RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 AK3Q9UIJ7 227 aa3.88□□□□□ -1.79
CCDC39-205ENST00000485055 DNAH9Q9NYC9 4486 aa3.87□□□□□ -1.79
CCDC39-205ENST00000485055 IGKV1-6A0A0C4DH72 117 aa3.87□□□□□ -1.79
CCDC39-205ENST00000485055 K7EPK0 472 aa3.87□□□□□ -1.79
CCDC39-205ENST00000485055 LGALS9O00182 355 aa3.87□□□□□ -1.79
CCDC39-205ENST00000485055 PSPHP1O15172 72 aa3.87□□□□□ -1.79
CCDC39-205ENST00000485055 GSTZ1O43708 216 aaPredicted RBP3.87□□□□□ -1.79
CCDC39-205ENST00000485055 HIST1H1DP16402 221 aaKnown RBP3.87□□□□□ -1.79
CCDC39-205ENST00000485055 ATP6V0CP27449 155 aa3.87□□□□□ -1.79
CCDC39-205ENST00000485055 VMA21Q3ZAQ7 101 aa3.87□□□□□ -1.79
CCDC39-205ENST00000485055 EBLN2Q6P2I7 272 aa3.87□□□□□ -1.79
CCDC39-205ENST00000485055 ZNF773Q6PK81 442 aa3.87□□□□□ -1.79
CCDC39-205ENST00000485055 Q6Q795 121 aa3.87□□□□□ -1.79
CCDC39-205ENST00000485055 LINC00322Q6ZN03 302 aaPredicted RBP3.87□□□□□ -1.79
CCDC39-205ENST00000485055 TTC9CQ8N5M4 171 aa3.87□□□□□ -1.79
CCDC39-205ENST00000485055 TAF15Q92804 592 aaKnown RBP eCLIP3.87□□□□□ -1.79
CCDC39-205ENST00000485055 ABHD14BQ96IU4 210 aa3.87□□□□□ -1.79
CCDC39-205ENST00000485055 C18orf15Q96N68 181 aa3.87□□□□□ -1.79
CCDC39-205ENST00000485055 TP73-AS1Q9UF72 201 aa3.87□□□□□ -1.79
CCDC39-205ENST00000485055 PKD1L1Q8TDX9 2849 aa3.87□□□□□ -1.79
CCDC39-205ENST00000485055 DYNC2H1Q8NCM8 4307 aaKnown RBP3.87□□□□□ -1.79
CCDC39-205ENST00000485055 TRAV41A0A0B4J266 112 aa3.87□□□□□ -1.79
CCDC39-205ENST00000485055 FAM223BA6NKX1 122 aa3.87□□□□□ -1.79
CCDC39-205ENST00000485055 GGTLC3B5MD39 225 aa3.87□□□□□ -1.79
CCDC39-205ENST00000485055 M0R1X1 148 aa3.87□□□□□ -1.79
CCDC39-205ENST00000485055 CREBL2O60519 120 aaPredicted RBP3.87□□□□□ -1.79
CCDC39-205ENST00000485055 IFNA7P01567 189 aa3.87□□□□□ -1.79
CCDC39-205ENST00000485055 OPRK1P41145 380 aa3.87□□□□□ -1.79
CCDC39-205ENST00000485055 AQP4P55087 323 aa3.87□□□□□ -1.79
CCDC39-205ENST00000485055 Q6ZRP5 223 aa3.87□□□□□ -1.79
CCDC39-205ENST00000485055 FAM223AQ8IWN6 122 aa3.87□□□□□ -1.79
CCDC39-205ENST00000485055 C3orf22Q8N5N4 141 aa3.87□□□□□ -1.79
CCDC39-205ENST00000485055 BPIFB6Q8NFQ5 453 aa3.87□□□□□ -1.79
CCDC39-205ENST00000485055 KCNS1Q96KK3 526 aa3.87□□□□□ -1.79
CCDC39-205ENST00000485055 KLK15Q9H2R5 256 aa3.87□□□□□ -1.79
CCDC39-205ENST00000485055 TNFRSF19Q9NS68 423 aa3.87□□□□□ -1.79
CCDC39-205ENST00000485055 TRAV8-1A0A0A6YYK1 113 aa3.86□□□□□ -1.79
CCDC39-205ENST00000485055 B4DEV8 164 aa3.86□□□□□ -1.79
CCDC39-205ENST00000485055 FNDC10F2Z333 226 aa3.86□□□□□ -1.79
CCDC39-205ENST00000485055 INS-IGF2F8WCM5 200 aa3.86□□□□□ -1.79
CCDC39-205ENST00000485055 LST1O00453 97 aa3.86□□□□□ -1.79
CCDC39-205ENST00000485055 NFYBP25208 207 aa3.86□□□□□ -1.79
CCDC39-205ENST00000485055 HES1Q14469 280 aa3.86□□□□□ -1.79
CCDC39-205ENST00000485055 LCE2CQ5TA81 110 aa3.86□□□□□ -1.79
CCDC39-205ENST00000485055 GINS4Q9BRT9 223 aa3.86□□□□□ -1.79
CCDC39-205ENST00000485055 KIAA2026Q5HYC2 2103 aa3.86□□□□□ -1.79
CCDC39-205ENST00000485055 IGHV1OR15-1A0A075B7D0 117 aa3.86□□□□□ -1.79
CCDC39-205ENST00000485055 C3orf84H3BNL1 204 aa3.86□□□□□ -1.79
CCDC39-205ENST00000485055 SOCS1O15524 211 aa3.86□□□□□ -1.79
CCDC39-205ENST00000485055 APOMO95445 188 aa3.86□□□□□ -1.79
CCDC39-205ENST00000485055 TRGC2P03986 189 aa3.86□□□□□ -1.79
CCDC39-205ENST00000485055 SPINK8P0C7L1 97 aa3.86□□□□□ -1.79
CCDC39-205ENST00000485055 NDUFV3P56181 108 aaKnown RBP3.86□□□□□ -1.79
CCDC39-205ENST00000485055 PRB3Q04118 309 aaPredicted RBP3.86□□□□□ -1.79
CCDC39-205ENST00000485055 AMMECR1LQ6DCA0 310 aa3.86□□□□□ -1.79
CCDC39-205ENST00000485055 LCN15Q6UWW0 184 aa3.86□□□□□ -1.79
CCDC39-205ENST00000485055 OR10D4PQ8NGN7 298 aa3.86□□□□□ -1.79
CCDC39-205ENST00000485055 ST6GAL2Q96JF0 529 aa3.86□□□□□ -1.79
CCDC39-205ENST00000485055 TM2D3Q9BRN9 247 aa3.86□□□□□ -1.79
CCDC39-205ENST00000485055 VWFP04275 2813 aa3.86□□□□□ -1.79
CCDC39-205ENST00000485055 NDUFC2-KCTD14E9PQ53 114 aa3.85□□□□□ -1.79
CCDC39-205ENST00000485055 COX7A2P2O60397 106 aa3.85□□□□□ -1.79
CCDC39-205ENST00000485055 IGLV1-51P01701 117 aa3.85□□□□□ -1.79
CCDC39-205ENST00000485055 IGLV2-14P01704 120 aa3.85□□□□□ -1.79
CCDC39-205ENST00000485055 CRYBB3P26998 211 aa3.85□□□□□ -1.79
CCDC39-205ENST00000485055 AKR1C2P52895 323 aa3.85□□□□□ -1.79
CCDC39-205ENST00000485055 KIAA1644Q3SXP7 199 aa3.85□□□□□ -1.79
CCDC39-205ENST00000485055 C6orf201Q7Z4U5 140 aa3.85□□□□□ -1.79
CCDC39-205ENST00000485055 SLC25A42Q86VD7 318 aa3.85□□□□□ -1.79
CCDC39-205ENST00000485055 TMEM167AQ8TBQ9 72 aa3.85□□□□□ -1.79
CCDC39-205ENST00000485055 SAMD10Q9BYL1 202 aa3.85□□□□□ -1.79
CCDC39-205ENST00000485055 BANF2Q9H503 90 aa3.85□□□□□ -1.79
CCDC39-205ENST00000485055 NBEAL1Q6ZS30 2694 aa3.85□□□□□ -1.79
CCDC39-205ENST00000485055 DNAH7Q8WXX0 4024 aa3.85□□□□□ -1.79
CCDC39-205ENST00000485055 LINC01548A6NM66 108 aa3.85□□□□□ -1.79
CCDC39-205ENST00000485055 UPK2O00526 184 aa3.85□□□□□ -1.79
CCDC39-205ENST00000485055 ZNF253O75346 499 aa3.85□□□□□ -1.79
CCDC39-205ENST00000485055 TMEM241Q24JQ0 296 aa3.85□□□□□ -1.79
CCDC39-205ENST00000485055 UBE2NLQ5JXB2 153 aa3.85□□□□□ -1.79
CCDC39-205ENST00000485055 LCE2AQ5TA79 106 aaPredicted RBP3.85□□□□□ -1.79
CCDC39-205ENST00000485055 OR5C1Q8NGR4 320 aa3.85□□□□□ -1.79
CCDC39-205ENST00000485055 HIST1H4GQ99525 98 aa3.85□□□□□ -1.79
CCDC39-205ENST00000485055 BET1LQ9NYM9 111 aa3.85□□□□□ -1.79
CCDC39-205ENST00000485055 TRBV19A0A075B6N1 114 aa3.84□□□□□ -1.79
CCDC39-205ENST00000485055 CRISP2P16562 243 aa3.84□□□□□ -1.79
CCDC39-205ENST00000485055 CLLU1Q5K131 121 aa3.84□□□□□ -1.79
CCDC39-205ENST00000485055 NR2C2APQ86WQ0 139 aa3.84□□□□□ -1.79
CCDC39-205ENST00000485055 ZNF709Q8N972 641 aa3.84□□□□□ -1.79
CCDC39-205ENST00000485055 ARHGAP5-AS1Q96IT6 56 aa3.84□□□□□ -1.79
CCDC39-205ENST00000485055 CIB3Q96Q77 187 aaPredicted RBP3.84□□□□□ -1.79
CCDC39-205ENST00000485055 COMMD5Q9GZQ3 224 aa3.84□□□□□ -1.79
CCDC39-205ENST00000485055 MED28Q9H204 178 aa3.84□□□□□ -1.79
CCDC39-205ENST00000485055 TXNL4BQ9NX01 149 aaKnown RBP3.84□□□□□ -1.79
CCDC39-205ENST00000485055 IL7P13232 177 aa3.84□□□□□ -1.79
CCDC39-205ENST00000485055 FOXA3P55318 350 aaPredicted RBP3.84□□□□□ -1.79
CCDC39-205ENST00000485055 C10orf99Q6UWK7 81 aa3.84□□□□□ -1.79
CCDC39-205ENST00000485055 ZNF705AQ6ZN79 300 aaPredicted RBP3.84□□□□□ -1.79
CCDC39-205ENST00000485055 KLHL30-AS1Q8NEE0 82 aa3.84□□□□□ -1.79
CCDC39-205ENST00000485055 RBM38Q9H0Z9 239 aaKnown RBP3.84□□□□□ -1.79
CCDC39-205ENST00000485055 CCL28Q9NRJ3 127 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms