RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 F8W1H4 67 aa2.29□□□□□ -2.04
PTCD3-214ENST00000483925 SNCGO76070 127 aa2.29□□□□□ -2.04
PTCD3-214ENST00000483925 FAM74A1Q5RGS3 127 aa2.29□□□□□ -2.04
PTCD3-214ENST00000483925 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.29□□□□□ -2.04
PTCD3-214ENST00000483925 PPDPFLQ8WWR9 84 aa2.29□□□□□ -2.04
PTCD3-214ENST00000483925 LINC00526Q96FQ7 95 aa2.29□□□□□ -2.04
PTCD3-214ENST00000483925 LINC00052Q96N35 136 aa2.29□□□□□ -2.04
PTCD3-214ENST00000483925 ARHGAP32A7KAX9 2087 aa2.29□□□□□ -2.04
PTCD3-214ENST00000483925 COL4A2P08572 1712 aa2.28□□□□□ -2.04
PTCD3-214ENST00000483925 COL24A1Q17RW2 1714 aa2.28□□□□□ -2.04
PTCD3-214ENST00000483925 NRKQ7Z2Y5 1582 aa2.28□□□□□ -2.04
PTCD3-214ENST00000483925 GPR179Q6PRD1 2367 aa2.28□□□□□ -2.04
PTCD3-214ENST00000483925 CACNA1DQ01668 2161 aa2.28□□□□□ -2.04
PTCD3-214ENST00000483925 TRBV6-8A0A0A6YYG3 113 aa2.28□□□□□ -2.04
PTCD3-214ENST00000483925 IGHV3-33P01772 117 aa2.28□□□□□ -2.04
PTCD3-214ENST00000483925 PIRTP0C851 137 aa2.28□□□□□ -2.04
PTCD3-214ENST00000483925 IFITM1P13164 125 aa2.28□□□□□ -2.04
PTCD3-214ENST00000483925 POLR2JP52435 117 aaKnown RBP2.28□□□□□ -2.04
PTCD3-214ENST00000483925 C10orf55Q5SWW7 151 aa2.28□□□□□ -2.04
PTCD3-214ENST00000483925 FP248Q71RG6 208 aaPredicted RBP2.28□□□□□ -2.04
PTCD3-214ENST00000483925 PATE1Q8WXA2 126 aa2.28□□□□□ -2.04
PTCD3-214ENST00000483925 MYH7P12883 1935 aa2.28□□□□□ -2.04
PTCD3-214ENST00000483925 PLXNA3P51805 1871 aa2.28□□□□□ -2.04
PTCD3-214ENST00000483925 ZSWIM8A7E2V4 1837 aa2.28□□□□□ -2.04
PTCD3-214ENST00000483925 ADAMTS7Q9UKP4 1686 aa2.28□□□□□ -2.05
PTCD3-214ENST00000483925 MGAMO43451 1857 aa2.27□□□□□ -2.05
PTCD3-214ENST00000483925 A0A1W2PRS3 328 aa2.27□□□□□ -2.05
PTCD3-214ENST00000483925 H3BRM9 83 aa2.27□□□□□ -2.05
PTCD3-214ENST00000483925 CCL16O15467 120 aa2.27□□□□□ -2.05
PTCD3-214ENST00000483925 Q6ZS92 163 aa2.27□□□□□ -2.05
PTCD3-214ENST00000483925 DAPK1P53355 1430 aa2.26□□□□□ -2.05
PTCD3-214ENST00000483925 QRICH2Q9H0J4 1663 aa2.26□□□□□ -2.05
PTCD3-214ENST00000483925 GYPBP06028 91 aa2.26□□□□□ -2.05
PTCD3-214ENST00000483925 SPINK8P0C7L1 97 aa2.26□□□□□ -2.05
PTCD3-214ENST00000483925 NPC2P61916 151 aa2.26□□□□□ -2.05
PTCD3-214ENST00000483925 RHOHQ15669 191 aa2.26□□□□□ -2.05
PTCD3-214ENST00000483925 NCMAPQ5T1S8 102 aa2.26□□□□□ -2.05
PTCD3-214ENST00000483925 UNQ5815/PRO19632Q6UWF5 114 aa2.26□□□□□ -2.05
PTCD3-214ENST00000483925 LSM10Q969L4 123 aaKnown RBP2.26□□□□□ -2.05
PTCD3-214ENST00000483925 AQP10Q96PS8 301 aa2.26□□□□□ -2.05
PTCD3-214ENST00000483925 ADGRB3O60242 1522 aa2.26□□□□□ -2.05
PTCD3-214ENST00000483925 TRAV17A0A0B4J275 112 aa2.25□□□□□ -2.05
PTCD3-214ENST00000483925 SPRR5A0A1B0GTR4 108 aa2.25□□□□□ -2.05
PTCD3-214ENST00000483925 PVALEFA0A1B0GWK0 134 aa2.25□□□□□ -2.05
PTCD3-214ENST00000483925 LINC00299Q6ZSB3 139 aa2.25□□□□□ -2.05
PTCD3-214ENST00000483925 TTC9CQ8N5M4 171 aa2.25□□□□□ -2.05
PTCD3-214ENST00000483925 TSKUQ8WUA8 353 aa2.25□□□□□ -2.05
PTCD3-214ENST00000483925 TMEM141Q96I45 108 aa2.25□□□□□ -2.05
PTCD3-214ENST00000483925 KLK9Q9UKQ9 250 aa2.25□□□□□ -2.05
PTCD3-214ENST00000483925 RB1CC1Q8TDY2 1594 aa2.24□□□□□ -2.05
PTCD3-214ENST00000483925 FAM24AA6NFZ4 105 aa2.24□□□□□ -2.05
PTCD3-214ENST00000483925 S100A10P60903 97 aa2.24□□□□□ -2.05
PTCD3-214ENST00000483925 COL5A1-AS1Q5SY13 56 aa2.24□□□□□ -2.05
PTCD3-214ENST00000483925 COA5Q86WW8 74 aa2.24□□□□□ -2.05
PTCD3-214ENST00000483925 NDUFA12Q9UI09 145 aa2.24□□□□□ -2.05
PTCD3-214ENST00000483925 ABCC10Q5T3U5 1492 aa2.24□□□□□ -2.05
PTCD3-214ENST00000483925 COL4A5P29400 1685 aa2.24□□□□□ -2.05
PTCD3-214ENST00000483925 TTC37Q6PGP7 1564 aa2.23□□□□□ -2.05
PTCD3-214ENST00000483925 LAMB4A4D0S4 1761 aa2.23□□□□□ -2.05
PTCD3-214ENST00000483925 KIDINS220Q9ULH0 1771 aa2.23□□□□□ -2.05
PTCD3-214ENST00000483925 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.23□□□□□ -2.05
PTCD3-214ENST00000483925 ATG2AQ2TAZ0 1938 aa2.23□□□□□ -2.05
PTCD3-214ENST00000483925 TRBV6-4A0A1B0GX49 114 aa2.23□□□□□ -2.05
PTCD3-214ENST00000483925 TMEM30CPA0ZSE6 113 aa2.23□□□□□ -2.05
PTCD3-214ENST00000483925 A6NIN4 97 aa2.23□□□□□ -2.05
PTCD3-214ENST00000483925 OOSP1A8MZH6 123 aa2.23□□□□□ -2.05
PTCD3-214ENST00000483925 RNASE3P12724 160 aaKnown RBP2.23□□□□□ -2.05
PTCD3-214ENST00000483925 RPL7L1Q6DKI1 246 aaKnown RBP2.23□□□□□ -2.05
PTCD3-214ENST00000483925 SLC48A1Q6P1K1 146 aa2.23□□□□□ -2.05
PTCD3-214ENST00000483925 KIAA2026Q5HYC2 2103 aa2.23□□□□□ -2.05
PTCD3-214ENST00000483925 CECR2Q9BXF3 1484 aa2.22□□□□□ -2.05
PTCD3-214ENST00000483925 SHROOM3Q8TF72 1996 aa2.22□□□□□ -2.05
PTCD3-214ENST00000483925 TANC2Q9HCD6 1990 aa2.22□□□□□ -2.05
PTCD3-214ENST00000483925 TCRBV3S1A0A5B6 114 aa2.22□□□□□ -2.05
PTCD3-214ENST00000483925 NUPR1O60356 82 aa2.22□□□□□ -2.05
PTCD3-214ENST00000483925 KRTAP5-8O75690 187 aa2.22□□□□□ -2.05
PTCD3-214ENST00000483925 PRB2P02812 416 aaPredicted RBP2.22□□□□□ -2.05
PTCD3-214ENST00000483925 ATP5EP56381 51 aaPredicted RBP2.22□□□□□ -2.05
PTCD3-214ENST00000483925 NDUFA11Q86Y39 141 aa2.22□□□□□ -2.05
PTCD3-214ENST00000483925 MYH1P12882 1939 aa2.22□□□□□ -2.05
PTCD3-214ENST00000483925 COL11A1P12107 1806 aaPredicted RBP2.21□□□□□ -2.05
PTCD3-214ENST00000483925 KIF13AQ9H1H9 1805 aa2.21□□□□□ -2.05
PTCD3-214ENST00000483925 LAMB2P55268 1798 aa2.21□□□□□ -2.06
PTCD3-214ENST00000483925 A0A0J9YY99 117 aa2.21□□□□□ -2.06
PTCD3-214ENST00000483925 TMEM262E9PQX1 116 aa2.21□□□□□ -2.06
PTCD3-214ENST00000483925 SLC25A6P12236 298 aa2.21□□□□□ -2.06
PTCD3-214ENST00000483925 IL7P13232 177 aa2.21□□□□□ -2.06
PTCD3-214ENST00000483925 CBLN1P23435 193 aa2.21□□□□□ -2.06
PTCD3-214ENST00000483925 Q8N8P6 123 aa2.21□□□□□ -2.06
PTCD3-214ENST00000483925 C10orf105Q8TEF2 133 aa2.21□□□□□ -2.06
PTCD3-214ENST00000483925 REG4Q9BYZ8 158 aa2.21□□□□□ -2.06
PTCD3-214ENST00000483925 CDC42SE1Q9NRR8 79 aa2.21□□□□□ -2.06
PTCD3-214ENST00000483925 SHANK1Q9Y566 2161 aa2.21□□□□□ -2.06
PTCD3-214ENST00000483925 MYH6P13533 1939 aa2.21□□□□□ -2.06
PTCD3-214ENST00000483925 TRBV10-1A0A0K0K1A3 114 aa2.2□□□□□ -2.06
PTCD3-214ENST00000483925 TRBV6-5A0A0K0K1A5 114 aa2.2□□□□□ -2.06
PTCD3-214ENST00000483925 MPV17LQ2QL34 196 aa2.2□□□□□ -2.06
PTCD3-214ENST00000483925 LYPD5Q6UWN5 251 aa2.2□□□□□ -2.06
PTCD3-214ENST00000483925 DMAC1Q96GE9 116 aa2.2□□□□□ -2.06
PTCD3-214ENST00000483925 SNHG12Q9BXW3 62 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms