RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 CYB561D1Q8N8Q1 229 aa7.92□□□□□ -1.14
CCM2-213ENST00000480658 TMEM75Q8N9X5 138 aa7.92□□□□□ -1.14
CCM2-213ENST00000480658 RAB24Q969Q5 203 aa7.92□□□□□ -1.14
CCM2-213ENST00000480658 WFDC1Q9HC57 220 aa7.92□□□□□ -1.14
CCM2-213ENST00000480658 A0A1W2PRE2 83 aa7.91□□□□□ -1.14
CCM2-213ENST00000480658 PFN1P07737 140 aaKnown RBP7.91□□□□□ -1.14
CCM2-213ENST00000480658 GCHFRP30047 84 aa7.91□□□□□ -1.14
CCM2-213ENST00000480658 SMUG1Q53HV7 270 aa7.91□□□□□ -1.14
CCM2-213ENST00000480658 C10orf126Q8N4M7 172 aa7.91□□□□□ -1.14
CCM2-213ENST00000480658 OR4C5Q8NGB2 326 aa7.91□□□□□ -1.14
CCM2-213ENST00000480658 CTXND1A0A1B0GTU2 59 aa7.9□□□□□ -1.14
CCM2-213ENST00000480658 C16orf90A8MZG2 172 aa7.9□□□□□ -1.14
CCM2-213ENST00000480658 FHL2Q14192 279 aa7.9□□□□□ -1.14
CCM2-213ENST00000480658 PIK3CD-AS1Q5SR53 167 aa7.9□□□□□ -1.14
CCM2-213ENST00000480658 AKR1C8PQ5T2L2 129 aa7.9□□□□□ -1.14
CCM2-213ENST00000480658 OR2T35Q8NGX2 323 aa7.9□□□□□ -1.14
CCM2-213ENST00000480658 MDFICQ9P1T7 246 aa7.9□□□□□ -1.14
CCM2-213ENST00000480658 LY96Q9Y6Y9 160 aa7.9□□□□□ -1.14
CCM2-213ENST00000480658 FAT2Q9NYQ8 4349 aa7.89□□□□□ -1.15
CCM2-213ENST00000480658 FXYD6-FXYD2A0A087WZ82 144 aa7.89□□□□□ -1.15
CCM2-213ENST00000480658 IGHV3-16A0A0C4DH30 117 aa7.89□□□□□ -1.15
CCM2-213ENST00000480658 F6UZH7 168 aa7.89□□□□□ -1.15
CCM2-213ENST00000480658 HMGB3O15347 200 aaKnown RBP7.89□□□□□ -1.15
CCM2-213ENST00000480658 CDK2AP2O75956 126 aa7.89□□□□□ -1.15
CCM2-213ENST00000480658 NXPH4O95158 308 aa7.89□□□□□ -1.15
CCM2-213ENST00000480658 IGHV3-53P01767 116 aa7.89□□□□□ -1.15
CCM2-213ENST00000480658 EVI2AP22794 236 aa7.89□□□□□ -1.15
CCM2-213ENST00000480658 TIRAPP58753 221 aa7.89□□□□□ -1.15
CCM2-213ENST00000480658 FLI1Q01543 452 aaPredicted RBP7.89□□□□□ -1.15
CCM2-213ENST00000480658 STOML3Q8TAV4 291 aa7.89□□□□□ -1.15
CCM2-213ENST00000480658 HIST1H2BAQ96A08 127 aa7.89□□□□□ -1.15
CCM2-213ENST00000480658 PTH2Q96A98 100 aa7.89□□□□□ -1.15
CCM2-213ENST00000480658 C8orf49Q96NF6 230 aa7.89□□□□□ -1.15
CCM2-213ENST00000480658 PRADC1Q9BSG0 188 aa7.89□□□□□ -1.15
CCM2-213ENST00000480658 EPDR1Q9UM22 224 aa7.89□□□□□ -1.15
CCM2-213ENST00000480658 DNAH2Q9P225 4427 aa7.89□□□□□ -1.15
CCM2-213ENST00000480658 K7EQD1 137 aa7.88□□□□□ -1.15
CCM2-213ENST00000480658 GCGP01275 180 aa7.88□□□□□ -1.15
CCM2-213ENST00000480658 TYMSP04818 313 aa7.88□□□□□ -1.15
CCM2-213ENST00000480658 ERVFC1-1P60608 527 aa7.88□□□□□ -1.15
CCM2-213ENST00000480658 SUMO1P63165 101 aaKnown RBP7.88□□□□□ -1.15
CCM2-213ENST00000480658 TNP2Q05952 138 aa7.88□□□□□ -1.15
CCM2-213ENST00000480658 RHOHQ15669 191 aa7.88□□□□□ -1.15
CCM2-213ENST00000480658 PSG8Q9UQ74 426 aa7.88□□□□□ -1.15
CCM2-213ENST00000480658 ARL2-SNX15V9GYD0 113 aa7.88□□□□□ -1.15
CCM2-213ENST00000480658 TRAV8-1A0A0A6YYK1 113 aa7.87□□□□□ -1.15
CCM2-213ENST00000480658 TRBV6-4A0A1B0GX49 114 aa7.87□□□□□ -1.15
CCM2-213ENST00000480658 RNF222A6NCQ9 220 aa7.87□□□□□ -1.15
CCM2-213ENST00000480658 IFNA7P01567 189 aa7.87□□□□□ -1.15
CCM2-213ENST00000480658 MGST1P10620 155 aaKnown RBP7.87□□□□□ -1.15
CCM2-213ENST00000480658 GYPEP15421 78 aa7.87□□□□□ -1.15
CCM2-213ENST00000480658 GNG5P63218 68 aa7.87□□□□□ -1.15
CCM2-213ENST00000480658 ZNF345Q14585 488 aa7.87□□□□□ -1.15
CCM2-213ENST00000480658 ZNF876PQ49A33 203 aa7.87□□□□□ -1.15
CCM2-213ENST00000480658 CDPF1Q6NVV7 123 aa7.87□□□□□ -1.15
CCM2-213ENST00000480658 LYPD5Q6UWN5 251 aa7.87□□□□□ -1.15
CCM2-213ENST00000480658 ZNF479Q96JC4 524 aa7.87□□□□□ -1.15
CCM2-213ENST00000480658 GGTLC3B5MD39 225 aa7.86□□□□□ -1.15
CCM2-213ENST00000480658 S100A4P26447 101 aaKnown RBP7.86□□□□□ -1.15
CCM2-213ENST00000480658 LINC00315P59091 139 aa7.86□□□□□ -1.15
CCM2-213ENST00000480658 EIF5AP63241 154 aaKnown RBP7.86□□□□□ -1.15
CCM2-213ENST00000480658 RPL7L1Q6DKI1 246 aaKnown RBP7.86□□□□□ -1.15
CCM2-213ENST00000480658 FMC1Q96HJ9 113 aa7.86□□□□□ -1.15
CCM2-213ENST00000480658 ZFP30Q9Y2G7 519 aa7.86□□□□□ -1.15
CCM2-213ENST00000480658 PKHD1P08F94 4074 aa7.85□□□□□ -1.15
CCM2-213ENST00000480658 TRAV8-6A0A0B4J262 113 aa7.85□□□□□ -1.15
CCM2-213ENST00000480658 FABP5P3A8MUU1 101 aa7.85□□□□□ -1.15
CCM2-213ENST00000480658 A8MWV9 139 aa7.85□□□□□ -1.15
CCM2-213ENST00000480658 UMAD1C9J7I0 102 aa7.85□□□□□ -1.15
CCM2-213ENST00000480658 DNAH10OSP0CZ25 163 aa7.85□□□□□ -1.15
CCM2-213ENST00000480658 GATA1P15976 413 aaPredicted RBP7.85□□□□□ -1.15
CCM2-213ENST00000480658 FHITP49789 147 aa7.85□□□□□ -1.15
CCM2-213ENST00000480658 UBE2G1P62253 170 aa7.85□□□□□ -1.15
CCM2-213ENST00000480658 ZFP2Q6ZN57 461 aa7.85□□□□□ -1.15
CCM2-213ENST00000480658 Q6ZQT7 251 aa7.85□□□□□ -1.15
CCM2-213ENST00000480658 PRNTQ86SH4 94 aa7.85□□□□□ -1.15
CCM2-213ENST00000480658 NHLRC2Q8NBF2 726 aa7.85□□□□□ -1.15
CCM2-213ENST00000480658 PGPEP1Q9NXJ5 209 aa7.85□□□□□ -1.15
CCM2-213ENST00000480658 PEX7O00628 323 aa7.84□□□□□ -1.15
CCM2-213ENST00000480658 ARPC5O15511 151 aa7.84□□□□□ -1.15
CCM2-213ENST00000480658 GNRH2O43555 120 aa7.84□□□□□ -1.15
CCM2-213ENST00000480658 SFTA3P0C7M3 94 aa7.84□□□□□ -1.15
CCM2-213ENST00000480658 ASIPP42127 132 aa7.84□□□□□ -1.15
CCM2-213ENST00000480658 DPPA3Q6W0C5 159 aa7.84□□□□□ -1.15
CCM2-213ENST00000480658 SPATA12Q7Z6I5 190 aa7.84□□□□□ -1.15
CCM2-213ENST00000480658 ZNF575Q86XF7 245 aa7.84□□□□□ -1.15
CCM2-213ENST00000480658 SYT8Q8NBV8 401 aa7.84□□□□□ -1.15
CCM2-213ENST00000480658 TVP23CQ96ET8 276 aa7.84□□□□□ -1.15
CCM2-213ENST00000480658 C9orf85Q96MD7 179 aa7.84□□□□□ -1.15
CCM2-213ENST00000480658 KRTAP1-5Q9BYS1 174 aa7.84□□□□□ -1.15
CCM2-213ENST00000480658 PKD1P98161 4303 aa7.83□□□□□ -1.16
CCM2-213ENST00000480658 A0A0D9SG52 128 aa7.83□□□□□ -1.16
CCM2-213ENST00000480658 MAP1LC3B2A6NCE7 125 aa7.83□□□□□ -1.16
CCM2-213ENST00000480658 RHODO00212 210 aa7.83□□□□□ -1.16
CCM2-213ENST00000480658 EIF3GO75821 320 aaKnown RBP eCLIP7.83□□□□□ -1.16
CCM2-213ENST00000480658 IGLV2-11P01706 119 aa7.83□□□□□ -1.16
CCM2-213ENST00000480658 S100A9P06702 114 aaKnown RBP7.83□□□□□ -1.16
CCM2-213ENST00000480658 FGF8P55075 233 aaPredicted RBP7.83□□□□□ -1.16
CCM2-213ENST00000480658 CFAP126Q5VTH2 177 aa7.83□□□□□ -1.16
CCM2-213ENST00000480658 Q86TA4 180 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 223.4 ms