RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 KIR2DL5BA0A0G2JN68 375 aa5.88□□□□□ -1.47
SNX13-208ENST00000482558 KIR2DL5BA0A0G2JPC4 375 aa5.88□□□□□ -1.47
SNX13-208ENST00000482558 F2Z2F3 143 aa5.88□□□□□ -1.47
SNX13-208ENST00000482558 NDUFA4O00483 81 aa5.88□□□□□ -1.47
SNX13-208ENST00000482558 NUPR1O60356 82 aa5.88□□□□□ -1.47
SNX13-208ENST00000482558 IGHG2P01859 326 aa5.88□□□□□ -1.47
SNX13-208ENST00000482558 IGHV4-30-4P0DP06 118 aa5.88□□□□□ -1.47
SNX13-208ENST00000482558 SRSF9Q13242 221 aaKnown RBP eCLIP5.88□□□□□ -1.47
SNX13-208ENST00000482558 TCF24Q7RTU0 167 aa5.88□□□□□ -1.47
SNX13-208ENST00000482558 KIR2DL5AQ8N109 375 aa5.88□□□□□ -1.47
SNX13-208ENST00000482558 LINC01561Q8N1V8 128 aa5.88□□□□□ -1.47
SNX13-208ENST00000482558 PGLYRP4Q96LB8 373 aa5.88□□□□□ -1.47
SNX13-208ENST00000482558 VAMP8Q9BV40 100 aa5.88□□□□□ -1.47
SNX13-208ENST00000482558 NCOR2Q9Y618 2525 aa5.87□□□□□ -1.47
SNX13-208ENST00000482558 TRAV8-1A0A0A6YYK1 113 aa5.87□□□□□ -1.47
SNX13-208ENST00000482558 A6NDX4 124 aa5.87□□□□□ -1.47
SNX13-208ENST00000482558 FABP5P3A8MUU1 101 aa5.87□□□□□ -1.47
SNX13-208ENST00000482558 M0R2Z0 102 aa5.87□□□□□ -1.47
SNX13-208ENST00000482558 SNRPCP09234 159 aaKnown RBP5.87□□□□□ -1.47
SNX13-208ENST00000482558 NHLRC4P0CG21 123 aaPredicted RBP5.87□□□□□ -1.47
SNX13-208ENST00000482558 HIST1H1AQ02539 215 aaPredicted RBP5.87□□□□□ -1.47
SNX13-208ENST00000482558 KIAA1644Q3SXP7 199 aa5.87□□□□□ -1.47
SNX13-208ENST00000482558 LCN12Q6JVE5 192 aa5.87□□□□□ -1.47
SNX13-208ENST00000482558 CLEC19AQ6UXS0 136 aa5.87□□□□□ -1.47
SNX13-208ENST00000482558 LINC00322Q6ZN03 302 aaPredicted RBP5.87□□□□□ -1.47
SNX13-208ENST00000482558 C9orf139Q6ZV77 190 aa5.87□□□□□ -1.47
SNX13-208ENST00000482558 C17orf77Q96MU5 243 aa5.87□□□□□ -1.47
SNX13-208ENST00000482558 ABCA1O95477 2261 aa5.87□□□□□ -1.47
SNX13-208ENST00000482558 CACNA1BQ00975 2339 aa5.87□□□□□ -1.47
SNX13-208ENST00000482558 ARHGAP32A7KAX9 2087 aa5.86□□□□□ -1.47
SNX13-208ENST00000482558 TRAV40A0A0B4J280 105 aa5.86□□□□□ -1.47
SNX13-208ENST00000482558 TRBV7-9A0A0J9YWB2 115 aa5.86□□□□□ -1.47
SNX13-208ENST00000482558 CDK2AP2O75956 126 aa5.86□□□□□ -1.47
SNX13-208ENST00000482558 PPBPP02775 128 aa5.86□□□□□ -1.47
SNX13-208ENST00000482558 TRGV3P03979 118 aa5.86□□□□□ -1.47
SNX13-208ENST00000482558 FRMD6-AS1P0C7T7 363 aa5.86□□□□□ -1.47
SNX13-208ENST00000482558 LINC00614P0C842 121 aa5.86□□□□□ -1.47
SNX13-208ENST00000482558 COX6B1P14854 86 aa5.86□□□□□ -1.47
SNX13-208ENST00000482558 KRTDAPP60985 99 aa5.86□□□□□ -1.47
SNX13-208ENST00000482558 FAM106AQ4KMX7 169 aa5.86□□□□□ -1.47
SNX13-208ENST00000482558 GDF5OSQ5U4N7 250 aa5.86□□□□□ -1.47
SNX13-208ENST00000482558 NIT1Q86X76 327 aa5.86□□□□□ -1.47
SNX13-208ENST00000482558 TEX29Q8N6K0 151 aa5.86□□□□□ -1.47
SNX13-208ENST00000482558 PIFOQ8TCI5 191 aa5.86□□□□□ -1.47
SNX13-208ENST00000482558 C14orf144Q96I85 54 aa5.86□□□□□ -1.47
SNX13-208ENST00000482558 MIEN1Q9BRT3 115 aa5.86□□□□□ -1.47
SNX13-208ENST00000482558 PRO1933Q9H354 126 aa5.86□□□□□ -1.47
SNX13-208ENST00000482558 HSPB8Q9UJY1 196 aa5.86□□□□□ -1.47
SNX13-208ENST00000482558 LAMTOR2Q9Y2Q5 125 aa5.86□□□□□ -1.47
SNX13-208ENST00000482558 SMAD5-AS1Q9Y6J3 95 aa5.86□□□□□ -1.47
SNX13-208ENST00000482558 WNK2Q9Y3S1 2297 aa5.86□□□□□ -1.47
SNX13-208ENST00000482558 LINC01548A6NM66 108 aa5.85□□□□□ -1.47
SNX13-208ENST00000482558 G3V318 75 aa5.85□□□□□ -1.47
SNX13-208ENST00000482558 M0R3E3 92 aa5.85□□□□□ -1.47
SNX13-208ENST00000482558 OVOL1O14753 267 aa5.85□□□□□ -1.47
SNX13-208ENST00000482558 CRXO43186 299 aaPredicted RBP5.85□□□□□ -1.47
SNX13-208ENST00000482558 SH2D1AO60880 128 aa5.85□□□□□ -1.47
SNX13-208ENST00000482558 IGHV3-23P01764 117 aa5.85□□□□□ -1.47
SNX13-208ENST00000482558 CTRLP40313 264 aa5.85□□□□□ -1.47
SNX13-208ENST00000482558 PSMG4Q5JS54 123 aa5.85□□□□□ -1.47
SNX13-208ENST00000482558 TMEM78Q5T7P6 136 aa5.85□□□□□ -1.47
SNX13-208ENST00000482558 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.85□□□□□ -1.47
SNX13-208ENST00000482558 C9orf47Q6ZRZ4 202 aa5.85□□□□□ -1.47
SNX13-208ENST00000482558 ZNF738Q8NE65 137 aa5.85□□□□□ -1.47
SNX13-208ENST00000482558 LINC00477Q96M19 166 aa5.85□□□□□ -1.47
SNX13-208ENST00000482558 RCHY1Q96PM5 261 aa5.85□□□□□ -1.47
SNX13-208ENST00000482558 C2orf88Q9BSF0 95 aa5.85□□□□□ -1.47
SNX13-208ENST00000482558 CNFNQ9BYD5 112 aa5.85□□□□□ -1.47
SNX13-208ENST00000482558 S4R3C0 116 aa5.85□□□□□ -1.47
SNX13-208ENST00000482558 KALRNO60229 2985 aa5.85□□□□□ -1.47
SNX13-208ENST00000482558 IGHV4-30-2A0A087WSY4 118 aa5.84□□□□□ -1.47
SNX13-208ENST00000482558 CLPSL1A2RUU4 121 aa5.84□□□□□ -1.47
SNX13-208ENST00000482558 K7EMT4 169 aa5.84□□□□□ -1.47
SNX13-208ENST00000482558 M0QXV9 152 aa5.84□□□□□ -1.47
SNX13-208ENST00000482558 M0R143 59 aa5.84□□□□□ -1.47
SNX13-208ENST00000482558 C3orf79P0CE67 100 aa5.84□□□□□ -1.47
SNX13-208ENST00000482558 NTF3P20783 257 aa5.84□□□□□ -1.47
SNX13-208ENST00000482558 CRIP1P50238 77 aa5.84□□□□□ -1.47
SNX13-208ENST00000482558 ZNF138P52744 262 aa5.84□□□□□ -1.47
SNX13-208ENST00000482558 XGP55808 180 aa5.84□□□□□ -1.47
SNX13-208ENST00000482558 LAGE3Q14657 143 aa5.84□□□□□ -1.47
SNX13-208ENST00000482558 FAM104BQ5XKR9 115 aa5.84□□□□□ -1.47
SNX13-208ENST00000482558 SMIM15Q7Z3B0 74 aa5.84□□□□□ -1.47
SNX13-208ENST00000482558 FER1L6-AS1Q8NA97 138 aa5.84□□□□□ -1.47
SNX13-208ENST00000482558 BAALCQ8WXS3 180 aa5.84□□□□□ -1.47
SNX13-208ENST00000482558 TMEM70Q9BUB7 260 aa5.84□□□□□ -1.47
SNX13-208ENST00000482558 Q9HAA7 133 aa5.84□□□□□ -1.47
SNX13-208ENST00000482558 U3KQK5 164 aa5.84□□□□□ -1.47
SNX13-208ENST00000482558 DOPEY1Q5JWR5 2465 aa5.84□□□□□ -1.48
SNX13-208ENST00000482558 IGKV2-40A0A087WW87 121 aaPredicted RBP5.83□□□□□ -1.48
SNX13-208ENST00000482558 H3BUX3 64 aa5.83□□□□□ -1.48
SNX13-208ENST00000482558 LEPROTL1O95214 131 aa5.83□□□□□ -1.48
SNX13-208ENST00000482558 IGKV2D-40P01614 121 aaPredicted RBP5.83□□□□□ -1.48
SNX13-208ENST00000482558 ARMS2P0C7Q2 107 aa5.83□□□□□ -1.48
SNX13-208ENST00000482558 IGLC6P0CF74 106 aa5.83□□□□□ -1.48
SNX13-208ENST00000482558 PROK1P58294 105 aa5.83□□□□□ -1.48
SNX13-208ENST00000482558 CACNG7P62955 275 aa5.83□□□□□ -1.48
SNX13-208ENST00000482558 LOXL1Q08397 574 aaPredicted RBP5.83□□□□□ -1.48
SNX13-208ENST00000482558 LYZL1Q6UWQ5 148 aa5.83□□□□□ -1.48
SNX13-208ENST00000482558 LINC00336Q6ZUF6 198 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms