RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 GCGP01275 180 aa12.54□□□□□ -0.4
SREBF1-213ENST00000485080 PFN1P07737 140 aaKnown RBP12.54□□□□□ -0.4
SREBF1-213ENST00000485080 ZNF80P51504 273 aaPredicted RBP12.54□□□□□ -0.4
SREBF1-213ENST00000485080 ZNF415Q09FC8 603 aa12.54□□□□□ -0.4
SREBF1-213ENST00000485080 TMEM183BQ1AE95 376 aa12.54□□□□□ -0.4
SREBF1-213ENST00000485080 MUC21Q5SSG8 566 aa12.54□□□□□ -0.4
SREBF1-213ENST00000485080 Q86TA4 180 aa12.54□□□□□ -0.4
SREBF1-213ENST00000485080 C8orf49Q96NF6 230 aa12.54□□□□□ -0.4
SREBF1-213ENST00000485080 A0A1B0GV50 99 aa12.53□□□□□ -0.4
SREBF1-213ENST00000485080 S100A9P06702 114 aaKnown RBP12.53□□□□□ -0.4
SREBF1-213ENST00000485080 CCL20P78556 96 aa12.53□□□□□ -0.4
SREBF1-213ENST00000485080 Q6ZTI0 123 aa12.53□□□□□ -0.4
SREBF1-213ENST00000485080 SPXQ9BT56 116 aa12.53□□□□□ -0.4
SREBF1-213ENST00000485080 TMEM183AQ8IXX5 376 aa12.52□□□□□ -0.41
SREBF1-213ENST00000485080 MDFICQ9P1T7 246 aa12.52□□□□□ -0.41
SREBF1-213ENST00000485080 IGHV3-16A0A0C4DH30 117 aa12.51□□□□□ -0.41
SREBF1-213ENST00000485080 GAGE12BA1L429 117 aa12.51□□□□□ -0.41
SREBF1-213ENST00000485080 GAGE7O76087 117 aa12.51□□□□□ -0.41
SREBF1-213ENST00000485080 LTAP01374 205 aa12.51□□□□□ -0.41
SREBF1-213ENST00000485080 GAGE12FP0CL80 117 aa12.51□□□□□ -0.41
SREBF1-213ENST00000485080 GAGE12GP0CL81 117 aa12.51□□□□□ -0.41
SREBF1-213ENST00000485080 GAGE12IP0CL82 117 aa12.51□□□□□ -0.41
SREBF1-213ENST00000485080 HTN3P15516 51 aa12.51□□□□□ -0.41
SREBF1-213ENST00000485080 NKX2-5P52952 324 aaPredicted RBP12.51□□□□□ -0.41
SREBF1-213ENST00000485080 UBE2G1P62253 170 aa12.51□□□□□ -0.41
SREBF1-213ENST00000485080 SDF2L1Q9HCN8 221 aa12.51□□□□□ -0.41
SREBF1-213ENST00000485080 C11orf21Q9P2W6 132 aa12.51□□□□□ -0.41
SREBF1-213ENST00000485080 TRGV1A0A0A0MS02 117 aa12.5□□□□□ -0.41
SREBF1-213ENST00000485080 FABP5P3A8MUU1 101 aa12.5□□□□□ -0.41
SREBF1-213ENST00000485080 LY6G6CO95867 125 aa12.5□□□□□ -0.41
SREBF1-213ENST00000485080 AKR1C3P42330 323 aa12.5□□□□□ -0.41
SREBF1-213ENST00000485080 TMEM88Q6PEY1 159 aa12.5□□□□□ -0.41
SREBF1-213ENST00000485080 C15orf53Q8NAA6 179 aa12.5□□□□□ -0.41
SREBF1-213ENST00000485080 RASL10AQ92737 203 aa12.5□□□□□ -0.41
SREBF1-213ENST00000485080 C11orf52Q96A22 123 aa12.5□□□□□ -0.41
SREBF1-213ENST00000485080 GNG13Q9P2W3 67 aa12.5□□□□□ -0.41
SREBF1-213ENST00000485080 NAGKQ9UJ70 344 aa12.5□□□□□ -0.41
SREBF1-213ENST00000485080 F5H768 121 aa12.49□□□□□ -0.41
SREBF1-213ENST00000485080 GNRH2O43555 120 aa12.49□□□□□ -0.41
SREBF1-213ENST00000485080 TYMSP04818 313 aa12.49□□□□□ -0.41
SREBF1-213ENST00000485080 TAGLN2P37802 199 aaKnown RBP12.49□□□□□ -0.41
SREBF1-213ENST00000485080 TRGV2A0A075B6R0 118 aa12.48□□□□□ -0.41
SREBF1-213ENST00000485080 SCO2A0A1W2PP80 73 aa12.48□□□□□ -0.41
SREBF1-213ENST00000485080 CRIP1P50238 77 aa12.48□□□□□ -0.41
SREBF1-213ENST00000485080 BLOC1S1P78537 153 aa12.48□□□□□ -0.41
SREBF1-213ENST00000485080 LYPD6BQ8NI32 183 aa12.48□□□□□ -0.41
SREBF1-213ENST00000485080 ZC2HC1AQ96GY0 325 aa12.48□□□□□ -0.41
SREBF1-213ENST00000485080 H3BNG1 76 aa12.47□□□□□ -0.41
SREBF1-213ENST00000485080 IFNA1P01562 189 aa12.47□□□□□ -0.41
SREBF1-213ENST00000485080 P0DMU3 169 aa12.47□□□□□ -0.41
SREBF1-213ENST00000485080 FAM231AP0DMU4 169 aa12.47□□□□□ -0.41
SREBF1-213ENST00000485080 FAM231CP0DMU5 169 aa12.47□□□□□ -0.41
SREBF1-213ENST00000485080 ZNF674Q2M3X9 581 aa12.47□□□□□ -0.41
SREBF1-213ENST00000485080 ALKAL2Q6UX46 152 aa12.47□□□□□ -0.41
SREBF1-213ENST00000485080 PTH2Q96A98 100 aa12.47□□□□□ -0.41
SREBF1-213ENST00000485080 MLST8Q9BVC4 326 aa12.47□□□□□ -0.41
SREBF1-213ENST00000485080 M0R2P5 195 aa12.46□□□□□ -0.41
SREBF1-213ENST00000485080 BCL2P10415 239 aa12.46□□□□□ -0.41
SREBF1-213ENST00000485080 HOXA5P20719 270 aa12.46□□□□□ -0.41
SREBF1-213ENST00000485080 MEF2BQ02080 365 aaPredicted RBP12.46□□□□□ -0.41
SREBF1-213ENST00000485080 FAM162BQ5T6X4 162 aa12.46□□□□□ -0.41
SREBF1-213ENST00000485080 MRPL16Q9NX20 251 aaKnown RBP12.46□□□□□ -0.41
SREBF1-213ENST00000485080 IGKV3D-20A0A0C4DH25 116 aa12.45□□□□□ -0.42
SREBF1-213ENST00000485080 PDE6DO43924 150 aa12.45□□□□□ -0.42
SREBF1-213ENST00000485080 DNLZQ5SXM8 178 aa12.45□□□□□ -0.42
SREBF1-213ENST00000485080 C9orf85Q96MD7 179 aa12.45□□□□□ -0.42
SREBF1-213ENST00000485080 VAX2Q9UIW0 290 aa12.45□□□□□ -0.42
SREBF1-213ENST00000485080 DNAH10Q8IVF4 4471 aa12.45□□□□□ -0.42
SREBF1-213ENST00000485080 RPL35P42766 123 aaKnown RBP12.44□□□□□ -0.42
SREBF1-213ENST00000485080 BAGE2Q86Y30 109 aa12.44□□□□□ -0.42
SREBF1-213ENST00000485080 SH2D1AO60880 128 aa12.43□□□□□ -0.42
SREBF1-213ENST00000485080 SLAQ13239 276 aa12.43□□□□□ -0.42
SREBF1-213ENST00000485080 OR5I1Q13606 314 aa12.43□□□□□ -0.42
SREBF1-213ENST00000485080 RNF212Q495C1 297 aa12.43□□□□□ -0.42
SREBF1-213ENST00000485080 PIK3CD-AS1Q5SR53 167 aa12.43□□□□□ -0.42
SREBF1-213ENST00000485080 TRAV26-1A0A087WT03 109 aa12.42□□□□□ -0.42
SREBF1-213ENST00000485080 KRBOX1C9JBD0 128 aa12.42□□□□□ -0.42
SREBF1-213ENST00000485080 RNASE3P12724 160 aaKnown RBP12.42□□□□□ -0.42
SREBF1-213ENST00000485080 LINC01559Q495D7 138 aa12.42□□□□□ -0.42
SREBF1-213ENST00000485080 ZNF575Q86XF7 245 aa12.42□□□□□ -0.42
SREBF1-213ENST00000485080 POM121L12Q8N7R1 296 aa12.42□□□□□ -0.42
SREBF1-213ENST00000485080 SMIM12Q96EX1 92 aa12.42□□□□□ -0.42
SREBF1-213ENST00000485080 TRAV4A0A0B4J268 109 aa12.41□□□□□ -0.42
SREBF1-213ENST00000485080 B4DEV8 164 aa12.41□□□□□ -0.42
SREBF1-213ENST00000485080 NDUFS6O75380 124 aaKnown RBP12.41□□□□□ -0.42
SREBF1-213ENST00000485080 ORM1P02763 201 aa12.41□□□□□ -0.42
SREBF1-213ENST00000485080 FAM3BP58499 235 aaPredicted RBP12.41□□□□□ -0.42
SREBF1-213ENST00000485080 FHL2Q14192 279 aa12.41□□□□□ -0.42
SREBF1-213ENST00000485080 DMRTA1Q5VZB9 504 aa12.41□□□□□ -0.42
SREBF1-213ENST00000485080 VSIG2Q96IQ7 327 aa12.41□□□□□ -0.42
SREBF1-213ENST00000485080 IL36BQ9NZH7 164 aa12.41□□□□□ -0.42
SREBF1-213ENST00000485080 DNAH2Q9P225 4427 aa12.4□□□□□ -0.42
SREBF1-213ENST00000485080 CIDEAO60543 219 aa12.4□□□□□ -0.42
SREBF1-213ENST00000485080 DERL1Q9BUN8 251 aa12.4□□□□□ -0.42
SREBF1-213ENST00000485080 PRO0255Q9UI72 69 aa12.4□□□□□ -0.42
SREBF1-213ENST00000485080 CXCL1P09341 107 aa12.39□□□□□ -0.43
SREBF1-213ENST00000485080 ASIPP42127 132 aa12.39□□□□□ -0.43
SREBF1-213ENST00000485080 ZNF876PQ49A33 203 aa12.39□□□□□ -0.43
SREBF1-213ENST00000485080 NHLRC2Q8NBF2 726 aa12.39□□□□□ -0.43
SREBF1-213ENST00000485080 S100A4P26447 101 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms