RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 MED14OSP0DP75 135 aa11.86□□□□□ -0.51
RXRA-202ENST00000481739 SMIM15Q7Z3B0 74 aa11.86□□□□□ -0.51
RXRA-202ENST00000481739 ZNF664Q8N3J9 261 aa11.86□□□□□ -0.51
RXRA-202ENST00000481739 C11orf44Q8N8P7 122 aa11.86□□□□□ -0.51
RXRA-202ENST00000481739 MS4A6AQ9H2W1 248 aa11.86□□□□□ -0.51
RXRA-202ENST00000481739 C11orf21Q9P2W6 132 aa11.86□□□□□ -0.51
RXRA-202ENST00000481739 NIPBLQ6KC79 2804 aaeCLIP11.85□□□□□ -0.51
RXRA-202ENST00000481739 C2orf70A6NJV1 201 aa11.85□□□□□ -0.51
RXRA-202ENST00000481739 LINC01619G3V211 115 aa11.85□□□□□ -0.51
RXRA-202ENST00000481739 TCTEX1D4Q5JR98 221 aa11.85□□□□□ -0.51
RXRA-202ENST00000481739 HIST2H2BDQ6DRA6 164 aa11.85□□□□□ -0.51
RXRA-202ENST00000481739 AMN1Q8IY45 258 aa11.85□□□□□ -0.51
RXRA-202ENST00000481739 AP5S1Q9NUS5 200 aa11.85□□□□□ -0.51
RXRA-202ENST00000481739 PEMTQ9UBM1 199 aa11.85□□□□□ -0.51
RXRA-202ENST00000481739 RNF114Q9Y508 228 aa11.85□□□□□ -0.51
RXRA-202ENST00000481739 IGKV3-7A0A075B6H7 116 aa11.84□□□□□ -0.51
RXRA-202ENST00000481739 D6R8Y8 96 aa11.84□□□□□ -0.51
RXRA-202ENST00000481739 K7EQG2 157 aa11.84□□□□□ -0.51
RXRA-202ENST00000481739 DDTP30046 118 aa11.84□□□□□ -0.51
RXRA-202ENST00000481739 C18orf65Q6ZTR6 163 aa11.84□□□□□ -0.51
RXRA-202ENST00000481739 PRELID3AQ96N28 172 aa11.84□□□□□ -0.51
RXRA-202ENST00000481739 KIR2DL5BA0A0G2JN68 375 aa11.83□□□□□ -0.51
RXRA-202ENST00000481739 KIR2DL5BA0A0G2JPC4 375 aa11.83□□□□□ -0.51
RXRA-202ENST00000481739 C3orf79P0CE67 100 aa11.83□□□□□ -0.51
RXRA-202ENST00000481739 BTF3P20290 206 aaKnown RBP11.83□□□□□ -0.51
RXRA-202ENST00000481739 MRPL51Q4U2R6 128 aaKnown RBP11.83□□□□□ -0.51
RXRA-202ENST00000481739 FA2HQ7L5A8 372 aa11.83□□□□□ -0.51
RXRA-202ENST00000481739 KIR2DL5AQ8N109 375 aa11.83□□□□□ -0.51
RXRA-202ENST00000481739 TRAV2A0A0B4J234 112 aa11.83□□□□□ -0.52
RXRA-202ENST00000481739 IGHV1-24A0A0C4DH33 117 aa11.83□□□□□ -0.52
RXRA-202ENST00000481739 KLLNB2CW77 178 aa11.83□□□□□ -0.52
RXRA-202ENST00000481739 CD28P10747 220 aa11.83□□□□□ -0.52
RXRA-202ENST00000481739 CKS2P33552 79 aa11.83□□□□□ -0.52
RXRA-202ENST00000481739 PMCHL1Q16048 86 aa11.83□□□□□ -0.52
RXRA-202ENST00000481739 PRR9Q5T870 116 aa11.83□□□□□ -0.52
RXRA-202ENST00000481739 KLHL30-AS1Q8NEE0 82 aa11.83□□□□□ -0.52
RXRA-202ENST00000481739 PRSS3P2Q8NHM4 247 aa11.83□□□□□ -0.52
RXRA-202ENST00000481739 DPF1Q92782 380 aa11.83□□□□□ -0.52
RXRA-202ENST00000481739 CD33P20138 364 aa11.82□□□□□ -0.52
RXRA-202ENST00000481739 LEPP41159 167 aa11.82□□□□□ -0.52
RXRA-202ENST00000481739 DEFB136Q30KP8 78 aa11.82□□□□□ -0.52
RXRA-202ENST00000481739 VAMP8Q9BV40 100 aa11.82□□□□□ -0.52
RXRA-202ENST00000481739 HSPB8Q9UJY1 196 aa11.82□□□□□ -0.52
RXRA-202ENST00000481739 A0A1W2PRX2 142 aa11.81□□□□□ -0.52
RXRA-202ENST00000481739 LEPROTL1O95214 131 aa11.81□□□□□ -0.52
RXRA-202ENST00000481739 EDN2P20800 178 aa11.81□□□□□ -0.52
RXRA-202ENST00000481739 ASIPP42127 132 aa11.81□□□□□ -0.52
RXRA-202ENST00000481739 DEFA6Q01524 100 aa11.81□□□□□ -0.52
RXRA-202ENST00000481739 PRR31Q5SQ13 230 aa11.81□□□□□ -0.52
RXRA-202ENST00000481739 PRO1933Q9H354 126 aa11.81□□□□□ -0.52
RXRA-202ENST00000481739 TEP1Q99973 2627 aaKnown RBP11.81□□□□□ -0.52
RXRA-202ENST00000481739 CRXO43186 299 aaPredicted RBP11.81□□□□□ -0.52
RXRA-202ENST00000481739 DUSP14O95147 198 aaKnown RBP11.81□□□□□ -0.52
RXRA-202ENST00000481739 SPANXN1Q5VSR9 72 aa11.81□□□□□ -0.52
RXRA-202ENST00000481739 EBLN2Q6P2I7 272 aa11.81□□□□□ -0.52
RXRA-202ENST00000481739 Q8N976 141 aa11.81□□□□□ -0.52
RXRA-202ENST00000481739 C20orf144Q9BQM9 153 aa11.81□□□□□ -0.52
RXRA-202ENST00000481739 TMEM70Q9BUB7 260 aa11.81□□□□□ -0.52
RXRA-202ENST00000481739 MUC21A0A0G2JKD1 596 aa11.8□□□□□ -0.52
RXRA-202ENST00000481739 A0A0J9YX75 114 aa11.8□□□□□ -0.52
RXRA-202ENST00000481739 MUC21A0A140T8X8 626 aa11.8□□□□□ -0.52
RXRA-202ENST00000481739 F6UB75 175 aa11.8□□□□□ -0.52
RXRA-202ENST00000481739 PSMG4Q5JS54 123 aa11.8□□□□□ -0.52
RXRA-202ENST00000481739 MUC21Q5SSG8 566 aa11.8□□□□□ -0.52
RXRA-202ENST00000481739 WFDC3Q8IUB2 231 aa11.8□□□□□ -0.52
RXRA-202ENST00000481739 OR11H1Q8NG94 326 aa11.8□□□□□ -0.52
RXRA-202ENST00000481739 OR1N2Q8NGR9 330 aa11.8□□□□□ -0.52
RXRA-202ENST00000481739 OR10AG1Q8NH19 301 aa11.8□□□□□ -0.52
RXRA-202ENST00000481739 RNF185Q96GF1 192 aa11.8□□□□□ -0.52
RXRA-202ENST00000481739 CITED2Q99967 270 aaPredicted RBP11.8□□□□□ -0.52
RXRA-202ENST00000481739 C20orf202A1L168 122 aa11.79□□□□□ -0.52
RXRA-202ENST00000481739 ZNF688P0C7X2 276 aa11.79□□□□□ -0.52
RXRA-202ENST00000481739 S100A4P26447 101 aaKnown RBP11.79□□□□□ -0.52
RXRA-202ENST00000481739 TSPOP30536 169 aa11.79□□□□□ -0.52
RXRA-202ENST00000481739 RNASE4P34096 147 aaKnown RBP11.79□□□□□ -0.52
RXRA-202ENST00000481739 FOXI2Q6ZQN5 318 aa11.79□□□□□ -0.52
RXRA-202ENST00000481739 OR9G4Q8NGQ1 327 aa11.79□□□□□ -0.52
RXRA-202ENST00000481739 DUX3Q96PT4 197 aa11.79□□□□□ -0.52
RXRA-202ENST00000481739 MSRB1Q9NZV6 116 aa11.79□□□□□ -0.52
RXRA-202ENST00000481739 MAST4O15021 2626 aa11.79□□□□□ -0.52
RXRA-202ENST00000481739 C2CD3Q4AC94 2353 aa11.79□□□□□ -0.52
RXRA-202ENST00000481739 CSN3P07498 182 aa11.79□□□□□ -0.52
RXRA-202ENST00000481739 PROK1P58294 105 aa11.79□□□□□ -0.52
RXRA-202ENST00000481739 SSTP61278 116 aa11.79□□□□□ -0.52
RXRA-202ENST00000481739 MAP1LC3AQ9H492 121 aa11.79□□□□□ -0.52
RXRA-202ENST00000481739 TSSC4Q9Y5U2 329 aaPredicted RBP11.79□□□□□ -0.52
RXRA-202ENST00000481739 JMJD1CQ15652 2540 aa11.78□□□□□ -0.52
RXRA-202ENST00000481739 H3BVH4 76 aa11.78□□□□□ -0.52
RXRA-202ENST00000481739 SLURP1P55000 103 aa11.78□□□□□ -0.52
RXRA-202ENST00000481739 SCRT2Q9NQ03 307 aa11.78□□□□□ -0.52
RXRA-202ENST00000481739 SIGLEC8Q9NYZ4 499 aa11.78□□□□□ -0.52
RXRA-202ENST00000481739 DEFB1P60022 68 aa11.77□□□□□ -0.52
RXRA-202ENST00000481739 ANXA2RQ3ZCQ2 193 aa11.77□□□□□ -0.52
RXRA-202ENST00000481739 NDUFAF3Q9BU61 184 aa11.77□□□□□ -0.52
RXRA-202ENST00000481739 MAP1LC3CQ9BXW4 147 aa11.77□□□□□ -0.52
RXRA-202ENST00000481739 NXT2Q9NPJ8 142 aaKnown RBP11.77□□□□□ -0.52
RXRA-202ENST00000481739 C7orf71A4D174 169 aa11.76□□□□□ -0.53
RXRA-202ENST00000481739 J3KRW8 73 aa11.76□□□□□ -0.53
RXRA-202ENST00000481739 TFPI2P48307 235 aa11.76□□□□□ -0.53
RXRA-202ENST00000481739 CTAG1AP78358 180 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms