RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 SDF2L1Q9HCN8 221 aa9.38□□□□□ -0.91
SCAF4-206ENST00000485790 TREM1Q9NP99 234 aa9.38□□□□□ -0.91
SCAF4-206ENST00000485790 RPH3ALQ9UNE2 315 aa9.38□□□□□ -0.91
SCAF4-206ENST00000485790 CIDEAO60543 219 aa9.37□□□□□ -0.91
SCAF4-206ENST00000485790 PFN1P07737 140 aaKnown RBP9.37□□□□□ -0.91
SCAF4-206ENST00000485790 GOLT1AQ6ZVE7 132 aa9.37□□□□□ -0.91
SCAF4-206ENST00000485790 OR10G9Q8NGN4 311 aa9.37□□□□□ -0.91
SCAF4-206ENST00000485790 OR10G7Q8NGN6 311 aa9.37□□□□□ -0.91
SCAF4-206ENST00000485790 TNFRSF18Q9Y5U5 241 aa9.37□□□□□ -0.91
SCAF4-206ENST00000485790 LRP1BQ9NZR2 4599 aa9.37□□□□□ -0.91
SCAF4-206ENST00000485790 SERTM2A0A1B0GWG4 89 aa9.36□□□□□ -0.91
SCAF4-206ENST00000485790 EPM2AB3EWF7 344 aa9.36□□□□□ -0.91
SCAF4-206ENST00000485790 DNAH10OSP0CZ25 163 aa9.36□□□□□ -0.91
SCAF4-206ENST00000485790 IFITM3Q01628 133 aa9.36□□□□□ -0.91
SCAF4-206ENST00000485790 NHLRC2Q8NBF2 726 aa9.36□□□□□ -0.91
SCAF4-206ENST00000485790 ASB13Q8WXK3 278 aa9.36□□□□□ -0.91
SCAF4-206ENST00000485790 HSPG2P98160 4391 aa9.36□□□□□ -0.91
SCAF4-206ENST00000485790 DNAH5Q8TE73 4624 aa9.36□□□□□ -0.91
SCAF4-206ENST00000485790 A0A087WTM6 91 aa9.35□□□□□ -0.91
SCAF4-206ENST00000485790 TRAV8-6A0A0B4J262 113 aa9.35□□□□□ -0.91
SCAF4-206ENST00000485790 IGHV3-16A0A0C4DH30 117 aa9.35□□□□□ -0.91
SCAF4-206ENST00000485790 TAAR5O14804 337 aa9.35□□□□□ -0.91
SCAF4-206ENST00000485790 CRYGDP07320 174 aa9.35□□□□□ -0.91
SCAF4-206ENST00000485790 SH3BGRL3Q9H299 93 aa9.35□□□□□ -0.91
SCAF4-206ENST00000485790 PSCAO43653 123 aa9.34□□□□□ -0.91
SCAF4-206ENST00000485790 MBP02144 154 aa9.34□□□□□ -0.91
SCAF4-206ENST00000485790 PPT1P50897 306 aa9.34□□□□□ -0.91
SCAF4-206ENST00000485790 TIRAPP58753 221 aa9.34□□□□□ -0.91
SCAF4-206ENST00000485790 ZNF876PQ49A33 203 aa9.34□□□□□ -0.91
SCAF4-206ENST00000485790 PRADC1Q9BSG0 188 aa9.34□□□□□ -0.91
SCAF4-206ENST00000485790 IGHV3-38A0A0C4DH36 116 aa9.33□□□□□ -0.92
SCAF4-206ENST00000485790 FBLL1A6NHQ2 334 aaKnown RBP9.33□□□□□ -0.92
SCAF4-206ENST00000485790 WFDC10BQ8IUB3 73 aa9.33□□□□□ -0.92
SCAF4-206ENST00000485790 WFDC1Q9HC57 220 aa9.33□□□□□ -0.92
SCAF4-206ENST00000485790 A6NHS1 94 aa9.32□□□□□ -0.92
SCAF4-206ENST00000485790 HMGB3O15347 200 aaKnown RBP9.32□□□□□ -0.92
SCAF4-206ENST00000485790 EIF3GO75821 320 aaKnown RBP eCLIP9.32□□□□□ -0.92
SCAF4-206ENST00000485790 RAB2AP61019 212 aa9.32□□□□□ -0.92
SCAF4-206ENST00000485790 ZFP69Q49AA0 526 aa9.32□□□□□ -0.92
SCAF4-206ENST00000485790 DMRTA1Q5VZB9 504 aa9.32□□□□□ -0.92
SCAF4-206ENST00000485790 TRAV8-1A0A0A6YYK1 113 aa9.31□□□□□ -0.92
SCAF4-206ENST00000485790 TRBV6-4A0A1B0GX49 114 aa9.31□□□□□ -0.92
SCAF4-206ENST00000485790 F6UZH7 168 aa9.31□□□□□ -0.92
SCAF4-206ENST00000485790 TYMSP04818 313 aa9.31□□□□□ -0.92
SCAF4-206ENST00000485790 GATA1P15976 413 aaPredicted RBP9.31□□□□□ -0.92
SCAF4-206ENST00000485790 GCSHP23434 173 aa9.31□□□□□ -0.92
SCAF4-206ENST00000485790 CDC34P49427 236 aaPredicted RBP9.31□□□□□ -0.92
SCAF4-206ENST00000485790 SERF2P84101 59 aa9.31□□□□□ -0.92
SCAF4-206ENST00000485790 OR10J3Q5JRS4 329 aa9.31□□□□□ -0.92
SCAF4-206ENST00000485790 SAPCD1Q5SSQ6 148 aa9.31□□□□□ -0.92
SCAF4-206ENST00000485790 C5orf17Q8NAS9 161 aa9.31□□□□□ -0.92
SCAF4-206ENST00000485790 FRZBQ92765 325 aa9.31□□□□□ -0.92
SCAF4-206ENST00000485790 TVP23CQ96ET8 276 aa9.31□□□□□ -0.92
SCAF4-206ENST00000485790 TMEM167BQ9NRX6 74 aa9.31□□□□□ -0.92
SCAF4-206ENST00000485790 TCRAP04437 139 aa9.3□□□□□ -0.92
SCAF4-206ENST00000485790 ARL14EPLP0DKL9 152 aa9.3□□□□□ -0.92
SCAF4-206ENST00000485790 SUMO1P63165 101 aaKnown RBP9.3□□□□□ -0.92
SCAF4-206ENST00000485790 GNG5P63218 68 aa9.3□□□□□ -0.92
SCAF4-206ENST00000485790 RHOHQ15669 191 aa9.3□□□□□ -0.92
SCAF4-206ENST00000485790 SMUG1Q53HV7 270 aa9.3□□□□□ -0.92
SCAF4-206ENST00000485790 SLC25A29Q8N8R3 303 aa9.3□□□□□ -0.92
SCAF4-206ENST00000485790 OR2G3Q8NGZ4 309 aa9.3□□□□□ -0.92
SCAF4-206ENST00000485790 RAB24Q969Q5 203 aa9.3□□□□□ -0.92
SCAF4-206ENST00000485790 SGK494Q96LW2 274 aa9.3□□□□□ -0.92
SCAF4-206ENST00000485790 ACTR3CQ9C0K3 210 aaPredicted RBP9.3□□□□□ -0.92
SCAF4-206ENST00000485790 EPDR1Q9UM22 224 aa9.3□□□□□ -0.92
SCAF4-206ENST00000485790 PSG8Q9UQ74 426 aa9.3□□□□□ -0.92
SCAF4-206ENST00000485790 IBA57-AS1B1ANH7 110 aa9.29□□□□□ -0.92
SCAF4-206ENST00000485790 CXorf1O96002 111 aa9.29□□□□□ -0.92
SCAF4-206ENST00000485790 GCGP01275 180 aa9.29□□□□□ -0.92
SCAF4-206ENST00000485790 STAG3L2P0CL84 134 aa9.29□□□□□ -0.92
SCAF4-206ENST00000485790 STAG3L3P0CL85 134 aa9.29□□□□□ -0.92
SCAF4-206ENST00000485790 INAFM2P0DMQ5 153 aa9.29□□□□□ -0.92
SCAF4-206ENST00000485790 GCHFRP30047 84 aa9.29□□□□□ -0.92
SCAF4-206ENST00000485790 LINC01556Q5JQF7 62 aa9.29□□□□□ -0.92
SCAF4-206ENST00000485790 CFAP126Q5VTH2 177 aa9.29□□□□□ -0.92
SCAF4-206ENST00000485790 HSD17B11Q8NBQ5 300 aa9.29□□□□□ -0.92
SCAF4-206ENST00000485790 PTH2Q96A98 100 aa9.29□□□□□ -0.92
SCAF4-206ENST00000485790 PSMG3Q9BT73 122 aaPredicted RBP9.29□□□□□ -0.92
SCAF4-206ENST00000485790 TNFSF18Q9UNG2 199 aa9.29□□□□□ -0.92
SCAF4-206ENST00000485790 APOBP04114 4563 aaKnown RBP9.29□□□□□ -0.92
SCAF4-206ENST00000485790 LOC100131303A0A0U1RQF7 123 aa9.28□□□□□ -0.92
SCAF4-206ENST00000485790 FAM229AH3BQW9 127 aa9.28□□□□□ -0.92
SCAF4-206ENST00000485790 RS1O15537 224 aa9.28□□□□□ -0.92
SCAF4-206ENST00000485790 MGST1P10620 155 aaKnown RBP9.28□□□□□ -0.92
SCAF4-206ENST00000485790 FUSP35637 526 aaKnown RBP eCLIP9.28□□□□□ -0.92
SCAF4-206ENST00000485790 XGP55808 180 aa9.28□□□□□ -0.92
SCAF4-206ENST00000485790 FLI1Q01543 452 aaPredicted RBP9.28□□□□□ -0.92
SCAF4-206ENST00000485790 PRNTQ86SH4 94 aa9.28□□□□□ -0.92
SCAF4-206ENST00000485790 SUN5Q8TC36 379 aa9.28□□□□□ -0.92
SCAF4-206ENST00000485790 NTN5Q8WTR8 489 aaPredicted RBP9.28□□□□□ -0.92
SCAF4-206ENST00000485790 TM2D2Q9BX73 214 aa9.28□□□□□ -0.92
SCAF4-206ENST00000485790 MED28Q9H204 178 aa9.28□□□□□ -0.92
SCAF4-206ENST00000485790 IGLV5-52A0A0A0MRZ9 124 aa9.27□□□□□ -0.93
SCAF4-206ENST00000485790 S100A4P26447 101 aaKnown RBP9.27□□□□□ -0.93
SCAF4-206ENST00000485790 KRTAP10-1P60331 282 aa9.27□□□□□ -0.93
SCAF4-206ENST00000485790 LELP1Q5T871 98 aa9.27□□□□□ -0.93
SCAF4-206ENST00000485790 CYB561D1Q8N8Q1 229 aa9.27□□□□□ -0.93
SCAF4-206ENST00000485790 INO80EQ8NBZ0 244 aaPredicted RBP9.27□□□□□ -0.93
SCAF4-206ENST00000485790 ATP6V0E2Q8NHE4 81 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms