RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 ODF3L2Q3SX64 289 aa6.14□□□□□ -1.43
USP54-212ENST00000480210 GCSAMLQ5JQS6 135 aa6.14□□□□□ -1.43
USP54-212ENST00000480210 EBLN2Q6P2I7 272 aa6.14□□□□□ -1.43
USP54-212ENST00000480210 MIR17HGQ75NE6 70 aa6.14□□□□□ -1.43
USP54-212ENST00000480210 KIR2DL5BQ8NHK3 375 aa6.14□□□□□ -1.43
USP54-212ENST00000480210 SFRP2Q96HF1 295 aa6.14□□□□□ -1.43
USP54-212ENST00000480210 FAM167A-AS1Q96KT0 104 aa6.14□□□□□ -1.43
USP54-212ENST00000480210 AP1S3Q96PC3 154 aa6.14□□□□□ -1.43
USP54-212ENST00000480210 SLC25A2Q9BXI2 301 aa6.14□□□□□ -1.43
USP54-212ENST00000480210 PARLQ9H300 379 aa6.14□□□□□ -1.43
USP54-212ENST00000480210 AAMDCQ9H7C9 122 aa6.14□□□□□ -1.43
USP54-212ENST00000480210 ZNF331Q9NQX6 463 aaPredicted RBP6.14□□□□□ -1.43
USP54-212ENST00000480210 TMEM167BQ9NRX6 74 aa6.14□□□□□ -1.43
USP54-212ENST00000480210 NOTCH1P46531 2555 aa6.13□□□□□ -1.43
USP54-212ENST00000480210 TRBV19A0A075B6N1 114 aa6.13□□□□□ -1.43
USP54-212ENST00000480210 OR7C2O60412 319 aa6.13□□□□□ -1.43
USP54-212ENST00000480210 DUSP14O95147 198 aaKnown RBP6.13□□□□□ -1.43
USP54-212ENST00000480210 HLA-DQA1P01909 254 aa6.13□□□□□ -1.43
USP54-212ENST00000480210 ZNF688P0C7X2 276 aa6.13□□□□□ -1.43
USP54-212ENST00000480210 NHLRC4P0CG21 123 aaPredicted RBP6.13□□□□□ -1.43
USP54-212ENST00000480210 PMCHP20382 165 aa6.13□□□□□ -1.43
USP54-212ENST00000480210 APOC4P55056 127 aa6.13□□□□□ -1.43
USP54-212ENST00000480210 MORN5Q5VZ52 161 aa6.13□□□□□ -1.43
USP54-212ENST00000480210 CFAP161Q6P656 301 aa6.13□□□□□ -1.43
USP54-212ENST00000480210 MORN3Q6PF18 240 aaPredicted RBP6.13□□□□□ -1.43
USP54-212ENST00000480210 LINC00322Q6ZN03 302 aaPredicted RBP6.13□□□□□ -1.43
USP54-212ENST00000480210 FOXI2Q6ZQN5 318 aa6.13□□□□□ -1.43
USP54-212ENST00000480210 STHQ8IWL8 128 aa6.13□□□□□ -1.43
USP54-212ENST00000480210 RPP25LQ8N5L8 163 aaKnown RBP6.13□□□□□ -1.43
USP54-212ENST00000480210 DEFB125Q8N687 156 aa6.13□□□□□ -1.43
USP54-212ENST00000480210 OR5A1Q8NGJ0 315 aa6.13□□□□□ -1.43
USP54-212ENST00000480210 KCNS1Q96KK3 526 aa6.13□□□□□ -1.43
USP54-212ENST00000480210 SSBP4Q9BWG4 385 aaPredicted RBP6.13□□□□□ -1.43
USP54-212ENST00000480210 IL36BQ9NZH7 164 aa6.13□□□□□ -1.43
USP54-212ENST00000480210 CSN1S1P47710 185 aa6.12□□□□□ -1.43
USP54-212ENST00000480210 MAJINQ3KP22 176 aa6.12□□□□□ -1.43
USP54-212ENST00000480210 NBEAL1Q6ZS30 2694 aa6.12□□□□□ -1.43
USP54-212ENST00000480210 STPG4Q8N801 248 aa6.12□□□□□ -1.43
USP54-212ENST00000480210 FXYD5Q96DB9 178 aa6.12□□□□□ -1.43
USP54-212ENST00000480210 C17orf77Q96MU5 243 aa6.12□□□□□ -1.43
USP54-212ENST00000480210 B9D2Q9BPU9 175 aa6.12□□□□□ -1.43
USP54-212ENST00000480210 SELENOKQ9Y6D0 94 aa6.12□□□□□ -1.43
USP54-212ENST00000480210 TRAV8-2A0A0B4J237 113 aa6.11□□□□□ -1.43
USP54-212ENST00000480210 A0A1B0GV50 99 aa6.11□□□□□ -1.43
USP54-212ENST00000480210 A0A1W2PRE2 83 aa6.11□□□□□ -1.43
USP54-212ENST00000480210 A6NDN8 102 aa6.11□□□□□ -1.43
USP54-212ENST00000480210 C9JCJ5 164 aa6.11□□□□□ -1.43
USP54-212ENST00000480210 PRB2P02812 416 aaPredicted RBP6.11□□□□□ -1.43
USP54-212ENST00000480210 OR5AL1P0C617 328 aa6.11□□□□□ -1.43
USP54-212ENST00000480210 OR10J4P0C629 311 aa6.11□□□□□ -1.43
USP54-212ENST00000480210 FRMD6-AS1P0C7T7 363 aa6.11□□□□□ -1.43
USP54-212ENST00000480210 PYYP10082 97 aa6.11□□□□□ -1.43
USP54-212ENST00000480210 HLA-DRB4P13762 266 aa6.11□□□□□ -1.43
USP54-212ENST00000480210 UBE2L3P68036 154 aaKnown RBP6.11□□□□□ -1.43
USP54-212ENST00000480210 Q6ZWC4 215 aa6.11□□□□□ -1.43
USP54-212ENST00000480210 C1QTNF4Q9BXJ3 329 aa6.11□□□□□ -1.43
USP54-212ENST00000480210 MRPL18Q9H0U6 180 aaKnown RBP6.11□□□□□ -1.43
USP54-212ENST00000480210 OTORQ9NRC9 128 aa6.11□□□□□ -1.43
USP54-212ENST00000480210 RFNGQ9Y644 331 aa6.11□□□□□ -1.43
USP54-212ENST00000480210 HLA-DRB4X5D2U9 266 aa6.11□□□□□ -1.43
USP54-212ENST00000480210 A0A0J9YX75 114 aa6.1□□□□□ -1.43
USP54-212ENST00000480210 SERTM2A0A1B0GWG4 89 aa6.1□□□□□ -1.43
USP54-212ENST00000480210 GAGE12BA1L429 117 aa6.1□□□□□ -1.43
USP54-212ENST00000480210 RBAKDNA6NC62 111 aa6.1□□□□□ -1.43
USP54-212ENST00000480210 FBLL1A6NHQ2 334 aaKnown RBP6.1□□□□□ -1.43
USP54-212ENST00000480210 PRSS47A8MTI9 375 aa6.1□□□□□ -1.43
USP54-212ENST00000480210 H0Y8G0 127 aa6.1□□□□□ -1.43
USP54-212ENST00000480210 H3BMM0 161 aa6.1□□□□□ -1.43
USP54-212ENST00000480210 ZNF324O75467 553 aaPredicted RBP6.1□□□□□ -1.43
USP54-212ENST00000480210 NDUFB4O95168 129 aa6.1□□□□□ -1.43
USP54-212ENST00000480210 SLC25A5P05141 298 aaKnown RBP6.1□□□□□ -1.43
USP54-212ENST00000480210 ARL14EPLP0DKL9 152 aa6.1□□□□□ -1.43
USP54-212ENST00000480210 GCHFRP30047 84 aa6.1□□□□□ -1.43
USP54-212ENST00000480210 AMTP48728 403 aa6.1□□□□□ -1.43
USP54-212ENST00000480210 TRPT1Q86TN4 253 aaKnown RBP6.1□□□□□ -1.43
USP54-212ENST00000480210 APRG1Q8IVJ8 170 aa6.1□□□□□ -1.43
USP54-212ENST00000480210 OR10J6PQ8NGY7 276 aa6.1□□□□□ -1.43
USP54-212ENST00000480210 BLNKQ8WV28 456 aa6.1□□□□□ -1.43
USP54-212ENST00000480210 ZNF503Q96F45 646 aa6.1□□□□□ -1.43
USP54-212ENST00000480210 LINC00477Q96M19 166 aa6.1□□□□□ -1.43
USP54-212ENST00000480210 ZMAT4Q9H898 229 aa6.1□□□□□ -1.43
USP54-212ENST00000480210 TRBV7-9A0A0J9YWB2 115 aa6.09□□□□□ -1.43
USP54-212ENST00000480210 RBMY1BA6NDE4 496 aaKnown RBP6.09□□□□□ -1.43
USP54-212ENST00000480210 RBMY1EA6NEQ0 496 aaKnown RBP6.09□□□□□ -1.43
USP54-212ENST00000480210 A8MTW9 85 aa6.09□□□□□ -1.43
USP54-212ENST00000480210 C11orf94C9JXX5 98 aa6.09□□□□□ -1.43
USP54-212ENST00000480210 SERF1AO75920 110 aa6.09□□□□□ -1.43
USP54-212ENST00000480210 RBMY1DP0C7P1 496 aaKnown RBP6.09□□□□□ -1.43
USP54-212ENST00000480210 KRTDAPP60985 99 aa6.09□□□□□ -1.43
USP54-212ENST00000480210 HIST1H1AQ02539 215 aaPredicted RBP6.09□□□□□ -1.43
USP54-212ENST00000480210 OR8A1Q8NGG7 326 aa6.09□□□□□ -1.43
USP54-212ENST00000480210 ODF3Q96PU9 254 aa6.09□□□□□ -1.43
USP54-212ENST00000480210 SPATA25Q9BR10 227 aa6.09□□□□□ -1.43
USP54-212ENST00000480210 TMEM191AQ9H0A3 160 aa6.09□□□□□ -1.43
USP54-212ENST00000480210 Q9H3A6 140 aa6.09□□□□□ -1.43
USP54-212ENST00000480210 TP53TG1Q9Y2A0 90 aa6.09□□□□□ -1.43
USP54-212ENST00000480210 PGPA6NDG6 321 aa6.08□□□□□ -1.44
USP54-212ENST00000480210 GAGE10A6NGK3 116 aa6.08□□□□□ -1.44
USP54-212ENST00000480210 K7EQM0 130 aa6.08□□□□□ -1.44
USP54-212ENST00000480210 SLC17A3O00476 420 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms