RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 FBLL1A6NHQ2 334 aaKnown RBP8.96□□□□□ -0.98
CHMP3-208ENST00000486404 RTL8CO15255 209 aa8.96□□□□□ -0.98
CHMP3-208ENST00000486404 PPT1P50897 306 aa8.96□□□□□ -0.98
CHMP3-208ENST00000486404 FGF8P55075 233 aaPredicted RBP8.96□□□□□ -0.98
CHMP3-208ENST00000486404 SLAQ13239 276 aa8.96□□□□□ -0.98
CHMP3-208ENST00000486404 ZNF345Q14585 488 aa8.96□□□□□ -0.98
CHMP3-208ENST00000486404 TDRG1Q3Y452 100 aa8.96□□□□□ -0.98
CHMP3-208ENST00000486404 TTC32Q5I0X7 151 aa8.96□□□□□ -0.98
CHMP3-208ENST00000486404 TMEM75Q8N9X5 138 aa8.96□□□□□ -0.98
CHMP3-208ENST00000486404 PCNPQ8WW12 178 aaKnown RBP8.96□□□□□ -0.98
CHMP3-208ENST00000486404 MAP1LC3BQ9GZQ8 125 aa8.96□□□□□ -0.98
CHMP3-208ENST00000486404 PRO0255Q9UI72 69 aa8.96□□□□□ -0.98
CHMP3-208ENST00000486404 EPDR1Q9UM22 224 aa8.96□□□□□ -0.98
CHMP3-208ENST00000486404 HECTD4Q9Y4D8 3996 aa8.96□□□□□ -0.98
CHMP3-208ENST00000486404 GCGP01275 180 aa8.95□□□□□ -0.98
CHMP3-208ENST00000486404 TYMSP04818 313 aa8.95□□□□□ -0.98
CHMP3-208ENST00000486404 ZNF726P1Q15940 193 aa8.95□□□□□ -0.98
CHMP3-208ENST00000486404 SMUG1Q53HV7 270 aa8.95□□□□□ -0.98
CHMP3-208ENST00000486404 STOML3Q8TAV4 291 aa8.95□□□□□ -0.98
CHMP3-208ENST00000486404 TVP23CQ96ET8 276 aa8.95□□□□□ -0.98
CHMP3-208ENST00000486404 VSIG2Q96IQ7 327 aa8.95□□□□□ -0.98
CHMP3-208ENST00000486404 C8orf49Q96NF6 230 aa8.95□□□□□ -0.98
CHMP3-208ENST00000486404 MRPS16Q9Y3D3 137 aaKnown RBP8.95□□□□□ -0.98
CHMP3-208ENST00000486404 A0A096LPF7 62 aa8.94□□□□□ -0.98
CHMP3-208ENST00000486404 IGHV3-16A0A0C4DH30 117 aa8.94□□□□□ -0.98
CHMP3-208ENST00000486404 KANTRA0A1W2PQU2 76 aa8.94□□□□□ -0.98
CHMP3-208ENST00000486404 M0R2P5 195 aa8.94□□□□□ -0.98
CHMP3-208ENST00000486404 PEX7O00628 323 aa8.94□□□□□ -0.98
CHMP3-208ENST00000486404 SAPCD1Q5SSQ6 148 aa8.94□□□□□ -0.98
CHMP3-208ENST00000486404 KCNRGQ8N5I3 272 aa8.94□□□□□ -0.98
CHMP3-208ENST00000486404 NKX6-2Q9C056 277 aaPredicted RBP8.94□□□□□ -0.98
CHMP3-208ENST00000486404 CYTL1Q9NRR1 136 aa8.94□□□□□ -0.98
CHMP3-208ENST00000486404 TRAV4A0A0B4J268 109 aa8.93□□□□□ -0.98
CHMP3-208ENST00000486404 BCL2L11O43521 198 aa8.93□□□□□ -0.98
CHMP3-208ENST00000486404 GNRH2O43555 120 aa8.93□□□□□ -0.98
CHMP3-208ENST00000486404 PFDN1O60925 122 aa8.93□□□□□ -0.98
CHMP3-208ENST00000486404 PFN1P07737 140 aaKnown RBP8.93□□□□□ -0.98
CHMP3-208ENST00000486404 SFTA3P0C7M3 94 aa8.93□□□□□ -0.98
CHMP3-208ENST00000486404 ESRGQ1W209 222 aa8.93□□□□□ -0.98
CHMP3-208ENST00000486404 Q86TA4 180 aa8.93□□□□□ -0.98
CHMP3-208ENST00000486404 C6orf223Q8N319 242 aa8.93□□□□□ -0.98
CHMP3-208ENST00000486404 OR4C5Q8NGB2 326 aa8.93□□□□□ -0.98
CHMP3-208ENST00000486404 RASL10AQ92737 203 aa8.93□□□□□ -0.98
CHMP3-208ENST00000486404 UPK3BQ9BT76 320 aa8.93□□□□□ -0.98
CHMP3-208ENST00000486404 ZNF471Q9BX82 626 aaPredicted RBP8.93□□□□□ -0.98
CHMP3-208ENST00000486404 Q9H8V8 135 aa8.93□□□□□ -0.98
CHMP3-208ENST00000486404 HHLA3Q9XRX5 114 aa8.93□□□□□ -0.98
CHMP3-208ENST00000486404 A0A0D9SG52 128 aa8.92□□□□□ -0.98
CHMP3-208ENST00000486404 FAM74A7A6NL05 159 aa8.92□□□□□ -0.98
CHMP3-208ENST00000486404 IGLV2-11P01706 119 aa8.92□□□□□ -0.98
CHMP3-208ENST00000486404 SRIP30626 198 aa8.92□□□□□ -0.98
CHMP3-208ENST00000486404 CRYBA4P53673 196 aa8.92□□□□□ -0.98
CHMP3-208ENST00000486404 UBE2G1P62253 170 aa8.92□□□□□ -0.98
CHMP3-208ENST00000486404 EIF5AP63241 154 aaKnown RBP8.92□□□□□ -0.98
CHMP3-208ENST00000486404 FHL2Q14192 279 aa8.92□□□□□ -0.98
CHMP3-208ENST00000486404 FAM213BQ8TBF2 198 aa8.92□□□□□ -0.98
CHMP3-208ENST00000486404 ZNF479Q96JC4 524 aa8.92□□□□□ -0.98
CHMP3-208ENST00000486404 ARL2-SNX15V9GYD0 113 aa8.92□□□□□ -0.98
CHMP3-208ENST00000486404 TRAV34A0A0B4J273 112 aa8.91□□□□□ -0.98
CHMP3-208ENST00000486404 A0A1B0GVY2 172 aa8.91□□□□□ -0.98
CHMP3-208ENST00000486404 HMSDA8MTL9 139 aa8.91□□□□□ -0.98
CHMP3-208ENST00000486404 C9JCJ5 164 aa8.91□□□□□ -0.98
CHMP3-208ENST00000486404 ORM1P02763 201 aa8.91□□□□□ -0.98
CHMP3-208ENST00000486404 ZNF80P51504 273 aaPredicted RBP8.91□□□□□ -0.98
CHMP3-208ENST00000486404 MRPL23Q16540 153 aaKnown RBP8.91□□□□□ -0.98
CHMP3-208ENST00000486404 CST9LP1Q5W188 147 aa8.91□□□□□ -0.98
CHMP3-208ENST00000486404 HIST1H2BAQ96A08 127 aa8.91□□□□□ -0.98
CHMP3-208ENST00000486404 UMAD1C9J7I0 102 aa8.9□□□□□ -0.98
CHMP3-208ENST00000486404 GYPEP15421 78 aa8.9□□□□□ -0.98
CHMP3-208ENST00000486404 FHITP49789 147 aa8.9□□□□□ -0.98
CHMP3-208ENST00000486404 FMC1Q96HJ9 113 aa8.9□□□□□ -0.98
CHMP3-208ENST00000486404 LINC00479Q96M42 142 aa8.9□□□□□ -0.98
CHMP3-208ENST00000486404 TCEAL7Q9BRU2 100 aa8.9□□□□□ -0.98
CHMP3-208ENST00000486404 A0A1B0GV50 99 aa8.89□□□□□ -0.99
CHMP3-208ENST00000486404 A0A1W2PPQ1 181 aa8.89□□□□□ -0.99
CHMP3-208ENST00000486404 NXPH4O95158 308 aa8.89□□□□□ -0.99
CHMP3-208ENST00000486404 SEC11BP0C7V7 166 aa8.89□□□□□ -0.99
CHMP3-208ENST00000486404 S100A4P26447 101 aaKnown RBP8.89□□□□□ -0.99
CHMP3-208ENST00000486404 AKR1C3P42330 323 aa8.89□□□□□ -0.99
CHMP3-208ENST00000486404 ZNF876PQ49A33 203 aa8.89□□□□□ -0.99
CHMP3-208ENST00000486404 NEGR1Q7Z3B1 354 aa8.89□□□□□ -0.99
CHMP3-208ENST00000486404 OR11H4Q8NGC9 324 aa8.89□□□□□ -0.99
CHMP3-208ENST00000486404 SFT2D1Q8WV19 159 aa8.89□□□□□ -0.99
CHMP3-208ENST00000486404 TXNDC17Q9BRA2 123 aa8.89□□□□□ -0.99
CHMP3-208ENST00000486404 C11orf21Q9P2W6 132 aa8.89□□□□□ -0.99
CHMP3-208ENST00000486404 K7EQD1 137 aa8.88□□□□□ -0.99
CHMP3-208ENST00000486404 SIVA1O15304 175 aa8.88□□□□□ -0.99
CHMP3-208ENST00000486404 TPT1P13693 172 aaKnown RBP8.88□□□□□ -0.99
CHMP3-208ENST00000486404 ASIPP42127 132 aa8.88□□□□□ -0.99
CHMP3-208ENST00000486404 DPPA3Q6W0C5 159 aa8.88□□□□□ -0.99
CHMP3-208ENST00000486404 NHLRC2Q8NBF2 726 aa8.88□□□□□ -0.99
CHMP3-208ENST00000486404 FABP5P3A8MUU1 101 aa8.87□□□□□ -0.99
CHMP3-208ENST00000486404 FAM162BQ5T6X4 162 aa8.87□□□□□ -0.99
CHMP3-208ENST00000486404 TMUB2Q71RG4 321 aa8.87□□□□□ -0.99
CHMP3-208ENST00000486404 C9orf85Q96MD7 179 aa8.87□□□□□ -0.99
CHMP3-208ENST00000486404 KRTAP1-5Q9BYS1 174 aa8.87□□□□□ -0.99
CHMP3-208ENST00000486404 DNAH2Q9P225 4427 aa8.86□□□□□ -0.99
CHMP3-208ENST00000486404 B4DEV8 164 aa8.86□□□□□ -0.99
CHMP3-208ENST00000486404 PAGE4O60829 102 aa8.86□□□□□ -0.99
CHMP3-208ENST00000486404 GATA1P15976 413 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms