RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 HIGD1AQ9Y241 93 aa0.72□□□□□ -2.29
NSMCE4A-210ENST00000483541 AFDNP55196 1824 aaKnown RBP0.71□□□□□ -2.3
NSMCE4A-210ENST00000483541 KIDINS220Q9ULH0 1771 aa0.71□□□□□ -2.3
NSMCE4A-210ENST00000483541 TPST1O60507 370 aa0.71□□□□□ -2.3
NSMCE4A-210ENST00000483541 IL7P13232 177 aa0.71□□□□□ -2.3
NSMCE4A-210ENST00000483541 ADCYAP1P18509 176 aa0.71□□□□□ -2.3
NSMCE4A-210ENST00000483541 KDELR1P24390 212 aa0.71□□□□□ -2.3
NSMCE4A-210ENST00000483541 FXYD6P3P58550 94 aa0.71□□□□□ -2.3
NSMCE4A-210ENST00000483541 Q5XG85 94 aa0.71□□□□□ -2.3
NSMCE4A-210ENST00000483541 UNQ5815/PRO19632Q6UWF5 114 aa0.71□□□□□ -2.3
NSMCE4A-210ENST00000483541 LZICQ8WZA0 190 aa0.71□□□□□ -2.3
NSMCE4A-210ENST00000483541 CDK12Q9NYV4 1490 aaPredicted RBP0.71□□□□□ -2.3
NSMCE4A-210ENST00000483541 ARHGAP31Q2M1Z3 1444 aa0.71□□□□□ -2.3
NSMCE4A-210ENST00000483541 A0A0G2JMM0 328 aa0.7□□□□□ -2.3
NSMCE4A-210ENST00000483541 A0A1B0GW64 132 aa0.7□□□□□ -2.3
NSMCE4A-210ENST00000483541 IGF2P01344 180 aa0.7□□□□□ -2.3
NSMCE4A-210ENST00000483541 RBP4P02753 201 aa0.7□□□□□ -2.3
NSMCE4A-210ENST00000483541 SPINT3P49223 89 aa0.7□□□□□ -2.3
NSMCE4A-210ENST00000483541 CAV3P56539 151 aa0.7□□□□□ -2.3
NSMCE4A-210ENST00000483541 PLGLB1Q02325 96 aa0.7□□□□□ -2.3
NSMCE4A-210ENST00000483541 RHOHQ15669 191 aa0.7□□□□□ -2.3
NSMCE4A-210ENST00000483541 TMEM244Q5VVB8 128 aa0.7□□□□□ -2.3
NSMCE4A-210ENST00000483541 XAF1Q6GPH4 301 aa0.7□□□□□ -2.3
NSMCE4A-210ENST00000483541 DMAC1Q96GE9 116 aa0.7□□□□□ -2.3
NSMCE4A-210ENST00000483541 MRPL35Q9NZE8 188 aaKnown RBP0.7□□□□□ -2.3
NSMCE4A-210ENST00000483541 MRPL36Q9P0J6 103 aaKnown RBP0.7□□□□□ -2.3
NSMCE4A-210ENST00000483541 LRP5O75197 1615 aa0.7□□□□□ -2.3
NSMCE4A-210ENST00000483541 PTPRGP23470 1445 aa0.7□□□□□ -2.3
NSMCE4A-210ENST00000483541 ESPL1Q14674 2120 aa0.7□□□□□ -2.3
NSMCE4A-210ENST00000483541 MYH13Q9UKX3 1938 aa0.7□□□□□ -2.3
NSMCE4A-210ENST00000483541 CDK5RAP2Q96SN8 1893 aa0.69□□□□□ -2.3
NSMCE4A-210ENST00000483541 K7EIL1 84 aa0.69□□□□□ -2.3
NSMCE4A-210ENST00000483541 IGKCP01834 107 aa0.69□□□□□ -2.3
NSMCE4A-210ENST00000483541 HLA-DRB4P13762 266 aa0.69□□□□□ -2.3
NSMCE4A-210ENST00000483541 EVI2AP22794 236 aa0.69□□□□□ -2.3
NSMCE4A-210ENST00000483541 POLR2JP52435 117 aaKnown RBP0.69□□□□□ -2.3
NSMCE4A-210ENST00000483541 IQCJQ1A5X6 159 aa0.69□□□□□ -2.3
NSMCE4A-210ENST00000483541 MORN2Q502X0 79 aa0.69□□□□□ -2.3
NSMCE4A-210ENST00000483541 SPINK9Q5DT21 86 aa0.69□□□□□ -2.3
NSMCE4A-210ENST00000483541 LYPD5Q6UWN5 251 aa0.69□□□□□ -2.3
NSMCE4A-210ENST00000483541 TMEM91Q6ZNR0 172 aa0.69□□□□□ -2.3
NSMCE4A-210ENST00000483541 ATOH7Q8N100 152 aa0.69□□□□□ -2.3
NSMCE4A-210ENST00000483541 GSKIPQ9P0R6 139 aa0.69□□□□□ -2.3
NSMCE4A-210ENST00000483541 COMMD3Q9UBI1 195 aa0.69□□□□□ -2.3
NSMCE4A-210ENST00000483541 HLA-DRB4X5D2U9 266 aa0.69□□□□□ -2.3
NSMCE4A-210ENST00000483541 DLEC1Q9Y238 1755 aa0.69□□□□□ -2.3
NSMCE4A-210ENST00000483541 FBN2P35556 2912 aa0.69□□□□□ -2.3
NSMCE4A-210ENST00000483541 CEP152O94986 1710 aa0.69□□□□□ -2.3
NSMCE4A-210ENST00000483541 PLXNA2O75051 1894 aa0.69□□□□□ -2.3
NSMCE4A-210ENST00000483541 ARHGEF10O15013 1369 aa0.69□□□□□ -2.3
NSMCE4A-210ENST00000483541 RREB1Q92766 1687 aa0.69□□□□□ -2.3
NSMCE4A-210ENST00000483541 TRAV17A0A0B4J275 112 aa0.68□□□□□ -2.3
NSMCE4A-210ENST00000483541 HIGD1CA8MV81 97 aa0.68□□□□□ -2.3
NSMCE4A-210ENST00000483541 FHAD1B1AJZ9 1412 aa0.68□□□□□ -2.3
NSMCE4A-210ENST00000483541 YPEL1O60688 119 aa0.68□□□□□ -2.3
NSMCE4A-210ENST00000483541 CD3DP04234 171 aa0.68□□□□□ -2.3
NSMCE4A-210ENST00000483541 ATG5Q9H1Y0 275 aa0.68□□□□□ -2.3
NSMCE4A-210ENST00000483541 TAS2R8Q9NYW2 309 aa0.68□□□□□ -2.3
NSMCE4A-210ENST00000483541 CCDC171Q6TFL3 1326 aa0.67□□□□□ -2.3
NSMCE4A-210ENST00000483541 FXYD1O00168 92 aa0.67□□□□□ -2.3
NSMCE4A-210ENST00000483541 AKR1D1P51857 326 aa0.67□□□□□ -2.3
NSMCE4A-210ENST00000483541 FXYD3Q14802 87 aa0.67□□□□□ -2.3
NSMCE4A-210ENST00000483541 SNX29P2Q8IUI4 249 aa0.67□□□□□ -2.3
NSMCE4A-210ENST00000483541 DNAJC15Q9Y5T4 150 aa0.67□□□□□ -2.3
NSMCE4A-210ENST00000483541 ABCA1O95477 2261 aa0.67□□□□□ -2.3
NSMCE4A-210ENST00000483541 UHRF1BP1LA0JNW5 1464 aa0.67□□□□□ -2.3
NSMCE4A-210ENST00000483541 OVOS2A0A0J9YW53 1432 aa0.66□□□□□ -2.3
NSMCE4A-210ENST00000483541 OVOS2Q6IE36 1432 aa0.66□□□□□ -2.3
NSMCE4A-210ENST00000483541 ABCA4P78363 2273 aa0.66□□□□□ -2.3
NSMCE4A-210ENST00000483541 TRBV10-1A0A0K0K1A3 114 aa0.66□□□□□ -2.3
NSMCE4A-210ENST00000483541 LOC101927531A0A1B0GV80 90 aa0.66□□□□□ -2.3
NSMCE4A-210ENST00000483541 ARPC5O15511 151 aa0.66□□□□□ -2.3
NSMCE4A-210ENST00000483541 ZNF137PP52743 207 aa0.66□□□□□ -2.3
NSMCE4A-210ENST00000483541 ALX1Q15699 326 aa0.66□□□□□ -2.3
NSMCE4A-210ENST00000483541 CLLU1Q5K131 121 aa0.66□□□□□ -2.3
NSMCE4A-210ENST00000483541 GLYATL3Q5SZD4 288 aa0.66□□□□□ -2.3
NSMCE4A-210ENST00000483541 C6orf52Q5T4I8 152 aa0.66□□□□□ -2.3
NSMCE4A-210ENST00000483541 C10orf99Q6UWK7 81 aa0.66□□□□□ -2.3
NSMCE4A-210ENST00000483541 MMGT1Q8N4V1 131 aa0.66□□□□□ -2.3
NSMCE4A-210ENST00000483541 PPDPFLQ8WWR9 84 aa0.66□□□□□ -2.3
NSMCE4A-210ENST00000483541 VPS25Q9BRG1 176 aa0.66□□□□□ -2.3
NSMCE4A-210ENST00000483541 NOP16Q9Y3C1 178 aaKnown RBP0.66□□□□□ -2.3
NSMCE4A-210ENST00000483541 KIAA0100Q14667 2235 aaKnown RBP0.66□□□□□ -2.3
NSMCE4A-210ENST00000483541 ZCCHC6Q5VYS8 1495 aaKnown RBP0.66□□□□□ -2.3
NSMCE4A-210ENST00000483541 LOC285556D6RIA3 1793 aa0.65□□□□□ -2.3
NSMCE4A-210ENST00000483541 TRAV2A0A0B4J234 112 aa0.65□□□□□ -2.31
NSMCE4A-210ENST00000483541 NBDYA0A0U1RRE5 68 aa0.65□□□□□ -2.31
NSMCE4A-210ENST00000483541 APOC1P02654 83 aa0.65□□□□□ -2.31
NSMCE4A-210ENST00000483541 PRB4P10163 310 aaPredicted RBP0.65□□□□□ -2.31
NSMCE4A-210ENST00000483541 CKS1BP61024 79 aa0.65□□□□□ -2.31
NSMCE4A-210ENST00000483541 NCS1P62166 190 aa0.65□□□□□ -2.31
NSMCE4A-210ENST00000483541 SPINK13Q1W4C9 94 aa0.65□□□□□ -2.31
NSMCE4A-210ENST00000483541 SLC25A26Q70HW3 274 aa0.65□□□□□ -2.31
NSMCE4A-210ENST00000483541 DEFB132Q7Z7B7 95 aa0.65□□□□□ -2.31
NSMCE4A-210ENST00000483541 ATP6V0E2Q8NHE4 81 aa0.65□□□□□ -2.31
NSMCE4A-210ENST00000483541 PLAC4Q8WY50 150 aa0.65□□□□□ -2.31
NSMCE4A-210ENST00000483541 NAV3Q8IVL0 2385 aa0.65□□□□□ -2.31
NSMCE4A-210ENST00000483541 MYH6P13533 1939 aa0.65□□□□□ -2.31
NSMCE4A-210ENST00000483541 BLMP54132 1417 aaPredicted RBP0.64□□□□□ -2.31
NSMCE4A-210ENST00000483541 J3QLW9 94 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms