RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 ABCA8O94911 1581 aa2.68□□□□□ -1.98
VPS41-212ENST00000482217 KDM3BQ7LBC6 1761 aa2.68□□□□□ -1.98
VPS41-212ENST00000482217 UBR1Q8IWV7 1749 aa2.68□□□□□ -1.98
VPS41-212ENST00000482217 TOP2BQ02880 1626 aa2.68□□□□□ -1.98
VPS41-212ENST00000482217 SHROOM2Q13796 1616 aa2.68□□□□□ -1.98
VPS41-212ENST00000482217 KIF14Q15058 1648 aa2.68□□□□□ -1.98
VPS41-212ENST00000482217 PREX2Q70Z35 1606 aa2.68□□□□□ -1.98
VPS41-212ENST00000482217 BIVM-ERCC5R4GMW8 1640 aa2.68□□□□□ -1.98
VPS41-212ENST00000482217 CUX1P39880 1505 aa2.68□□□□□ -1.98
VPS41-212ENST00000482217 TANC1Q9C0D5 1861 aa2.67□□□□□ -1.98
VPS41-212ENST00000482217 LAMB4A4D0S4 1761 aa2.67□□□□□ -1.98
VPS41-212ENST00000482217 MUC22E2RYF6 1773 aaPredicted RBP2.67□□□□□ -1.98
VPS41-212ENST00000482217 ARFGEF2Q9Y6D5 1785 aa2.67□□□□□ -1.98
VPS41-212ENST00000482217 GOLGA3Q08378 1498 aa2.67□□□□□ -1.98
VPS41-212ENST00000482217 IGKV1D-17A0A075B6S4 117 aa2.67□□□□□ -1.98
VPS41-212ENST00000482217 IGHV3-73A0A0B4J1V6 119 aa2.67□□□□□ -1.98
VPS41-212ENST00000482217 LOC107984156A0A0G2JMH3 177 aa2.67□□□□□ -1.98
VPS41-212ENST00000482217 UBE2L5PA0A1B0GUS4 154 aa2.67□□□□□ -1.98
VPS41-212ENST00000482217 J3QLW9 94 aa2.67□□□□□ -1.98
VPS41-212ENST00000482217 PIRTP0C851 137 aa2.67□□□□□ -1.98
VPS41-212ENST00000482217 NFYAP23511 347 aaPredicted RBP2.67□□□□□ -1.98
VPS41-212ENST00000482217 UBE2L3P68036 154 aaKnown RBP2.67□□□□□ -1.98
VPS41-212ENST00000482217 WFDC2Q14508 124 aa2.67□□□□□ -1.98
VPS41-212ENST00000482217 ADIRFQ15847 76 aa2.67□□□□□ -1.98
VPS41-212ENST00000482217 ETDBQ3ZM63 59 aa2.67□□□□□ -1.98
VPS41-212ENST00000482217 C1orf134Q5TEV5 83 aa2.67□□□□□ -1.98
VPS41-212ENST00000482217 Q6ZR54 194 aa2.67□□□□□ -1.98
VPS41-212ENST00000482217 SLC25A26Q70HW3 274 aa2.67□□□□□ -1.98
VPS41-212ENST00000482217 ARL17AQ8IVW1 177 aa2.67□□□□□ -1.98
VPS41-212ENST00000482217 OR10AG1Q8NH19 301 aa2.67□□□□□ -1.98
VPS41-212ENST00000482217 RHOXF1Q8NHV9 184 aa2.67□□□□□ -1.98
VPS41-212ENST00000482217 CST11Q9H112 138 aa2.67□□□□□ -1.98
VPS41-212ENST00000482217 CXCL16Q9H2A7 254 aa2.67□□□□□ -1.98
VPS41-212ENST00000482217 RPS10P5Q9NQ39 176 aa2.67□□□□□ -1.98
VPS41-212ENST00000482217 TARBP1Q13395 1621 aaKnown RBP2.67□□□□□ -1.98
VPS41-212ENST00000482217 DISP1Q96F81 1524 aa2.67□□□□□ -1.98
VPS41-212ENST00000482217 CPAMD8Q8IZJ3 1885 aa2.67□□□□□ -1.98
VPS41-212ENST00000482217 MED12LQ86YW9 2145 aa2.66□□□□□ -1.98
VPS41-212ENST00000482217 COL24A1Q17RW2 1714 aa2.66□□□□□ -1.98
VPS41-212ENST00000482217 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.66□□□□□ -1.98
VPS41-212ENST00000482217 TRAV14DV4A0A0A6YYC5 116 aa2.66□□□□□ -1.98
VPS41-212ENST00000482217 IGHV3-15A0A0B4J1V0 119 aa2.66□□□□□ -1.98
VPS41-212ENST00000482217 IGHV1-24A0A0C4DH33 117 aa2.66□□□□□ -1.98
VPS41-212ENST00000482217 A0A1W2PPM0 123 aa2.66□□□□□ -1.98
VPS41-212ENST00000482217 IBA57-AS1B1ANH7 110 aa2.66□□□□□ -1.98
VPS41-212ENST00000482217 DNAH10OSP0CZ25 163 aa2.66□□□□□ -1.98
VPS41-212ENST00000482217 XCL1P47992 114 aa2.66□□□□□ -1.98
VPS41-212ENST00000482217 NOVP48745 357 aa2.66□□□□□ -1.98
VPS41-212ENST00000482217 IL17AQ16552 155 aa2.66□□□□□ -1.98
VPS41-212ENST00000482217 KRTAP5-4Q6L8H1 288 aa2.66□□□□□ -1.98
VPS41-212ENST00000482217 SH2D6Q7Z4S9 175 aa2.66□□□□□ -1.98
VPS41-212ENST00000482217 TYMSOSQ8TAI1 123 aa2.66□□□□□ -1.98
VPS41-212ENST00000482217 MUC7Q8TAX7 377 aa2.66□□□□□ -1.98
VPS41-212ENST00000482217 PPDPFLQ8WWR9 84 aa2.66□□□□□ -1.98
VPS41-212ENST00000482217 ZNRD1Q9P1U0 126 aa2.66□□□□□ -1.98
VPS41-212ENST00000482217 PRDM15P57071 1507 aaPredicted RBP2.66□□□□□ -1.98
VPS41-212ENST00000482217 URB2Q14146 1524 aaKnown RBP2.66□□□□□ -1.98
VPS41-212ENST00000482217 PRXQ9BXM0 1461 aa2.65□□□□□ -1.98
VPS41-212ENST00000482217 PLIN4Q96Q06 1357 aa2.65□□□□□ -1.98
VPS41-212ENST00000482217 ARHGEF12Q9NZN5 1544 aa2.65□□□□□ -1.99
VPS41-212ENST00000482217 M0R233 179 aa2.65□□□□□ -1.99
VPS41-212ENST00000482217 SIX6O95475 246 aa2.65□□□□□ -1.99
VPS41-212ENST00000482217 CCKP06307 115 aa2.65□□□□□ -1.99
VPS41-212ENST00000482217 PRB4P10163 310 aaPredicted RBP2.65□□□□□ -1.99
VPS41-212ENST00000482217 ROMO1P60602 79 aa2.65□□□□□ -1.99
VPS41-212ENST00000482217 SEC11AP67812 179 aa2.65□□□□□ -1.99
VPS41-212ENST00000482217 ZNF816Q0VGE8 651 aaPredicted RBP2.65□□□□□ -1.99
VPS41-212ENST00000482217 FAM27BQ5VT28 67 aa2.65□□□□□ -1.99
VPS41-212ENST00000482217 Q6ZR03 302 aa2.65□□□□□ -1.99
VPS41-212ENST00000482217 SMDT1Q9H4I9 107 aa2.65□□□□□ -1.99
VPS41-212ENST00000482217 CACFD1Q9UGQ2 172 aa2.65□□□□□ -1.99
VPS41-212ENST00000482217 SMAD5-AS1Q9Y6J3 95 aa2.65□□□□□ -1.99
VPS41-212ENST00000482217 ITSN1Q15811 1721 aa2.65□□□□□ -1.99
VPS41-212ENST00000482217 MGAMO43451 1857 aa2.65□□□□□ -1.99
VPS41-212ENST00000482217 SHANK2Q9UPX8 1470 aa2.65□□□□□ -1.99
VPS41-212ENST00000482217 CDK13Q14004 1512 aaKnown RBP2.64□□□□□ -1.99
VPS41-212ENST00000482217 BTAF1O14981 1849 aa2.64□□□□□ -1.99
VPS41-212ENST00000482217 MUC21A0A140T8X8 626 aa2.64□□□□□ -1.99
VPS41-212ENST00000482217 hDV103S1A0JD37 113 aa2.64□□□□□ -1.99
VPS41-212ENST00000482217 TMEM235A6NFC5 223 aa2.64□□□□□ -1.99
VPS41-212ENST00000482217 C5orf67F2Z3F1 127 aa2.64□□□□□ -1.99
VPS41-212ENST00000482217 CPSF4O95639 269 aaKnown RBP2.64□□□□□ -1.99
VPS41-212ENST00000482217 LHBP01229 141 aa2.64□□□□□ -1.99
VPS41-212ENST00000482217 MSMBP08118 114 aa2.64□□□□□ -1.99
VPS41-212ENST00000482217 RPS10P46783 165 aaKnown RBP2.64□□□□□ -1.99
VPS41-212ENST00000482217 ATP5EP56381 51 aaPredicted RBP2.64□□□□□ -1.99
VPS41-212ENST00000482217 ZNF117Q03924 483 aa2.64□□□□□ -1.99
VPS41-212ENST00000482217 RHOHQ15669 191 aa2.64□□□□□ -1.99
VPS41-212ENST00000482217 LGALSLQ3ZCW2 172 aaPredicted RBP2.64□□□□□ -1.99
VPS41-212ENST00000482217 SPATA45Q537H7 98 aa2.64□□□□□ -1.99
VPS41-212ENST00000482217 NMSQ5H8A3 153 aa2.64□□□□□ -1.99
VPS41-212ENST00000482217 Q6ZQT0 140 aa2.64□□□□□ -1.99
VPS41-212ENST00000482217 DYNAPQ8N1N2 210 aa2.64□□□□□ -1.99
VPS41-212ENST00000482217 C15orf53Q8NAA6 179 aa2.64□□□□□ -1.99
VPS41-212ENST00000482217 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
VPS41-212ENST00000482217 CYTL1Q9NRR1 136 aa2.64□□□□□ -1.99
VPS41-212ENST00000482217 ZNF355PQ9NSJ1 428 aa2.64□□□□□ -1.99
VPS41-212ENST00000482217 NDUFB11Q9NX14 153 aa2.64□□□□□ -1.99
VPS41-212ENST00000482217 PRO0461Q9UI25 63 aa2.64□□□□□ -1.99
VPS41-212ENST00000482217 ZNF318Q5VUA4 2279 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms