RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 OR5A2Q8NGI9 324 aa0.14□□□□□ -2.39
LTN1-206ENST00000486427 SMIM7Q9BQ49 75 aa0.14□□□□□ -2.39
LTN1-206ENST00000486427 SELENOSQ9BQE4 189 aa0.14□□□□□ -2.39
LTN1-206ENST00000486427 DDA1Q9BW61 102 aa0.14□□□□□ -2.39
LTN1-206ENST00000486427 MRPL35Q9NZE8 188 aaKnown RBP0.14□□□□□ -2.39
LTN1-206ENST00000486427 ESPL1Q14674 2120 aa0.14□□□□□ -2.39
LTN1-206ENST00000486427 RBBP6Q7Z6E9 1792 aaKnown RBP0.14□□□□□ -2.39
LTN1-206ENST00000486427 BDP1A6H8Y1 2624 aa0.14□□□□□ -2.39
LTN1-206ENST00000486427 MAST4O15021 2626 aa0.13□□□□□ -2.39
LTN1-206ENST00000486427 IGHV1-24A0A0C4DH33 117 aa0.13□□□□□ -2.39
LTN1-206ENST00000486427 A0A0G2JMM0 328 aa0.13□□□□□ -2.39
LTN1-206ENST00000486427 HIGD1CA8MV81 97 aa0.13□□□□□ -2.39
LTN1-206ENST00000486427 H0YJX3 145 aa0.13□□□□□ -2.39
LTN1-206ENST00000486427 FXYD1O00168 92 aa0.13□□□□□ -2.39
LTN1-206ENST00000486427 UQCRQO14949 82 aa0.13□□□□□ -2.39
LTN1-206ENST00000486427 TPST1O60507 370 aa0.13□□□□□ -2.39
LTN1-206ENST00000486427 IGF2P01344 180 aa0.13□□□□□ -2.39
LTN1-206ENST00000486427 MT-ND4LP03901 98 aa0.13□□□□□ -2.39
LTN1-206ENST00000486427 SDC4P31431 198 aa0.13□□□□□ -2.39
LTN1-206ENST00000486427 CKS2P33552 79 aa0.13□□□□□ -2.39
LTN1-206ENST00000486427 ETV6P41212 452 aa0.13□□□□□ -2.39
LTN1-206ENST00000486427 RPL37P61927 97 aaKnown RBP0.13□□□□□ -2.39
LTN1-206ENST00000486427 RHOHQ15669 191 aa0.13□□□□□ -2.39
LTN1-206ENST00000486427 IDO2Q6ZQW0 420 aa0.13□□□□□ -2.39
LTN1-206ENST00000486427 C19orf12Q9NSK7 152 aa0.13□□□□□ -2.39
LTN1-206ENST00000486427 CPDO75976 1380 aa0.13□□□□□ -2.39
LTN1-206ENST00000486427 MED23Q9ULK4 1368 aa0.13□□□□□ -2.39
LTN1-206ENST00000486427 ZCCHC6Q5VYS8 1495 aaKnown RBP0.13□□□□□ -2.39
LTN1-206ENST00000486427 CDK12Q9NYV4 1490 aaPredicted RBP0.13□□□□□ -2.39
LTN1-206ENST00000486427 KDM5CP41229 1560 aa0.13□□□□□ -2.39
LTN1-206ENST00000486427 PLXNA2O75051 1894 aa0.13□□□□□ -2.39
LTN1-206ENST00000486427 OVOS2A0A0G2JMS6 1433 aa0.13□□□□□ -2.39
LTN1-206ENST00000486427 ABCA1O95477 2261 aa0.12□□□□□ -2.39
LTN1-206ENST00000486427 SYNE2Q8WXH0 6885 aaKnown RBP0.12□□□□□ -2.39
LTN1-206ENST00000486427 TANC1Q9C0D5 1861 aa0.12□□□□□ -2.39
LTN1-206ENST00000486427 CASZ1Q86V15 1759 aa0.12□□□□□ -2.39
LTN1-206ENST00000486427 J3KT08 172 aa0.12□□□□□ -2.39
LTN1-206ENST00000486427 TFF1P04155 84 aa0.12□□□□□ -2.39
LTN1-206ENST00000486427 NBEAP1P0C6P0 100 aa0.12□□□□□ -2.39
LTN1-206ENST00000486427 PCBD1P61457 104 aa0.12□□□□□ -2.39
LTN1-206ENST00000486427 B2MP61769 119 aa0.12□□□□□ -2.39
LTN1-206ENST00000486427 LSM3P62310 102 aaKnown RBP0.12□□□□□ -2.39
LTN1-206ENST00000486427 RPS28P62857 69 aaKnown RBP0.12□□□□□ -2.39
LTN1-206ENST00000486427 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.12□□□□□ -2.39
LTN1-206ENST00000486427 DMAC1Q96GE9 116 aa0.12□□□□□ -2.39
LTN1-206ENST00000486427 MRPL40Q9NQ50 206 aaKnown RBP0.12□□□□□ -2.39
LTN1-206ENST00000486427 MAP2P11137 1827 aaKnown RBP0.12□□□□□ -2.39
LTN1-206ENST00000486427 PTPRGP23470 1445 aa0.12□□□□□ -2.39
LTN1-206ENST00000486427 ARHGAP31Q2M1Z3 1444 aa0.12□□□□□ -2.39
LTN1-206ENST00000486427 TRAV36DV7A0A075B6V5 113 aa0.11□□□□□ -2.39
LTN1-206ENST00000486427 A0A1B0GW64 132 aa0.11□□□□□ -2.39
LTN1-206ENST00000486427 GNG14A0A1W2PPG7 69 aa0.11□□□□□ -2.39
LTN1-206ENST00000486427 TSTD3H0UI37 97 aa0.11□□□□□ -2.39
LTN1-206ENST00000486427 DPM2O94777 84 aa0.11□□□□□ -2.39
LTN1-206ENST00000486427 CD3DP04234 171 aa0.11□□□□□ -2.39
LTN1-206ENST00000486427 CCKP06307 115 aa0.11□□□□□ -2.39
LTN1-206ENST00000486427 ADCYAP1P18509 176 aa0.11□□□□□ -2.39
LTN1-206ENST00000486427 OR8B8Q15620 311 aa0.11□□□□□ -2.39
LTN1-206ENST00000486427 SPINK13Q1W4C9 94 aa0.11□□□□□ -2.39
LTN1-206ENST00000486427 HSD17B12Q53GQ0 312 aa0.11□□□□□ -2.39
LTN1-206ENST00000486427 TMEM244Q5VVB8 128 aa0.11□□□□□ -2.39
LTN1-206ENST00000486427 OR8I2Q8N0Y5 310 aa0.11□□□□□ -2.39
LTN1-206ENST00000486427 OR4S1Q8NGB4 309 aa0.11□□□□□ -2.39
LTN1-206ENST00000486427 ATG5Q9H1Y0 275 aa0.11□□□□□ -2.39
LTN1-206ENST00000486427 METTL1Q9UBP6 276 aaKnown RBP0.11□□□□□ -2.39
LTN1-206ENST00000486427 GINS2Q9Y248 185 aa0.11□□□□□ -2.39
LTN1-206ENST00000486427 KDM6BO15054 1643 aa0.11□□□□□ -2.39
LTN1-206ENST00000486427 ARAP1Q96P48 1450 aa0.1□□□□□ -2.39
LTN1-206ENST00000486427 PIEZO1Q92508 2521 aa0.1□□□□□ -2.39
LTN1-206ENST00000486427 ABCA4P78363 2273 aa0.1□□□□□ -2.39
LTN1-206ENST00000486427 TRAV17A0A0B4J275 112 aa0.1□□□□□ -2.39
LTN1-206ENST00000486427 TNFSF15O95150 251 aa0.1□□□□□ -2.39
LTN1-206ENST00000486427 PAEPP09466 180 aa0.1□□□□□ -2.39
LTN1-206ENST00000486427 POLR2JP52435 117 aaKnown RBP0.1□□□□□ -2.39
LTN1-206ENST00000486427 PSPHP78330 225 aa0.1□□□□□ -2.39
LTN1-206ENST00000486427 KLKP1Q107X0 134 aa0.1□□□□□ -2.39
LTN1-206ENST00000486427 UNQ5815/PRO19632Q6UWF5 114 aa0.1□□□□□ -2.39
LTN1-206ENST00000486427 TMEM91Q6ZNR0 172 aa0.1□□□□□ -2.39
LTN1-206ENST00000486427 SKA2Q8WVK7 121 aaPredicted RBP0.1□□□□□ -2.39
LTN1-206ENST00000486427 HSPB11Q9Y547 144 aa0.1□□□□□ -2.39
LTN1-206ENST00000486427 DNAJC15Q9Y5T4 150 aa0.1□□□□□ -2.39
LTN1-206ENST00000486427 KIF13AQ9H1H9 1805 aa0.1□□□□□ -2.39
LTN1-206ENST00000486427 MED13LQ71F56 2210 aa0.09□□□□□ -2.39
LTN1-206ENST00000486427 VIRMAQ69YN4 1812 aaKnown RBP0.09□□□□□ -2.39
LTN1-206ENST00000486427 TRBV10-1A0A0K0K1A3 114 aa0.09□□□□□ -2.4
LTN1-206ENST00000486427 CXorf51AA0A1B0GTR3 108 aa0.09□□□□□ -2.4
LTN1-206ENST00000486427 PNMA8CA0A1B0GUJ8 204 aa0.09□□□□□ -2.4
LTN1-206ENST00000486427 A0A1B0GX51 115 aa0.09□□□□□ -2.4
LTN1-206ENST00000486427 C9JAW5 83 aa0.09□□□□□ -2.4
LTN1-206ENST00000486427 DEGS1O15121 323 aa0.09□□□□□ -2.4
LTN1-206ENST00000486427 MPC1LP0DKB6 136 aa0.09□□□□□ -2.4
LTN1-206ENST00000486427 HIST1H1BP16401 226 aaKnown RBP0.09□□□□□ -2.4
LTN1-206ENST00000486427 CMPK1P30085 196 aa0.09□□□□□ -2.4
LTN1-206ENST00000486427 SLC25A26Q70HW3 274 aa0.09□□□□□ -2.4
LTN1-206ENST00000486427 TAC4Q86UU9 113 aa0.09□□□□□ -2.4
LTN1-206ENST00000486427 SLC35B3Q9H1N7 401 aa0.09□□□□□ -2.4
LTN1-206ENST00000486427 BANF2Q9H503 90 aa0.09□□□□□ -2.4
LTN1-206ENST00000486427 TMEM14BQ9NUH8 114 aa0.09□□□□□ -2.4
LTN1-206ENST00000486427 CALML5Q9NZT1 146 aa0.09□□□□□ -2.4
LTN1-206ENST00000486427 HIGD1AQ9Y241 93 aa0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms