RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 SLC25A2Q9BXI2 301 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 WDR61Q9GZS3 305 aaKnown RBP2.86□□□□□ -1.95
VPS13D-208ENST00000481484 OR51M1Q9H341 326 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 OTORQ9NRC9 128 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 GSN-AS1Q9NRJ2 163 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 ZNF492Q9P255 531 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 KLF12Q9Y4X4 402 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 HSPB11Q9Y547 144 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 VPS13BQ7Z7G8 4022 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 FLG2Q5D862 2391 aaPredicted RBP2.86□□□□□ -1.95
VPS13D-208ENST00000481484 SRRM2Q9UQ35 2752 aaKnown RBP2.85□□□□□ -1.95
VPS13D-208ENST00000481484 IGKV2-40A0A087WW87 121 aaPredicted RBP2.85□□□□□ -1.95
VPS13D-208ENST00000481484 TRAV5A0A0B4J249 113 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 TRAV4A0A0B4J268 109 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 TRAV21A0A0B4J279 112 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 TRGV4A0A0C4DH28 118 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 A0A0J9YY99 117 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 B5MCH6 92 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 H3BTX0 84 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 J3KRW8 73 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 K7EQM0 130 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 SSNA1O43805 119 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 IGKV2D-40P01614 121 aaPredicted RBP2.85□□□□□ -1.95
VPS13D-208ENST00000481484 MBP02144 154 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 EVI2AP22794 236 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 RNASE4P34096 147 aaKnown RBP2.85□□□□□ -1.95
VPS13D-208ENST00000481484 FCN2Q15485 313 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 ACOT6Q3I5F7 207 aaPredicted RBP2.85□□□□□ -1.95
VPS13D-208ENST00000481484 FFAR4Q5NUL3 377 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 FAM122CQ6P4D5 195 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 FAM159AQ6UWV7 190 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 MIR17HGQ75NE6 70 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 NEGR1Q7Z3B1 354 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 SPATA12Q7Z6I5 190 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 IQCF2Q8IXL9 164 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 MAPKAPK5-AS1Q8N8E1 139 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 CLRN3Q8NCR9 226 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 SCGB1C1Q8TD33 95 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 PPP1R1CQ8WVI7 109 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 RASL10AQ92737 203 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 VSIG2Q96IQ7 327 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 KCNS1Q96KK3 526 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 MARVELD1Q9BSK0 173 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 KRTAP1-5Q9BYS1 174 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 AGPAT4-IT1Q9H0P7 198 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 LY96Q9Y6Y9 160 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 MYCBP2O75592 4640 aa2.85□□□□□ -1.95
VPS13D-208ENST00000481484 INMT-MINDY4F8WBC2 141 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 M0R2P5 195 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 MPC2O95563 127 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 PRM2P04554 102 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 OR10J4P0C629 311 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 DNAH10OSP0CZ25 163 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 CDC34P49427 236 aaPredicted RBP2.84□□□□□ -1.95
VPS13D-208ENST00000481484 CRYBA4P53673 196 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 NHLH2Q02577 135 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 CD300CQ08708 224 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 ERCC8Q13216 396 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 LAGE3Q14657 143 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 RHOHQ15669 191 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 TMEM183BQ1AE95 376 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 ESRGQ1W209 222 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 LRRC37A5PQ49AS3 106 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 GCSAMLQ5JQS6 135 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 PIK3CD-AS1Q5SR53 167 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 PRR9Q5T870 116 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 Q6ZRN7 208 aaPredicted RBP2.84□□□□□ -1.95
VPS13D-208ENST00000481484 TMEM183AQ8IXX5 376 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 EXOC3-AS1Q8N2X6 119 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 C5orf17Q8NAS9 161 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 OR2G3Q8NGZ4 309 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 Q8TAT8 98 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 NTN5Q8WTR8 489 aaPredicted RBP2.84□□□□□ -1.95
VPS13D-208ENST00000481484 TCEAL7Q9BRU2 100 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 PSMG3Q9BT73 122 aaPredicted RBP2.84□□□□□ -1.95
VPS13D-208ENST00000481484 SDF2L1Q9HCN8 221 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 TMEM167BQ9NRX6 74 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 MRPL16Q9NX20 251 aaKnown RBP2.84□□□□□ -1.95
VPS13D-208ENST00000481484 OR5AC2Q9NZP5 309 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 MSRB1Q9NZV6 116 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 FAM30AQ9NZY2 134 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 MBD2Q9UBB5 411 aa2.84□□□□□ -1.95
VPS13D-208ENST00000481484 A0A1W2PPV4 95 aa2.83□□□□□ -1.96
VPS13D-208ENST00000481484 K7EQD1 137 aa2.83□□□□□ -1.96
VPS13D-208ENST00000481484 RHODO00212 210 aa2.83□□□□□ -1.96
VPS13D-208ENST00000481484 PTTG1O95997 202 aa2.83□□□□□ -1.96
VPS13D-208ENST00000481484 PFN1P07737 140 aaKnown RBP2.83□□□□□ -1.96
VPS13D-208ENST00000481484 SNRPCP09234 159 aaKnown RBP2.83□□□□□ -1.96
VPS13D-208ENST00000481484 SEC11BP0C7V7 166 aa2.83□□□□□ -1.96
VPS13D-208ENST00000481484 MGST1P10620 155 aaKnown RBP2.83□□□□□ -1.96
VPS13D-208ENST00000481484 RPL12P30050 165 aaKnown RBP2.83□□□□□ -1.96
VPS13D-208ENST00000481484 PPT1P50897 306 aa2.83□□□□□ -1.96
VPS13D-208ENST00000481484 H2BFSP57053 126 aa2.83□□□□□ -1.96
VPS13D-208ENST00000481484 RANP62826 216 aaKnown RBP2.83□□□□□ -1.96
VPS13D-208ENST00000481484 SERF2P84101 59 aa2.83□□□□□ -1.96
VPS13D-208ENST00000481484 LINC01556Q5JQF7 62 aa2.83□□□□□ -1.96
VPS13D-208ENST00000481484 TOR2AQ5JU69 321 aa2.83□□□□□ -1.96
VPS13D-208ENST00000481484 TMEM75Q8N9X5 138 aa2.83□□□□□ -1.96
VPS13D-208ENST00000481484 PTH2Q96A98 100 aa2.83□□□□□ -1.96
VPS13D-208ENST00000481484 PRADC1Q9BSG0 188 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms