RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 FAM19A2Q8N3H0 131 aa8.96□□□□□ -0.97
PKP4-213ENST00000486254 OR9G4Q8NGQ1 327 aa8.96□□□□□ -0.97
PKP4-213ENST00000486254 YAE1D1Q9NRH1 226 aa8.96□□□□□ -0.97
PKP4-213ENST00000486254 PRSS47A8MTI9 375 aa8.95□□□□□ -0.98
PKP4-213ENST00000486254 ZNF705DP0CH99 300 aaPredicted RBP8.95□□□□□ -0.98
PKP4-213ENST00000486254 ZNF705BP0CI00 300 aaPredicted RBP8.95□□□□□ -0.98
PKP4-213ENST00000486254 EDN2P20800 178 aa8.95□□□□□ -0.98
PKP4-213ENST00000486254 DDTP30046 118 aa8.95□□□□□ -0.98
PKP4-213ENST00000486254 CKS2P33552 79 aa8.95□□□□□ -0.98
PKP4-213ENST00000486254 ASIPP42127 132 aa8.95□□□□□ -0.98
PKP4-213ENST00000486254 KRTDAPP60985 99 aa8.95□□□□□ -0.98
PKP4-213ENST00000486254 FA2HQ7L5A8 372 aa8.95□□□□□ -0.98
PKP4-213ENST00000486254 OR1N2Q8NGR9 330 aa8.95□□□□□ -0.98
PKP4-213ENST00000486254 DPF1Q92782 380 aa8.95□□□□□ -0.98
PKP4-213ENST00000486254 ESM1Q9NQ30 184 aa8.95□□□□□ -0.98
PKP4-213ENST00000486254 HSPB8Q9UJY1 196 aa8.95□□□□□ -0.98
PKP4-213ENST00000486254 RNF114Q9Y508 228 aa8.95□□□□□ -0.98
PKP4-213ENST00000486254 ITPR2Q14571 2701 aa8.95□□□□□ -0.98
PKP4-213ENST00000486254 TCF21O43680 179 aa8.95□□□□□ -0.98
PKP4-213ENST00000486254 NDUFA7O95182 113 aa8.95□□□□□ -0.98
PKP4-213ENST00000486254 LEPROTL1O95214 131 aa8.95□□□□□ -0.98
PKP4-213ENST00000486254 HILS1P60008 231 aa8.95□□□□□ -0.98
PKP4-213ENST00000486254 EBLN2Q6P2I7 272 aa8.95□□□□□ -0.98
PKP4-213ENST00000486254 ADAMTSL5Q6ZMM2 481 aa8.95□□□□□ -0.98
PKP4-213ENST00000486254 OR11H1Q8NG94 326 aa8.95□□□□□ -0.98
PKP4-213ENST00000486254 OR10AG1Q8NH19 301 aa8.95□□□□□ -0.98
PKP4-213ENST00000486254 ZNF418Q8TF45 676 aaPredicted RBP8.95□□□□□ -0.98
PKP4-213ENST00000486254 DUX5Q96PT3 197 aa8.95□□□□□ -0.98
PKP4-213ENST00000486254 TMEM70Q9BUB7 260 aa8.95□□□□□ -0.98
PKP4-213ENST00000486254 SIGLEC8Q9NYZ4 499 aa8.95□□□□□ -0.98
PKP4-213ENST00000486254 ZFHX3Q15911 3703 aa8.94□□□□□ -0.98
PKP4-213ENST00000486254 TRAV25A0A0B4J276 109 aa8.94□□□□□ -0.98
PKP4-213ENST00000486254 C20orf202A1L168 122 aa8.94□□□□□ -0.98
PKP4-213ENST00000486254 F6UB75 175 aa8.94□□□□□ -0.98
PKP4-213ENST00000486254 ZNF688P0C7X2 276 aa8.94□□□□□ -0.98
PKP4-213ENST00000486254 PSMG4Q5JS54 123 aa8.94□□□□□ -0.98
PKP4-213ENST00000486254 SPATA12Q7Z6I5 190 aa8.94□□□□□ -0.98
PKP4-213ENST00000486254 PRSS3P2Q8NHM4 247 aa8.94□□□□□ -0.98
PKP4-213ENST00000486254 MRAP2Q96G30 205 aa8.94□□□□□ -0.98
PKP4-213ENST00000486254 JMJD8Q96S16 334 aa8.94□□□□□ -0.98
PKP4-213ENST00000486254 VAMP8Q9BV40 100 aa8.94□□□□□ -0.98
PKP4-213ENST00000486254 NXT2Q9NPJ8 142 aaKnown RBP8.94□□□□□ -0.98
PKP4-213ENST00000486254 IGKV3-7A0A075B6H7 116 aa8.93□□□□□ -0.98
PKP4-213ENST00000486254 C7orf71A4D174 169 aa8.93□□□□□ -0.98
PKP4-213ENST00000486254 SLURP1P55000 103 aa8.93□□□□□ -0.98
PKP4-213ENST00000486254 CTAG1AP78358 180 aa8.93□□□□□ -0.98
PKP4-213ENST00000486254 ANXA2RQ3ZCQ2 193 aa8.93□□□□□ -0.98
PKP4-213ENST00000486254 SPANXN1Q5VSR9 72 aa8.93□□□□□ -0.98
PKP4-213ENST00000486254 MRPL52Q86TS9 123 aaKnown RBP8.93□□□□□ -0.98
PKP4-213ENST00000486254 KLHL30-AS1Q8NEE0 82 aa8.93□□□□□ -0.98
PKP4-213ENST00000486254 CLUHP3Q96NS8 147 aa8.93□□□□□ -0.98
PKP4-213ENST00000486254 NDUFAF3Q9BU61 184 aa8.93□□□□□ -0.98
PKP4-213ENST00000486254 MAP1LC3AQ9H492 121 aa8.93□□□□□ -0.98
PKP4-213ENST00000486254 MSRB1Q9NZV6 116 aa8.93□□□□□ -0.98
PKP4-213ENST00000486254 H3BVH4 76 aa8.92□□□□□ -0.98
PKP4-213ENST00000486254 NPYP01303 97 aa8.92□□□□□ -0.98
PKP4-213ENST00000486254 CSN3P07498 182 aa8.92□□□□□ -0.98
PKP4-213ENST00000486254 SRD5A1P18405 259 aa8.92□□□□□ -0.98
PKP4-213ENST00000486254 CD33P20138 364 aa8.92□□□□□ -0.98
PKP4-213ENST00000486254 RNASE4P34096 147 aaKnown RBP8.92□□□□□ -0.98
PKP4-213ENST00000486254 CDKN1BP46527 198 aa8.92□□□□□ -0.98
PKP4-213ENST00000486254 PET117Q6UWS5 81 aa8.92□□□□□ -0.98
PKP4-213ENST00000486254 POM121L12Q8N7R1 296 aa8.92□□□□□ -0.98
PKP4-213ENST00000486254 M0R381 172 aa8.91□□□□□ -0.98
PKP4-213ENST00000486254 RNASE3P12724 160 aaKnown RBP8.91□□□□□ -0.98
PKP4-213ENST00000486254 S100A4P26447 101 aaKnown RBP8.91□□□□□ -0.98
PKP4-213ENST00000486254 DEFA6Q01524 100 aa8.91□□□□□ -0.98
PKP4-213ENST00000486254 FAM159AQ6UWV7 190 aa8.91□□□□□ -0.98
PKP4-213ENST00000486254 AMTNQ6UX39 209 aa8.91□□□□□ -0.98
PKP4-213ENST00000486254 C18orf65Q6ZTR6 163 aa8.91□□□□□ -0.98
PKP4-213ENST00000486254 SPAG8Q99932 426 aaPredicted RBP8.91□□□□□ -0.98
PKP4-213ENST00000486254 TSSC4Q9Y5U2 329 aaPredicted RBP8.91□□□□□ -0.98
PKP4-213ENST00000486254 ACANP16112 2415 aa8.91□□□□□ -0.98
PKP4-213ENST00000486254 NBPF19A0A087WUL8 3843 aa8.91□□□□□ -0.98
PKP4-213ENST00000486254 SYS1-DBNDD2H3BUS1 97 aa8.9□□□□□ -0.98
PKP4-213ENST00000486254 K7EMI3 77 aa8.9□□□□□ -0.98
PKP4-213ENST00000486254 TNFRSF6BO95407 300 aa8.9□□□□□ -0.98
PKP4-213ENST00000486254 PPP1R17O96001 155 aa8.9□□□□□ -0.98
PKP4-213ENST00000486254 HLA-DRB4P13762 266 aa8.9□□□□□ -0.98
PKP4-213ENST00000486254 IFI27P40305 119 aaPredicted RBP8.9□□□□□ -0.98
PKP4-213ENST00000486254 DEFB1P60022 68 aa8.9□□□□□ -0.98
PKP4-213ENST00000486254 DEFB136Q30KP8 78 aa8.9□□□□□ -0.98
PKP4-213ENST00000486254 WFDC3Q8IUB2 231 aa8.9□□□□□ -0.98
PKP4-213ENST00000486254 DLX4Q92988 240 aaPredicted RBP8.9□□□□□ -0.98
PKP4-213ENST00000486254 AP1S3Q96PC3 154 aa8.9□□□□□ -0.98
PKP4-213ENST00000486254 MAP1LC3CQ9BXW4 147 aa8.9□□□□□ -0.98
PKP4-213ENST00000486254 PRO1933Q9H354 126 aa8.9□□□□□ -0.98
PKP4-213ENST00000486254 DPH3P1Q9H4G8 78 aa8.9□□□□□ -0.98
PKP4-213ENST00000486254 PHLDA3Q9Y5J5 127 aa8.9□□□□□ -0.98
PKP4-213ENST00000486254 HLA-DRB4X5D2U9 266 aa8.9□□□□□ -0.98
PKP4-213ENST00000486254 MUC21A0A0G2JKD1 596 aa8.9□□□□□ -0.99
PKP4-213ENST00000486254 MUC21A0A140T8X8 626 aa8.9□□□□□ -0.99
PKP4-213ENST00000486254 HBDP02042 147 aa8.9□□□□□ -0.99
PKP4-213ENST00000486254 EVI2AP22794 236 aa8.9□□□□□ -0.99
PKP4-213ENST00000486254 DEFB114Q30KQ6 69 aa8.9□□□□□ -0.99
PKP4-213ENST00000486254 LBHQ53QV2 105 aaPredicted RBP8.9□□□□□ -0.99
PKP4-213ENST00000486254 KHDC1LQ5JSQ8 128 aa8.9□□□□□ -0.99
PKP4-213ENST00000486254 PRR31Q5SQ13 230 aa8.9□□□□□ -0.99
PKP4-213ENST00000486254 MUC21Q5SSG8 566 aa8.9□□□□□ -0.99
PKP4-213ENST00000486254 Q6ZQT7 251 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms