 181 aa10.99□□□□□ -0.65
HDAC8-218ENST00000486704 CIDEAO60543 219 aa10.99□□□□□ -0.65
HDAC8-218ENST00000486704 LTAP01374 205 aa10.99□□□□□ -0.65
HDAC8-218ENST00000486704 AKR1C3P42330 323 aa10.99□□□□□ -0.65
HDAC8-218ENST00000486704 RAB5CP51148 216 aa10.99□□□□□ -0.65
HDAC8-218ENST00000486704 ZNF876PQ49A33 203 aa10.99□□□□□ -0.65
HDAC8-218ENST00000486704 EIF5AL1Q6IS14 154 aaKnown RBP10.99□□□□□ -0.65
HDAC8-218ENST00000486704 TRAV1-1A0A0B4J248 108 aa10.98□□□□□ -0.65
HDAC8-218ENST00000486704 C9JCJ5 164 aa10.98□□□□□ -0.65
HDAC8-218ENST00000486704 PIK3CD-AS1Q5SR53 167 aa10.98□□□□□ -0.65
HDAC8-218ENST00000486704 DNLZQ5SXM8 178 aa10.98□□□□□ -0.65
HDAC8-218ENST00000486704 NEGR1Q7Z3B1 354 aa10.98□□□□□ -0.65
HDAC8-218ENST00000486704 C6orf223Q8N319 242 aa10.98□□□□□ -0.65
HDAC8-218ENST00000486704 PCNPQ8WW12 178 aaKnown RBP10.98□□□□□ -0.65
HDAC8-218ENST00000486704 A0A1B0GV50 99 aa10.97□□□□□ -0.65
HDAC8-218ENST00000486704 K7EQD1 137 aa10.97□□□□□ -0.65
HDAC8-218ENST00000486704 RS1O15537 224 aa10.97□□□□□ -0.65
HDAC8-218ENST00000486704 S100A9P06702 114 aaKnown RBP10.97□□□□□ -0.65
HDAC8-218ENST00000486704 GATA1P15976 413 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms