RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 PTTG2Q9NZH5 202 aa12.16□□□□□ -0.46
ATG4B-221ENST00000483778 MSRB1Q9NZV6 116 aa12.16□□□□□ -0.46
ATG4B-221ENST00000483778 A0A1W2PPV4 95 aa12.15□□□□□ -0.46
ATG4B-221ENST00000483778 ERVFC1-1P60608 527 aa12.15□□□□□ -0.46
ATG4B-221ENST00000483778 DPPA3Q6W0C5 159 aa12.15□□□□□ -0.46
ATG4B-221ENST00000483778 OR10G9Q8NGN4 311 aa12.15□□□□□ -0.46
ATG4B-221ENST00000483778 OR10G7Q8NGN6 311 aa12.15□□□□□ -0.46
ATG4B-221ENST00000483778 PET100P0DJ07 73 aa12.14□□□□□ -0.47
ATG4B-221ENST00000483778 ARL14EPLP0DKL9 152 aa12.14□□□□□ -0.47
ATG4B-221ENST00000483778 PQLC2Q6ZP29 291 aa12.14□□□□□ -0.47
ATG4B-221ENST00000483778 TRAV9-2A0A087WT02 112 aa12.13□□□□□ -0.47
ATG4B-221ENST00000483778 TRAV21A0A0B4J279 112 aa12.13□□□□□ -0.47
ATG4B-221ENST00000483778 ORM1P02763 201 aa12.13□□□□□ -0.47
ATG4B-221ENST00000483778 GATA1P15976 413 aaPredicted RBP12.13□□□□□ -0.47
ATG4B-221ENST00000483778 NFE4Q86UQ8 179 aa12.13□□□□□ -0.47
ATG4B-221ENST00000483778 PCNPQ8WW12 178 aaKnown RBP12.13□□□□□ -0.47
ATG4B-221ENST00000483778 C9JCJ5 164 aa12.12□□□□□ -0.47
ATG4B-221ENST00000483778 EREGO14944 169 aa12.12□□□□□ -0.47
ATG4B-221ENST00000483778 FAM74A1Q5RGS3 127 aa12.12□□□□□ -0.47
ATG4B-221ENST00000483778 ARL6IP6Q8N6S5 226 aa12.12□□□□□ -0.47
ATG4B-221ENST00000483778 TMEM75Q8N9X5 138 aa12.12□□□□□ -0.47
ATG4B-221ENST00000483778 ALG5Q9Y673 324 aa12.12□□□□□ -0.47
ATG4B-221ENST00000483778 IGHV3-73A0A0B4J1V6 119 aa12.11□□□□□ -0.47
ATG4B-221ENST00000483778 IGLV2-11P01706 119 aa12.11□□□□□ -0.47
ATG4B-221ENST00000483778 CRYGDP07320 174 aa12.11□□□□□ -0.47
ATG4B-221ENST00000483778 EVI2AP22794 236 aa12.11□□□□□ -0.47
ATG4B-221ENST00000483778 Q5BKY6 102 aa12.11□□□□□ -0.47
ATG4B-221ENST00000483778 HSD17B11Q8NBQ5 300 aa12.11□□□□□ -0.47
ATG4B-221ENST00000483778 ASB13Q8WXK3 278 aa12.11□□□□□ -0.47
ATG4B-221ENST00000483778 RAB24Q969Q5 203 aa12.11□□□□□ -0.47
ATG4B-221ENST00000483778 TXNDC17Q9BRA2 123 aa12.11□□□□□ -0.47
ATG4B-221ENST00000483778 SDF2L1Q9HCN8 221 aa12.11□□□□□ -0.47
ATG4B-221ENST00000483778 EPM2AB3EWF7 344 aa12.1□□□□□ -0.47
ATG4B-221ENST00000483778 STAG3L2P0CL84 134 aa12.1□□□□□ -0.47
ATG4B-221ENST00000483778 STAG3L3P0CL85 134 aa12.1□□□□□ -0.47
ATG4B-221ENST00000483778 GCHFRP30047 84 aa12.1□□□□□ -0.47
ATG4B-221ENST00000483778 DEFA1P59665 94 aa12.1□□□□□ -0.47
ATG4B-221ENST00000483778 DEFA3P59666 94 aa12.1□□□□□ -0.47
ATG4B-221ENST00000483778 ZNF876PQ49A33 203 aa12.1□□□□□ -0.47
ATG4B-221ENST00000483778 SLC25A29Q8N8R3 303 aa12.1□□□□□ -0.47
ATG4B-221ENST00000483778 NHLRC2Q8NBF2 726 aa12.1□□□□□ -0.47
ATG4B-221ENST00000483778 SUN5Q8TC36 379 aa12.1□□□□□ -0.47
ATG4B-221ENST00000483778 PGPEP1LA6NFU8 196 aa12.09□□□□□ -0.47
ATG4B-221ENST00000483778 RS1O15537 224 aa12.09□□□□□ -0.47
ATG4B-221ENST00000483778 TCRAP04437 139 aa12.09□□□□□ -0.47
ATG4B-221ENST00000483778 CDC34P49427 236 aaPredicted RBP12.09□□□□□ -0.47
ATG4B-221ENST00000483778 HAMPP81172 84 aa12.09□□□□□ -0.47
ATG4B-221ENST00000483778 CFAP126Q5VTH2 177 aa12.09□□□□□ -0.47
ATG4B-221ENST00000483778 CDPF1Q6NVV7 123 aa12.09□□□□□ -0.47
ATG4B-221ENST00000483778 Q6ZSN1 163 aa12.09□□□□□ -0.47
ATG4B-221ENST00000483778 SH3BGRL3Q9H299 93 aa12.09□□□□□ -0.47
ATG4B-221ENST00000483778 PSG8Q9UQ74 426 aa12.09□□□□□ -0.47
ATG4B-221ENST00000483778 FAT1Q14517 4588 aa12.09□□□□□ -0.47
ATG4B-221ENST00000483778 LRCOL1A6NCL2 159 aa12.08□□□□□ -0.48
ATG4B-221ENST00000483778 ATP6V0CP27449 155 aa12.08□□□□□ -0.48
ATG4B-221ENST00000483778 SUMO1P63165 101 aaKnown RBP12.08□□□□□ -0.48
ATG4B-221ENST00000483778 KCNS1Q96KK3 526 aa12.08□□□□□ -0.48
ATG4B-221ENST00000483778 C9orf85Q96MD7 179 aa12.08□□□□□ -0.48
ATG4B-221ENST00000483778 SRRM2Q9UQ35 2752 aaKnown RBP12.07□□□□□ -0.48
ATG4B-221ENST00000483778 IGHV3-38A0A0C4DH36 116 aa12.07□□□□□ -0.48
ATG4B-221ENST00000483778 GGTLC3B5MD39 225 aa12.07□□□□□ -0.48
ATG4B-221ENST00000483778 GCGP01275 180 aa12.07□□□□□ -0.48
ATG4B-221ENST00000483778 SMR3BP02814 79 aaPredicted RBP12.07□□□□□ -0.48
ATG4B-221ENST00000483778 RNASE3P12724 160 aaKnown RBP12.07□□□□□ -0.48
ATG4B-221ENST00000483778 TIRAPP58753 221 aa12.07□□□□□ -0.48
ATG4B-221ENST00000483778 OR2G3Q8NGZ4 309 aa12.07□□□□□ -0.48
ATG4B-221ENST00000483778 LINC00479Q96M42 142 aa12.07□□□□□ -0.48
ATG4B-221ENST00000483778 Q9UF83 564 aa12.07□□□□□ -0.48
ATG4B-221ENST00000483778 FLG2Q5D862 2391 aaPredicted RBP12.07□□□□□ -0.48
ATG4B-221ENST00000483778 FBLL1A6NHQ2 334 aaKnown RBP12.06□□□□□ -0.48
ATG4B-221ENST00000483778 K7EP13 123 aa12.06□□□□□ -0.48
ATG4B-221ENST00000483778 ZNF506Q5JVG8 444 aa12.06□□□□□ -0.48
ATG4B-221ENST00000483778 PRNTQ86SH4 94 aa12.06□□□□□ -0.48
ATG4B-221ENST00000483778 Q8N3U1 123 aa12.06□□□□□ -0.48
ATG4B-221ENST00000483778 C5orf17Q8NAS9 161 aa12.06□□□□□ -0.48
ATG4B-221ENST00000483778 EPDR1Q9UM22 224 aa12.06□□□□□ -0.48
ATG4B-221ENST00000483778 TRAV34A0A0B4J273 112 aa12.05□□□□□ -0.48
ATG4B-221ENST00000483778 TAAR5O14804 337 aa12.05□□□□□ -0.48
ATG4B-221ENST00000483778 INAFM2P0DMQ5 153 aa12.05□□□□□ -0.48
ATG4B-221ENST00000483778 GCSHP23434 173 aa12.05□□□□□ -0.48
ATG4B-221ENST00000483778 PPT1P50897 306 aa12.05□□□□□ -0.48
ATG4B-221ENST00000483778 AQP10Q96PS8 301 aa12.05□□□□□ -0.48
ATG4B-221ENST00000483778 PSMG3Q9BT73 122 aaPredicted RBP12.05□□□□□ -0.48
ATG4B-221ENST00000483778 IBA57-AS1B1ANH7 110 aa12.04□□□□□ -0.48
ATG4B-221ENST00000483778 IGHV3-30P01768 117 aa12.04□□□□□ -0.48
ATG4B-221ENST00000483778 IGHV3-33P01772 117 aa12.04□□□□□ -0.48
ATG4B-221ENST00000483778 IGHV3-30-3P0DP02 117 aa12.04□□□□□ -0.48
ATG4B-221ENST00000483778 IGHV3-30-5P0DP03 117 aa12.04□□□□□ -0.48
ATG4B-221ENST00000483778 FLI1Q01543 452 aaPredicted RBP12.04□□□□□ -0.48
ATG4B-221ENST00000483778 LINC01556Q5JQF7 62 aa12.04□□□□□ -0.48
ATG4B-221ENST00000483778 Q5VSD8 79 aa12.04□□□□□ -0.48
ATG4B-221ENST00000483778 SH2D6Q7Z4S9 175 aa12.04□□□□□ -0.48
ATG4B-221ENST00000483778 NDFIP1Q9BT67 221 aa12.04□□□□□ -0.48
ATG4B-221ENST00000483778 Q9HAA7 133 aa12.04□□□□□ -0.48
ATG4B-221ENST00000483778 PFN1P07737 140 aaKnown RBP12.03□□□□□ -0.48
ATG4B-221ENST00000483778 ZNF726P1Q15940 193 aa12.03□□□□□ -0.48
ATG4B-221ENST00000483778 C10orf126Q8N4M7 172 aa12.03□□□□□ -0.48
ATG4B-221ENST00000483778 JPT2Q9H910 190 aa12.03□□□□□ -0.48
ATG4B-221ENST00000483778 VPS13BQ7Z7G8 4022 aa12.03□□□□□ -0.48
ATG4B-221ENST00000483778 IGKV3D-20A0A0C4DH25 116 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms