RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 RPS10P46783 165 aaKnown RBP10.61□□□□□ -0.71
COL9A1-207ENST00000486080 MRPL54Q6P161 138 aaKnown RBP10.61□□□□□ -0.71
COL9A1-207ENST00000486080 TRPT1Q86TN4 253 aaKnown RBP10.61□□□□□ -0.71
COL9A1-207ENST00000486080 TPPP3Q9BW30 176 aa10.61□□□□□ -0.71
COL9A1-207ENST00000486080 TRAV9-1A0A075B6T8 112 aa10.6□□□□□ -0.71
COL9A1-207ENST00000486080 FAM231BA6NCW3 169 aa10.6□□□□□ -0.71
COL9A1-207ENST00000486080 WIPF1O43516 503 aa10.6□□□□□ -0.71
COL9A1-207ENST00000486080 ANXA2RQ3ZCQ2 193 aa10.6□□□□□ -0.71
COL9A1-207ENST00000486080 OXLD1Q5BKU9 147 aa10.6□□□□□ -0.71
COL9A1-207ENST00000486080 DEFB125Q8N687 156 aa10.6□□□□□ -0.71
COL9A1-207ENST00000486080 TMA7Q9Y2S6 64 aaKnown RBP10.6□□□□□ -0.71
COL9A1-207ENST00000486080 XKRY2A2RUG3 117 aa10.59□□□□□ -0.71
COL9A1-207ENST00000486080 RBMY1A1P0DJD3 496 aaKnown RBP10.59□□□□□ -0.71
COL9A1-207ENST00000486080 RBMY1CP0DJD4 496 aa10.59□□□□□ -0.71
COL9A1-207ENST00000486080 FOXA3P55318 350 aaPredicted RBP10.59□□□□□ -0.71
COL9A1-207ENST00000486080 RPS20P60866 119 aaKnown RBP10.59□□□□□ -0.71
COL9A1-207ENST00000486080 RBMY1FQ15415 496 aaKnown RBP10.59□□□□□ -0.71
COL9A1-207ENST00000486080 CLUHP3Q96NS8 147 aa10.59□□□□□ -0.71
COL9A1-207ENST00000486080 TYMSP04818 313 aa10.58□□□□□ -0.72
COL9A1-207ENST00000486080 KRTAP21-3Q3LHN1 58 aa10.58□□□□□ -0.72
COL9A1-207ENST00000486080 LYZL1Q6UWQ5 148 aa10.58□□□□□ -0.72
COL9A1-207ENST00000486080 GTSCR1Q86UQ5 136 aa10.58□□□□□ -0.72
COL9A1-207ENST00000486080 MUC21A0A0G2JKD1 596 aa10.58□□□□□ -0.72
COL9A1-207ENST00000486080 MUC21A0A140T8X8 626 aa10.58□□□□□ -0.72
COL9A1-207ENST00000486080 GNRH2O43555 120 aa10.58□□□□□ -0.72
COL9A1-207ENST00000486080 IGLC6P0CF74 106 aa10.58□□□□□ -0.72
COL9A1-207ENST00000486080 RPL35AP18077 110 aaKnown RBP10.58□□□□□ -0.72
COL9A1-207ENST00000486080 SSTP61278 116 aa10.58□□□□□ -0.72
COL9A1-207ENST00000486080 ARMS2P0C7Q2 107 aa10.57□□□□□ -0.72
COL9A1-207ENST00000486080 PRR31Q5SQ13 230 aa10.57□□□□□ -0.72
COL9A1-207ENST00000486080 FER1L6-AS1Q8NA97 138 aa10.57□□□□□ -0.72
COL9A1-207ENST00000486080 SRD5A3Q9H8P0 318 aa10.57□□□□□ -0.72
COL9A1-207ENST00000486080 XCL2Q9UBD3 114 aa10.57□□□□□ -0.72
COL9A1-207ENST00000486080 Q8N1Y9 231 aa10.56□□□□□ -0.72
COL9A1-207ENST00000486080 TRGC2P03986 189 aa10.56□□□□□ -0.72
COL9A1-207ENST00000486080 FAM159AQ6UWV7 190 aa10.56□□□□□ -0.72
COL9A1-207ENST00000486080 TP53TG3Q9ULZ0 132 aa10.56□□□□□ -0.72
COL9A1-207ENST00000486080 A0A1B0GUT8 65 aa10.55□□□□□ -0.72
COL9A1-207ENST00000486080 A0A1B0GXF2 115 aa10.55□□□□□ -0.72
COL9A1-207ENST00000486080 GIG44P09565 113 aaPredicted RBP10.55□□□□□ -0.72
COL9A1-207ENST00000486080 CTRLP40313 264 aa10.55□□□□□ -0.72
COL9A1-207ENST00000486080 CAMPP49913 170 aa10.55□□□□□ -0.72
COL9A1-207ENST00000486080 KRTAP10-11P60412 298 aa10.55□□□□□ -0.72
COL9A1-207ENST00000486080 TIMM8BQ9Y5J9 83 aaPredicted RBP10.55□□□□□ -0.72
COL9A1-207ENST00000486080 IGHV1OR15-1A0A075B7D0 117 aa10.54□□□□□ -0.72
COL9A1-207ENST00000486080 H3BVH4 76 aa10.54□□□□□ -0.72
COL9A1-207ENST00000486080 SPRY2O43597 315 aa10.54□□□□□ -0.72
COL9A1-207ENST00000486080 PRM2P04554 102 aa10.54□□□□□ -0.72
COL9A1-207ENST00000486080 INSP01308 110 aa10.54□□□□□ -0.72
COL9A1-207ENST00000486080 RAB4BP61018 213 aa10.54□□□□□ -0.72
COL9A1-207ENST00000486080 NUTF2P61970 127 aaKnown RBP10.54□□□□□ -0.72
COL9A1-207ENST00000486080 TDRG1Q3Y452 100 aa10.54□□□□□ -0.72
COL9A1-207ENST00000486080 TMEM136Q6ZRR5 245 aa10.54□□□□□ -0.72
COL9A1-207ENST00000486080 ATP5L2Q7Z4Y8 100 aa10.54□□□□□ -0.72
COL9A1-207ENST00000486080 ZFP82Q8N141 532 aa10.54□□□□□ -0.72
COL9A1-207ENST00000486080 MUC4Q99102 2169 aa10.53□□□□□ -0.72
COL9A1-207ENST00000486080 SNURFLB1AK76 121 aa10.53□□□□□ -0.72
COL9A1-207ENST00000486080 PHOX2AO14813 284 aa10.53□□□□□ -0.72
COL9A1-207ENST00000486080 HTN1P15515 57 aa10.53□□□□□ -0.72
COL9A1-207ENST00000486080 ASIPP42127 132 aa10.53□□□□□ -0.72
COL9A1-207ENST00000486080 HBBP68871 147 aa10.53□□□□□ -0.72
COL9A1-207ENST00000486080 FABP9Q0Z7S8 132 aa10.53□□□□□ -0.72
COL9A1-207ENST00000486080 KCNS1Q96KK3 526 aa10.53□□□□□ -0.72
COL9A1-207ENST00000486080 SSBP4Q9BWG4 385 aaPredicted RBP10.53□□□□□ -0.72
COL9A1-207ENST00000486080 MSRB1Q9NZV6 116 aa10.53□□□□□ -0.72
COL9A1-207ENST00000486080 TRAPPC1Q9Y5R8 145 aa10.53□□□□□ -0.72
COL9A1-207ENST00000486080 AMBPP02760 352 aa10.52□□□□□ -0.73
COL9A1-207ENST00000486080 RNASE3P12724 160 aaKnown RBP10.52□□□□□ -0.73
COL9A1-207ENST00000486080 S100A4P26447 101 aaKnown RBP10.52□□□□□ -0.73
COL9A1-207ENST00000486080 RIGQ13278 110 aa10.52□□□□□ -0.73
COL9A1-207ENST00000486080 C1orf158Q8N1D5 194 aa10.52□□□□□ -0.73
COL9A1-207ENST00000486080 OR10AG1Q8NH19 301 aa10.52□□□□□ -0.73
COL9A1-207ENST00000486080 BORCS7Q96B45 105 aa10.52□□□□□ -0.73
COL9A1-207ENST00000486080 GNB1LQ9BYB4 327 aa10.52□□□□□ -0.73
COL9A1-207ENST00000486080 MDFICQ9P1T7 246 aa10.52□□□□□ -0.73
COL9A1-207ENST00000486080 C1orf196B1AJZ1 125 aa10.51□□□□□ -0.73
COL9A1-207ENST00000486080 F2Z2F3 143 aa10.51□□□□□ -0.73
COL9A1-207ENST00000486080 G3V4G9 280 aa10.51□□□□□ -0.73
COL9A1-207ENST00000486080 SNAI2O43623 268 aa10.51□□□□□ -0.73
COL9A1-207ENST00000486080 OR5AL1P0C617 328 aa10.51□□□□□ -0.73
COL9A1-207ENST00000486080 NTF3P20783 257 aa10.51□□□□□ -0.73
COL9A1-207ENST00000486080 FRZBQ92765 325 aa10.51□□□□□ -0.73
COL9A1-207ENST00000486080 LINC01587Q99440 93 aa10.51□□□□□ -0.73
COL9A1-207ENST00000486080 IGHV3-16A0A0C4DH30 117 aa10.51□□□□□ -0.73
COL9A1-207ENST00000486080 EGFEM1PQ0D2K5 195 aa10.51□□□□□ -0.73
COL9A1-207ENST00000486080 TWIST1Q15672 202 aa10.51□□□□□ -0.73
COL9A1-207ENST00000486080 DNLZQ5SXM8 178 aa10.51□□□□□ -0.73
COL9A1-207ENST00000486080 WDR73Q6P4I2 378 aa10.51□□□□□ -0.73
COL9A1-207ENST00000486080 RASL11AQ6T310 242 aa10.51□□□□□ -0.73
COL9A1-207ENST00000486080 CNFNQ9BYD5 112 aa10.51□□□□□ -0.73
COL9A1-207ENST00000486080 MRPL18Q9H0U6 180 aaKnown RBP10.51□□□□□ -0.73
COL9A1-207ENST00000486080 IGHV3OR16-12A0A075B7B8 117 aa10.5□□□□□ -0.73
COL9A1-207ENST00000486080 CBY3A6NI87 242 aa10.5□□□□□ -0.73
COL9A1-207ENST00000486080 SCRT2Q9NQ03 307 aa10.5□□□□□ -0.73
COL9A1-207ENST00000486080 SLAQ13239 276 aa10.49□□□□□ -0.73
COL9A1-207ENST00000486080 COX19Q49B96 90 aa10.49□□□□□ -0.73
COL9A1-207ENST00000486080 MORN3Q6PF18 240 aaPredicted RBP10.49□□□□□ -0.73
COL9A1-207ENST00000486080 C20orf144Q9BQM9 153 aa10.49□□□□□ -0.73
COL9A1-207ENST00000486080 TMEM208Q9BTX3 173 aa10.49□□□□□ -0.73
COL9A1-207ENST00000486080 HLA-DQA1P01909 254 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms