RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 KCNS1Q96KK3 526 aa12.7□□□□□ -0.38
CLDN11-206ENST00000486429 MAP1LC3BQ9GZQ8 125 aa12.7□□□□□ -0.38
CLDN11-206ENST00000486429 PRO0255Q9UI72 69 aa12.7□□□□□ -0.38
CLDN11-206ENST00000486429 A0A096LPF7 62 aa12.69□□□□□ -0.38
CLDN11-206ENST00000486429 IGHV3-16A0A0C4DH30 117 aa12.69□□□□□ -0.38
CLDN11-206ENST00000486429 PAX4O43316 350 aa12.69□□□□□ -0.38
CLDN11-206ENST00000486429 IGLV2-11P01706 119 aa12.69□□□□□ -0.38
CLDN11-206ENST00000486429 TYMSP04818 313 aa12.69□□□□□ -0.38
CLDN11-206ENST00000486429 SLAQ13239 276 aa12.69□□□□□ -0.38
CLDN11-206ENST00000486429 PRNTQ86SH4 94 aa12.69□□□□□ -0.38
CLDN11-206ENST00000486429 C8orf49Q96NF6 230 aa12.69□□□□□ -0.38
CLDN11-206ENST00000486429 MRPS16Q9Y3D3 137 aaKnown RBP12.69□□□□□ -0.38
CLDN11-206ENST00000486429 ICOSQ9Y6W8 199 aa12.69□□□□□ -0.38
CLDN11-206ENST00000486429 GNRH2O43555 120 aa12.68□□□□□ -0.38
CLDN11-206ENST00000486429 GCGP01275 180 aa12.68□□□□□ -0.38
CLDN11-206ENST00000486429 IFNA7P01567 189 aa12.68□□□□□ -0.38
CLDN11-206ENST00000486429 ESRGQ1W209 222 aa12.68□□□□□ -0.38
CLDN11-206ENST00000486429 SMUG1Q53HV7 270 aa12.68□□□□□ -0.38
CLDN11-206ENST00000486429 RASL10AQ92737 203 aa12.68□□□□□ -0.38
CLDN11-206ENST00000486429 UPK3BQ9BT76 320 aa12.68□□□□□ -0.38
CLDN11-206ENST00000486429 TRGV4A0A0C4DH28 118 aa12.67□□□□□ -0.38
CLDN11-206ENST00000486429 A0A1B0GVY2 172 aa12.67□□□□□ -0.38
CLDN11-206ENST00000486429 HMSDA8MTL9 139 aa12.67□□□□□ -0.38
CLDN11-206ENST00000486429 M0R2P5 195 aa12.67□□□□□ -0.38
CLDN11-206ENST00000486429 PPT1P50897 306 aa12.67□□□□□ -0.38
CLDN11-206ENST00000486429 ZNF80P51504 273 aaPredicted RBP12.67□□□□□ -0.38
CLDN11-206ENST00000486429 CRYBA4P53673 196 aa12.67□□□□□ -0.38
CLDN11-206ENST00000486429 FHL2Q14192 279 aa12.67□□□□□ -0.38
CLDN11-206ENST00000486429 SAPCD1Q5SSQ6 148 aa12.67□□□□□ -0.38
CLDN11-206ENST00000486429 NKX6-2Q9C056 277 aaPredicted RBP12.67□□□□□ -0.38
CLDN11-206ENST00000486429 HHLA3Q9XRX5 114 aa12.67□□□□□ -0.38
CLDN11-206ENST00000486429 KANTRA0A1W2PQU2 76 aa12.66□□□□□ -0.38
CLDN11-206ENST00000486429 FAM74A7A6NL05 159 aa12.66□□□□□ -0.38
CLDN11-206ENST00000486429 PEX7O00628 323 aa12.66□□□□□ -0.38
CLDN11-206ENST00000486429 PFN1P07737 140 aaKnown RBP12.66□□□□□ -0.38
CLDN11-206ENST00000486429 SFTA3P0C7M3 94 aa12.66□□□□□ -0.38
CLDN11-206ENST00000486429 TTC32Q5I0X7 151 aa12.66□□□□□ -0.38
CLDN11-206ENST00000486429 OR11H4Q8NGC9 324 aa12.66□□□□□ -0.38
CLDN11-206ENST00000486429 STOML3Q8TAV4 291 aa12.66□□□□□ -0.38
CLDN11-206ENST00000486429 ZNF479Q96JC4 524 aa12.66□□□□□ -0.38
CLDN11-206ENST00000486429 Q9H8V8 135 aa12.66□□□□□ -0.38
CLDN11-206ENST00000486429 TRAV4A0A0B4J268 109 aa12.65□□□□□ -0.38
CLDN11-206ENST00000486429 A0A0D9SG52 128 aa12.65□□□□□ -0.38
CLDN11-206ENST00000486429 BCL2L11O43521 198 aa12.65□□□□□ -0.38
CLDN11-206ENST00000486429 Q86TA4 180 aa12.65□□□□□ -0.38
CLDN11-206ENST00000486429 C6orf223Q8N319 242 aa12.65□□□□□ -0.38
CLDN11-206ENST00000486429 ZNF471Q9BX82 626 aaPredicted RBP12.65□□□□□ -0.38
CLDN11-206ENST00000486429 C11orf21Q9P2W6 132 aa12.65□□□□□ -0.38
CLDN11-206ENST00000486429 TRAV34A0A0B4J273 112 aa12.64□□□□□ -0.39
CLDN11-206ENST00000486429 HIST1H2BAQ96A08 127 aa12.64□□□□□ -0.39
CLDN11-206ENST00000486429 LINC00479Q96M42 142 aa12.64□□□□□ -0.39
CLDN11-206ENST00000486429 ARL2-SNX15V9GYD0 113 aa12.64□□□□□ -0.39
CLDN11-206ENST00000486429 SEC11BP0C7V7 166 aa12.63□□□□□ -0.39
CLDN11-206ENST00000486429 FHITP49789 147 aa12.63□□□□□ -0.39
CLDN11-206ENST00000486429 MRPL23Q16540 153 aaKnown RBP12.63□□□□□ -0.39
CLDN11-206ENST00000486429 OR4C5Q8NGB2 326 aa12.63□□□□□ -0.39
CLDN11-206ENST00000486429 PCNPQ8WW12 178 aaKnown RBP12.63□□□□□ -0.39
CLDN11-206ENST00000486429 UMAD1C9J7I0 102 aa12.62□□□□□ -0.39
CLDN11-206ENST00000486429 PFDN1O60925 122 aa12.62□□□□□ -0.39
CLDN11-206ENST00000486429 EIF5AP63241 154 aaKnown RBP12.62□□□□□ -0.39
CLDN11-206ENST00000486429 FAM213BQ8TBF2 198 aa12.62□□□□□ -0.39
CLDN11-206ENST00000486429 TCEAL7Q9BRU2 100 aa12.62□□□□□ -0.39
CLDN11-206ENST00000486429 C9JCJ5 164 aa12.61□□□□□ -0.39
CLDN11-206ENST00000486429 SRIP30626 198 aa12.61□□□□□ -0.39
CLDN11-206ENST00000486429 KRTAP1-5Q9BYS1 174 aa12.61□□□□□ -0.39
CLDN11-206ENST00000486429 PKHD1P08F94 4074 aa12.61□□□□□ -0.39
CLDN11-206ENST00000486429 A0A1W2PPQ1 181 aa12.6□□□□□ -0.39
CLDN11-206ENST00000486429 ORM1P02763 201 aa12.6□□□□□ -0.39
CLDN11-206ENST00000486429 GYPEP15421 78 aa12.6□□□□□ -0.39
CLDN11-206ENST00000486429 UBE2G1P62253 170 aa12.6□□□□□ -0.39
CLDN11-206ENST00000486429 ZNF876PQ49A33 203 aa12.6□□□□□ -0.39
CLDN11-206ENST00000486429 CST9LP1Q5W188 147 aa12.6□□□□□ -0.39
CLDN11-206ENST00000486429 NEGR1Q7Z3B1 354 aa12.6□□□□□ -0.39
CLDN11-206ENST00000486429 C9orf85Q96MD7 179 aa12.6□□□□□ -0.39
CLDN11-206ENST00000486429 PKD1P98161 4303 aa12.59□□□□□ -0.39
CLDN11-206ENST00000486429 NXPH4O95158 308 aa12.59□□□□□ -0.39
CLDN11-206ENST00000486429 TPT1P13693 172 aaKnown RBP12.59□□□□□ -0.39
CLDN11-206ENST00000486429 DPPA3Q6W0C5 159 aa12.59□□□□□ -0.39
CLDN11-206ENST00000486429 SFT2D1Q8WV19 159 aa12.59□□□□□ -0.39
CLDN11-206ENST00000486429 FMC1Q96HJ9 113 aa12.59□□□□□ -0.39
CLDN11-206ENST00000486429 FABP5P3A8MUU1 101 aa12.58□□□□□ -0.4
CLDN11-206ENST00000486429 K7EQD1 137 aa12.58□□□□□ -0.4
CLDN11-206ENST00000486429 TMUB2Q71RG4 321 aa12.58□□□□□ -0.4
CLDN11-206ENST00000486429 MBD3L1Q8WWY6 194 aa12.58□□□□□ -0.4
CLDN11-206ENST00000486429 ZFP30Q9Y2G7 519 aa12.58□□□□□ -0.4
CLDN11-206ENST00000486429 A0A1B0GV50 99 aa12.57□□□□□ -0.4
CLDN11-206ENST00000486429 SIVA1O15304 175 aa12.57□□□□□ -0.4
CLDN11-206ENST00000486429 PAGE4O60829 102 aa12.57□□□□□ -0.4
CLDN11-206ENST00000486429 S100A4P26447 101 aaKnown RBP12.57□□□□□ -0.4
CLDN11-206ENST00000486429 AKR1C3P42330 323 aa12.57□□□□□ -0.4
CLDN11-206ENST00000486429 TNP2Q05952 138 aa12.57□□□□□ -0.4
CLDN11-206ENST00000486429 LYPD5Q6UWN5 251 aa12.57□□□□□ -0.4
CLDN11-206ENST00000486429 AKAP14Q86UN6 197 aa12.57□□□□□ -0.4
CLDN11-206ENST00000486429 TXNDC17Q9BRA2 123 aa12.57□□□□□ -0.4
CLDN11-206ENST00000486429 IGKV3D-20A0A0C4DH25 116 aa12.56□□□□□ -0.4
CLDN11-206ENST00000486429 TRBV6-1A0A0K0K1D8 114 aa12.56□□□□□ -0.4
CLDN11-206ENST00000486429 RS1O15537 224 aa12.56□□□□□ -0.4
CLDN11-206ENST00000486429 RNASE3P12724 160 aaKnown RBP12.56□□□□□ -0.4
CLDN11-206ENST00000486429 GATA1P15976 413 aaPredicted RBP12.56□□□□□ -0.4
CLDN11-206ENST00000486429 ASIPP42127 132 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms