RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 ZNF767PQ75MW2 155 aa6.48□□□□□ -1.37
VCP-206ENST00000480327 C11orf52Q96A22 123 aa6.48□□□□□ -1.37
VCP-206ENST00000480327 ZC2HC1AQ96GY0 325 aa6.48□□□□□ -1.37
VCP-206ENST00000480327 TXNDC17Q9BRA2 123 aa6.48□□□□□ -1.37
VCP-206ENST00000480327 PYGO2Q9BRQ0 406 aa6.48□□□□□ -1.37
VCP-206ENST00000480327 C11orf68Q9H3H3 251 aaKnown RBP6.48□□□□□ -1.37
VCP-206ENST00000480327 CELA1Q9UNI1 258 aa6.48□□□□□ -1.37
VCP-206ENST00000480327 IGHV1OR15-1A0A075B7D0 117 aa6.47□□□□□ -1.37
VCP-206ENST00000480327 TRAV21A0A0B4J279 112 aa6.47□□□□□ -1.37
VCP-206ENST00000480327 LTAP01374 205 aa6.47□□□□□ -1.37
VCP-206ENST00000480327 S100A9P06702 114 aaKnown RBP6.47□□□□□ -1.37
VCP-206ENST00000480327 NANOS2P60321 138 aaKnown RBP6.47□□□□□ -1.37
VCP-206ENST00000480327 RAB14P61106 215 aa6.47□□□□□ -1.37
VCP-206ENST00000480327 ANXA2RQ3ZCQ2 193 aa6.47□□□□□ -1.37
VCP-206ENST00000480327 LGALS9CQ6DKI2 356 aa6.47□□□□□ -1.37
VCP-206ENST00000480327 FAM159AQ6UWV7 190 aa6.47□□□□□ -1.37
VCP-206ENST00000480327 BAGE2Q86Y30 109 aa6.47□□□□□ -1.37
VCP-206ENST00000480327 EIF4E3Q8N5X7 224 aaKnown RBP6.47□□□□□ -1.37
VCP-206ENST00000480327 C11orf45Q8TAV5 145 aa6.47□□□□□ -1.37
VCP-206ENST00000480327 PHLDA1Q8WV24 401 aaPredicted RBP6.47□□□□□ -1.37
VCP-206ENST00000480327 C11orf21Q9P2W6 132 aa6.47□□□□□ -1.37
VCP-206ENST00000480327 ZFP30Q9Y2G7 519 aa6.47□□□□□ -1.37
VCP-206ENST00000480327 TRBV6-1A0A0K0K1D8 114 aa6.46□□□□□ -1.38
VCP-206ENST00000480327 PLAC8L1A1L4L8 177 aa6.46□□□□□ -1.38
VCP-206ENST00000480327 TMEM189A5PLL7 270 aa6.46□□□□□ -1.38
VCP-206ENST00000480327 PGPEP1LA6NFU8 196 aa6.46□□□□□ -1.38
VCP-206ENST00000480327 GNRH2O43555 120 aa6.46□□□□□ -1.38
VCP-206ENST00000480327 PFN1P07737 140 aaKnown RBP6.46□□□□□ -1.38
VCP-206ENST00000480327 CRIP1P50238 77 aa6.46□□□□□ -1.38
VCP-206ENST00000480327 SRSF3P84103 164 aaKnown RBP6.46□□□□□ -1.38
VCP-206ENST00000480327 CENPWQ5EE01 88 aa6.46□□□□□ -1.38
VCP-206ENST00000480327 FAM222AQ5U5X8 452 aa6.46□□□□□ -1.38
VCP-206ENST00000480327 PRR27Q6MZM9 219 aa6.46□□□□□ -1.38
VCP-206ENST00000480327 TMEM183AQ8IXX5 376 aa6.46□□□□□ -1.38
VCP-206ENST00000480327 RNASE8Q8TDE3 154 aaKnown RBP6.46□□□□□ -1.38
VCP-206ENST00000480327 TMEM263Q8WUH6 116 aaKnown RBP6.46□□□□□ -1.38
VCP-206ENST00000480327 C16orf74Q96GX8 76 aa6.46□□□□□ -1.38
VCP-206ENST00000480327 NOP10Q9NPE3 64 aaKnown RBP6.46□□□□□ -1.38
VCP-206ENST00000480327 GSN-AS1Q9NRJ2 163 aa6.46□□□□□ -1.38
VCP-206ENST00000480327 FABP5P3A8MUU1 101 aa6.45□□□□□ -1.38
VCP-206ENST00000480327 SNURFLB1AK76 121 aa6.45□□□□□ -1.38
VCP-206ENST00000480327 M0R036 132 aa6.45□□□□□ -1.38
VCP-206ENST00000480327 SH2D1AO60880 128 aa6.45□□□□□ -1.38
VCP-206ENST00000480327 ORM1P02763 201 aa6.45□□□□□ -1.38
VCP-206ENST00000480327 SRP19P09132 144 aaKnown RBP6.45□□□□□ -1.38
VCP-206ENST00000480327 SPART-AS1P0CW21 52 aa6.45□□□□□ -1.38
VCP-206ENST00000480327 DEFB130BP0DP73 79 aa6.45□□□□□ -1.38
VCP-206ENST00000480327 DEFB130AP0DP74 79 aa6.45□□□□□ -1.38
VCP-206ENST00000480327 MGST1P10620 155 aaKnown RBP6.45□□□□□ -1.38
VCP-206ENST00000480327 GNG4P50150 75 aa6.45□□□□□ -1.38
VCP-206ENST00000480327 LINC00467Q9BRT7 94 aa6.45□□□□□ -1.38
VCP-206ENST00000480327 PARLQ9H300 379 aa6.45□□□□□ -1.38
VCP-206ENST00000480327 SDF2L1Q9HCN8 221 aa6.45□□□□□ -1.38
VCP-206ENST00000480327 MDFICQ9P1T7 246 aa6.45□□□□□ -1.38
VCP-206ENST00000480327 DKK2Q9UBU2 259 aa6.45□□□□□ -1.38
VCP-206ENST00000480327 KLK5Q9Y337 293 aaPredicted RBP6.45□□□□□ -1.38
VCP-206ENST00000480327 TRBV20OR9-2A0A075B6H5 130 aa6.44□□□□□ -1.38
VCP-206ENST00000480327 TMSB15BA0A087X1C1 80 aa6.44□□□□□ -1.38
VCP-206ENST00000480327 C9JQL5 133 aa6.44□□□□□ -1.38
VCP-206ENST00000480327 TMEM250H0YL14 139 aa6.44□□□□□ -1.38
VCP-206ENST00000480327 TYMSP04818 313 aa6.44□□□□□ -1.38
VCP-206ENST00000480327 C12orf74Q32Q52 190 aa6.44□□□□□ -1.38
VCP-206ENST00000480327 CLLU1Q5K131 121 aa6.44□□□□□ -1.38
VCP-206ENST00000480327 FAM162BQ5T6X4 162 aa6.44□□□□□ -1.38
VCP-206ENST00000480327 ZNF493Q6ZR52 646 aa6.44□□□□□ -1.38
VCP-206ENST00000480327 C11orf72Q8NBR9 251 aa6.44□□□□□ -1.38
VCP-206ENST00000480327 MLST8Q9BVC4 326 aa6.44□□□□□ -1.38
VCP-206ENST00000480327 TIMM8BQ9Y5J9 83 aaPredicted RBP6.44□□□□□ -1.38
VCP-206ENST00000480327 MUC4Q99102 2169 aa6.43□□□□□ -1.38
VCP-206ENST00000480327 TRGV11A0A075B6L2 103 aa6.43□□□□□ -1.38
VCP-206ENST00000480327 IGKV3D-20A0A0C4DH25 116 aa6.43□□□□□ -1.38
VCP-206ENST00000480327 IGHV3-16A0A0C4DH30 117 aa6.43□□□□□ -1.38
VCP-206ENST00000480327 GAGE12BA1L429 117 aa6.43□□□□□ -1.38
VCP-206ENST00000480327 GRIFINA4D1Z8 144 aa6.43□□□□□ -1.38
VCP-206ENST00000480327 B4DEV8 164 aa6.43□□□□□ -1.38
VCP-206ENST00000480327 GAGE7O76087 117 aa6.43□□□□□ -1.38
VCP-206ENST00000480327 IGLV2-8P01709 118 aa6.43□□□□□ -1.38
VCP-206ENST00000480327 GAGE12FP0CL80 117 aa6.43□□□□□ -1.38
VCP-206ENST00000480327 GAGE12GP0CL81 117 aa6.43□□□□□ -1.38
VCP-206ENST00000480327 GAGE12IP0CL82 117 aa6.43□□□□□ -1.38
VCP-206ENST00000480327 HTN3P15516 51 aa6.43□□□□□ -1.38
VCP-206ENST00000480327 DAD1P61803 113 aa6.43□□□□□ -1.38
VCP-206ENST00000480327 ZNF415Q09FC8 603 aa6.43□□□□□ -1.38
VCP-206ENST00000480327 PEA15Q15121 130 aa6.43□□□□□ -1.38
VCP-206ENST00000480327 Q6ZTC4 211 aa6.43□□□□□ -1.38
VCP-206ENST00000480327 COX8CQ7Z4L0 72 aa6.43□□□□□ -1.38
VCP-206ENST00000480327 KCNS1Q96KK3 526 aa6.43□□□□□ -1.38
VCP-206ENST00000480327 MRPL16Q9NX20 251 aaKnown RBP6.43□□□□□ -1.38
VCP-206ENST00000480327 TRGV1A0A0A0MS02 117 aa6.42□□□□□ -1.38
VCP-206ENST00000480327 LYRM9A8MSI8 78 aa6.42□□□□□ -1.38
VCP-206ENST00000480327 ZNF727A8MUV8 499 aa6.42□□□□□ -1.38
VCP-206ENST00000480327 TCL1AP56279 114 aa6.42□□□□□ -1.38
VCP-206ENST00000480327 RPL19P84098 196 aaKnown RBP6.42□□□□□ -1.38
VCP-206ENST00000480327 OR5I1Q13606 314 aa6.42□□□□□ -1.38
VCP-206ENST00000480327 TDRG1Q3Y452 100 aa6.42□□□□□ -1.38
VCP-206ENST00000480327 Q6ZTI0 123 aa6.42□□□□□ -1.38
VCP-206ENST00000480327 OCC1Q8TAD7 63 aa6.42□□□□□ -1.38
VCP-206ENST00000480327 SMIM7Q9BQ49 75 aa6.42□□□□□ -1.38
VCP-206ENST00000480327 APLNQ9ULZ1 77 aa6.42□□□□□ -1.38
VCP-206ENST00000480327 TMA7Q9Y2S6 64 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 350.8 ms