RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 TRBV10-1A0A0K0K1A3 114 aa4.84□□□□□ -1.63
PRPF4B-205ENST00000480058 LINC01619G3V211 115 aa4.84□□□□□ -1.63
PRPF4B-205ENST00000480058 Q8N1Y9 231 aa4.84□□□□□ -1.63
PRPF4B-205ENST00000480058 A0A0G2JNJ9 132 aa4.84□□□□□ -1.63
PRPF4B-205ENST00000480058 LYNX1G3V0Z9 82 aa4.84□□□□□ -1.63
PRPF4B-205ENST00000480058 LYNX1P0DP58 116 aa4.84□□□□□ -1.63
PRPF4B-205ENST00000480058 EGR2P11161 476 aaPredicted RBP4.84□□□□□ -1.63
PRPF4B-205ENST00000480058 PATE2Q6UY27 113 aa4.84□□□□□ -1.63
PRPF4B-205ENST00000480058 PCP2Q8IVA1 136 aa4.84□□□□□ -1.63
PRPF4B-205ENST00000480058 GTSF1Q8WW33 167 aa4.84□□□□□ -1.63
PRPF4B-205ENST00000480058 MLST8Q9BVC4 326 aa4.84□□□□□ -1.63
PRPF4B-205ENST00000480058 Q9UFV3 132 aa4.84□□□□□ -1.63
PRPF4B-205ENST00000480058 C11orf86A6NJI1 115 aa4.84□□□□□ -1.64
PRPF4B-205ENST00000480058 I3L2K1 104 aa4.84□□□□□ -1.64
PRPF4B-205ENST00000480058 TMEM105Q8N8V8 129 aa4.84□□□□□ -1.64
PRPF4B-205ENST00000480058 RMI2Q96E14 147 aa4.84□□□□□ -1.64
PRPF4B-205ENST00000480058 RBBP6Q7Z6E9 1792 aaKnown RBP4.84□□□□□ -1.64
PRPF4B-205ENST00000480058 MED13Q9UHV7 2174 aa4.84□□□□□ -1.64
PRPF4B-205ENST00000480058 A0A087WWL8 130 aa4.83□□□□□ -1.64
PRPF4B-205ENST00000480058 B5MCH6 92 aa4.83□□□□□ -1.64
PRPF4B-205ENST00000480058 K7EIM0 57 aa4.83□□□□□ -1.64
PRPF4B-205ENST00000480058 BUB3O43684 328 aa4.83□□□□□ -1.64
PRPF4B-205ENST00000480058 IGLV1-47P01700 117 aa4.83□□□□□ -1.64
PRPF4B-205ENST00000480058 MSMBP08118 114 aa4.83□□□□□ -1.64
PRPF4B-205ENST00000480058 ZFHX2Q9C0A1 2572 aaPredicted RBP4.83□□□□□ -1.64
PRPF4B-205ENST00000480058 G3V4G9 280 aa4.83□□□□□ -1.64
PRPF4B-205ENST00000480058 TFF1P04155 84 aa4.83□□□□□ -1.64
PRPF4B-205ENST00000480058 LYPD2Q6UXB3 125 aa4.83□□□□□ -1.64
PRPF4B-205ENST00000480058 ORMDL1Q9P0S3 153 aa4.83□□□□□ -1.64
PRPF4B-205ENST00000480058 LTBP1Q14766 1721 aa4.83□□□□□ -1.64
PRPF4B-205ENST00000480058 C5orf24Q7Z6I8 188 aa4.83□□□□□ -1.64
PRPF4B-205ENST00000480058 MORN5Q5VZ52 161 aa4.83□□□□□ -1.64
PRPF4B-205ENST00000480058 C9orf47Q6ZRZ4 202 aa4.83□□□□□ -1.64
PRPF4B-205ENST00000480058 MCRIP2Q9BUT9 160 aaKnown RBP4.83□□□□□ -1.64
PRPF4B-205ENST00000480058 TP73-AS1Q9UF72 201 aa4.83□□□□□ -1.64
PRPF4B-205ENST00000480058 LINC00205P59089 165 aa4.83□□□□□ -1.64
PRPF4B-205ENST00000480058 HEATR5AQ86XA9 2040 aa4.83□□□□□ -1.64
PRPF4B-205ENST00000480058 FREM1Q5H8C1 2179 aa4.83□□□□□ -1.64
PRPF4B-205ENST00000480058 NUPR1O60356 82 aa4.83□□□□□ -1.64
PRPF4B-205ENST00000480058 HAMPP81172 84 aa4.83□□□□□ -1.64
PRPF4B-205ENST00000480058 ODF1Q14990 250 aa4.83□□□□□ -1.64
PRPF4B-205ENST00000480058 LINC01356Q8N9X3 169 aa4.83□□□□□ -1.64
PRPF4B-205ENST00000480058 LCTP09848 1927 aa4.83□□□□□ -1.64
PRPF4B-205ENST00000480058 PATJQ8NI35 1801 aa4.82□□□□□ -1.64
PRPF4B-205ENST00000480058 IGHV3-64A0A075B6Q5 118 aa4.82□□□□□ -1.64
PRPF4B-205ENST00000480058 A4D1N5 150 aa4.82□□□□□ -1.64
PRPF4B-205ENST00000480058 NDUFC2O95298 119 aa4.82□□□□□ -1.64
PRPF4B-205ENST00000480058 BAALC-AS2P0C853 105 aa4.82□□□□□ -1.64
PRPF4B-205ENST00000480058 DSCR8Q96T75 97 aa4.82□□□□□ -1.64
PRPF4B-205ENST00000480058 OPRPNQ99935 248 aaPredicted RBP4.82□□□□□ -1.64
PRPF4B-205ENST00000480058 USP9XQ93008 2570 aaPredicted RBP4.82□□□□□ -1.64
PRPF4B-205ENST00000480058 PHF3Q92576 2039 aaKnown RBP4.82□□□□□ -1.64
PRPF4B-205ENST00000480058 F6UB75 175 aa4.82□□□□□ -1.64
PRPF4B-205ENST00000480058 CTSGP08311 255 aa4.82□□□□□ -1.64
PRPF4B-205ENST00000480058 COL8A2P25067 703 aa4.82□□□□□ -1.64
PRPF4B-205ENST00000480058 FXYD2P54710 66 aa4.82□□□□□ -1.64
PRPF4B-205ENST00000480058 FXYD7P58549 80 aa4.82□□□□□ -1.64
PRPF4B-205ENST00000480058 ZFP2Q6ZN57 461 aa4.82□□□□□ -1.64
PRPF4B-205ENST00000480058 IGHV3OR16-10A0A075B7F0 116 aa4.82□□□□□ -1.64
PRPF4B-205ENST00000480058 TRAV25A0A0B4J276 109 aa4.82□□□□□ -1.64
PRPF4B-205ENST00000480058 C20orf203Q8NBC4 194 aa4.82□□□□□ -1.64
PRPF4B-205ENST00000480058 ZNF524Q96C55 264 aa4.82□□□□□ -1.64
PRPF4B-205ENST00000480058 ODF3Q96PU9 254 aa4.82□□□□□ -1.64
PRPF4B-205ENST00000480058 RGPD3A6NKT7 1758 aaPredicted RBP4.82□□□□□ -1.64
PRPF4B-205ENST00000480058 ADAMTSL1Q8N6G6 1762 aa4.82□□□□□ -1.64
PRPF4B-205ENST00000480058 IGKV3D-20A0A0C4DH25 116 aa4.81□□□□□ -1.64
PRPF4B-205ENST00000480058 CRLF1O75462 422 aa4.81□□□□□ -1.64
PRPF4B-205ENST00000480058 YPEL4Q96NS1 127 aa4.81□□□□□ -1.64
PRPF4B-205ENST00000480058 VSIG2Q96IQ7 327 aa4.81□□□□□ -1.64
PRPF4B-205ENST00000480058 NDPQ00604 133 aa4.81□□□□□ -1.64
PRPF4B-205ENST00000480058 MSRB2Q9Y3D2 182 aa4.81□□□□□ -1.64
PRPF4B-205ENST00000480058 POLR2AP24928 1970 aaKnown RBP4.81□□□□□ -1.64
PRPF4B-205ENST00000480058 WI2-2373I1.2A0A1W2PRP0 233 aa4.81□□□□□ -1.64
PRPF4B-205ENST00000480058 ZNF561-AS1K7EIQ3 104 aa4.81□□□□□ -1.64
PRPF4B-205ENST00000480058 FUSP35637 526 aaKnown RBP eCLIP4.81□□□□□ -1.641e-8■■■■□ 25.3
PRPF4B-205ENST00000480058 DUX4L9Q6RFH8 374 aaPredicted RBP4.81□□□□□ -1.64
PRPF4B-205ENST00000480058 FAM215AQ9Y5M1 114 aa4.81□□□□□ -1.64
PRPF4B-205ENST00000480058 DOCK5Q9H7D0 1870 aa4.81□□□□□ -1.64
PRPF4B-205ENST00000480058 CDK2AP2O75956 126 aa4.81□□□□□ -1.64
PRPF4B-205ENST00000480058 ZNRF2Q8NHG8 242 aa4.81□□□□□ -1.64
PRPF4B-205ENST00000480058 LY6G6EA0A0G2JKS1 128 aa4.8□□□□□ -1.64
PRPF4B-205ENST00000480058 UQCRQO14949 82 aa4.8□□□□□ -1.64
PRPF4B-205ENST00000480058 C8orf49Q96NF6 230 aa4.8□□□□□ -1.64
PRPF4B-205ENST00000480058 SPANXB1Q9NS25 103 aaPredicted RBP4.8□□□□□ -1.64
PRPF4B-205ENST00000480058 U3KQA8 63 aa4.8□□□□□ -1.64
PRPF4B-205ENST00000480058 CASP8AP2Q9UKL3 1982 aa4.8□□□□□ -1.64
PRPF4B-205ENST00000480058 CENPVL3A0A0U1RRI6 287 aa4.8□□□□□ -1.64
PRPF4B-205ENST00000480058 FBXL19-AS1Q494R0 122 aa4.8□□□□□ -1.64
PRPF4B-205ENST00000480058 DYNAPQ8N1N2 210 aa4.8□□□□□ -1.64
PRPF4B-205ENST00000480058 DPH3Q96FX2 82 aa4.8□□□□□ -1.64
PRPF4B-205ENST00000480058 BPESC1Q9GZL8 116 aa4.8□□□□□ -1.64
PRPF4B-205ENST00000480058 KNCNA6PVL3 124 aa4.8□□□□□ -1.64
PRPF4B-205ENST00000480058 SAP30O75446 220 aa4.8□□□□□ -1.64
PRPF4B-205ENST00000480058 IGLC6P0CF74 106 aa4.8□□□□□ -1.64
PRPF4B-205ENST00000480058 DAZ2Q13117 558 aaKnown RBP4.8□□□□□ -1.64
PRPF4B-205ENST00000480058 DAZ4Q86SG3 579 aaKnown RBP4.8□□□□□ -1.64
PRPF4B-205ENST00000480058 TOMM6Q96B49 74 aa4.8□□□□□ -1.64
PRPF4B-205ENST00000480058 DAZ3Q9NR90 486 aaKnown RBP4.8□□□□□ -1.64
PRPF4B-205ENST00000480058 A0A0J9YXV3 536 aa4.8□□□□□ -1.64
PRPF4B-205ENST00000480058 RBM3P98179 157 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 213 ms