RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 SPCS2Q15005 226 aa6.26□□□□□ -1.41
GPNMB-211ENST00000479625 RHOHQ15669 191 aa6.26□□□□□ -1.41
GPNMB-211ENST00000479625 FAM159AQ6UWV7 190 aa6.26□□□□□ -1.41
GPNMB-211ENST00000479625 Q8N976 141 aa6.26□□□□□ -1.41
GPNMB-211ENST00000479625 TRIM63Q969Q1 353 aa6.26□□□□□ -1.41
GPNMB-211ENST00000479625 GTSF1LQ9H1H1 148 aa6.26□□□□□ -1.41
GPNMB-211ENST00000479625 TMEM14CQ9P0S9 112 aa6.26□□□□□ -1.41
GPNMB-211ENST00000479625 UBE2L5PA0A1B0GUS4 154 aa6.25□□□□□ -1.41
GPNMB-211ENST00000479625 C9orf170A2RU37 121 aa6.25□□□□□ -1.41
GPNMB-211ENST00000479625 C7orf66A4D0T2 115 aa6.25□□□□□ -1.41
GPNMB-211ENST00000479625 PANO1I0J062 215 aa6.25□□□□□ -1.41
GPNMB-211ENST00000479625 GAS8-AS1O95177 125 aa6.25□□□□□ -1.41
GPNMB-211ENST00000479625 TYMSP04818 313 aa6.25□□□□□ -1.41
GPNMB-211ENST00000479625 FAUP35544 74 aaKnown RBP6.25□□□□□ -1.41
GPNMB-211ENST00000479625 GCSAMLQ5JQS6 135 aa6.25□□□□□ -1.41
GPNMB-211ENST00000479625 Q6AWC8 147 aa6.25□□□□□ -1.41
GPNMB-211ENST00000479625 PHYHIPLQ96FC7 376 aa6.25□□□□□ -1.41
GPNMB-211ENST00000479625 GGACTQ9BVM4 153 aa6.25□□□□□ -1.41
GPNMB-211ENST00000479625 SLC25A2Q9BXI2 301 aa6.25□□□□□ -1.41
GPNMB-211ENST00000479625 SLC39A9Q9NUM3 307 aa6.25□□□□□ -1.41
GPNMB-211ENST00000479625 RSL24D1Q9UHA3 163 aaKnown RBP6.25□□□□□ -1.41
GPNMB-211ENST00000479625 TRBV6-4A0A1B0GX49 114 aa6.24□□□□□ -1.41
GPNMB-211ENST00000479625 GGTLC3B5MD39 225 aa6.24□□□□□ -1.41
GPNMB-211ENST00000479625 CST7O76096 145 aa6.24□□□□□ -1.41
GPNMB-211ENST00000479625 IAH1Q2TAA2 248 aaPredicted RBP6.24□□□□□ -1.41
GPNMB-211ENST00000479625 VWC2Q2TAL6 325 aa6.24□□□□□ -1.41
GPNMB-211ENST00000479625 DPPA3Q6W0C5 159 aa6.24□□□□□ -1.41
GPNMB-211ENST00000479625 Q6ZRU5 148 aa6.24□□□□□ -1.41
GPNMB-211ENST00000479625 PRADC1Q9BSG0 188 aa6.24□□□□□ -1.41
GPNMB-211ENST00000479625 GPN1Q9HCN4 374 aaPredicted RBP6.24□□□□□ -1.41
GPNMB-211ENST00000479625 WDR83OSQ9Y284 106 aa6.24□□□□□ -1.41
GPNMB-211ENST00000479625 TRBV7-9A0A0J9YWB2 115 aa6.23□□□□□ -1.41
GPNMB-211ENST00000479625 SMIM18P0DKX4 95 aa6.23□□□□□ -1.41
GPNMB-211ENST00000479625 TAS2R30P59541 319 aa6.23□□□□□ -1.41
GPNMB-211ENST00000479625 BAXQ07812 192 aa6.23□□□□□ -1.41
GPNMB-211ENST00000479625 RAB31Q13636 194 aa6.23□□□□□ -1.41
GPNMB-211ENST00000479625 TOR2AQ5JU69 321 aa6.23□□□□□ -1.41
GPNMB-211ENST00000479625 CFAP126Q5VTH2 177 aa6.23□□□□□ -1.41
GPNMB-211ENST00000479625 MIR17HGQ75NE6 70 aa6.23□□□□□ -1.41
GPNMB-211ENST00000479625 TOMM5Q8N4H5 51 aa6.23□□□□□ -1.41
GPNMB-211ENST00000479625 C12orf45Q8N5I9 185 aaPredicted RBP6.23□□□□□ -1.41
GPNMB-211ENST00000479625 SLC25A21Q9BQT8 299 aaPredicted RBP6.23□□□□□ -1.41
GPNMB-211ENST00000479625 CDIP1Q9H305 208 aa6.23□□□□□ -1.41
GPNMB-211ENST00000479625 GSKIPQ9P0R6 139 aa6.23□□□□□ -1.41
GPNMB-211ENST00000479625 RABL2AQ9UBK7 228 aaPredicted RBP6.23□□□□□ -1.41
GPNMB-211ENST00000479625 COX11Q9Y6N1 276 aa6.23□□□□□ -1.41
GPNMB-211ENST00000479625 GAGE12JA6NER3 117 aa6.22□□□□□ -1.41
GPNMB-211ENST00000479625 F6UZH7 168 aa6.22□□□□□ -1.41
GPNMB-211ENST00000479625 MBPP02686 304 aaPredicted RBP6.22□□□□□ -1.41
GPNMB-211ENST00000479625 OR10J4P0C629 311 aa6.22□□□□□ -1.41
GPNMB-211ENST00000479625 LINC00694P0DN24 101 aa6.22□□□□□ -1.41
GPNMB-211ENST00000479625 RPL29P47914 159 aaKnown RBP6.22□□□□□ -1.41
GPNMB-211ENST00000479625 GAGE1Q13065 139 aa6.22□□□□□ -1.41
GPNMB-211ENST00000479625 GAGE4Q13068 117 aa6.22□□□□□ -1.41
GPNMB-211ENST00000479625 GAGE5Q13069 117 aa6.22□□□□□ -1.41
GPNMB-211ENST00000479625 GAGE13Q4V321 117 aa6.22□□□□□ -1.41
GPNMB-211ENST00000479625 NUDT10Q8NFP7 164 aa6.22□□□□□ -1.41
GPNMB-211ENST00000479625 RMI2Q96E14 147 aa6.22□□□□□ -1.41
GPNMB-211ENST00000479625 NUDT11Q96G61 164 aa6.22□□□□□ -1.41
GPNMB-211ENST00000479625 FAM167A-AS1Q96KT0 104 aa6.22□□□□□ -1.41
GPNMB-211ENST00000479625 PAXXQ9BUH6 204 aa6.22□□□□□ -1.41
GPNMB-211ENST00000479625 UQCC1Q9NVA1 299 aa6.22□□□□□ -1.41
GPNMB-211ENST00000479625 Q9UF83 564 aa6.22□□□□□ -1.41
GPNMB-211ENST00000479625 KLK12Q9UKR0 248 aa6.22□□□□□ -1.41
GPNMB-211ENST00000479625 MUC2Q02817 5179 aa6.21□□□□□ -1.42
GPNMB-211ENST00000479625 TRAV8-1A0A0A6YYK1 113 aa6.21□□□□□ -1.42
GPNMB-211ENST00000479625 CCSO14618 274 aa6.21□□□□□ -1.42
GPNMB-211ENST00000479625 NBEAP1P0C6P0 100 aa6.21□□□□□ -1.42
GPNMB-211ENST00000479625 BCAP31P51572 246 aa6.21□□□□□ -1.42
GPNMB-211ENST00000479625 ZNF876PQ49A33 203 aa6.21□□□□□ -1.42
GPNMB-211ENST00000479625 DYNC2LI1Q8TCX1 351 aa6.21□□□□□ -1.42
GPNMB-211ENST00000479625 UBE2WQ96B02 151 aa6.21□□□□□ -1.42
GPNMB-211ENST00000479625 FXYD5Q96DB9 178 aa6.21□□□□□ -1.42
GPNMB-211ENST00000479625 FLVCR2Q9UPI3 526 aa6.21□□□□□ -1.42
GPNMB-211ENST00000479625 LSM5Q9Y4Y9 91 aaKnown RBP6.21□□□□□ -1.42
GPNMB-211ENST00000479625 FAM24AA6NFZ4 105 aa6.2□□□□□ -1.42
GPNMB-211ENST00000479625 L7N2F9 121 aa6.2□□□□□ -1.42
GPNMB-211ENST00000479625 FGF7P21781 194 aa6.2□□□□□ -1.42
GPNMB-211ENST00000479625 AP3S2P59780 193 aa6.2□□□□□ -1.42
GPNMB-211ENST00000479625 VAMP2P63027 116 aa6.2□□□□□ -1.42
GPNMB-211ENST00000479625 NIT1Q86X76 327 aa6.2□□□□□ -1.42
GPNMB-211ENST00000479625 OR51M1Q9H341 326 aa6.2□□□□□ -1.42
GPNMB-211ENST00000479625 SDF2L1Q9HCN8 221 aa6.2□□□□□ -1.42
GPNMB-211ENST00000479625 FAT4Q6V0I7 4981 aa6.2□□□□□ -1.42
GPNMB-211ENST00000479625 RBAKDNA6NC62 111 aa6.19□□□□□ -1.42
GPNMB-211ENST00000479625 MGST1P10620 155 aaKnown RBP6.19□□□□□ -1.42
GPNMB-211ENST00000479625 INPP1P49441 399 aa6.19□□□□□ -1.42
GPNMB-211ENST00000479625 RANP62826 216 aaKnown RBP6.19□□□□□ -1.42
GPNMB-211ENST00000479625 PYDC2Q56P42 97 aa6.19□□□□□ -1.42
GPNMB-211ENST00000479625 ZNF506Q5JVG8 444 aa6.19□□□□□ -1.42
GPNMB-211ENST00000479625 C11orf1Q9H5F2 150 aa6.19□□□□□ -1.42
GPNMB-211ENST00000479625 URGCP-MRPS24S4R325 110 aa6.19□□□□□ -1.42
GPNMB-211ENST00000479625 TRAV21A0A0B4J279 112 aa6.18□□□□□ -1.42
GPNMB-211ENST00000479625 IGSF23A1L1A6 192 aa6.18□□□□□ -1.42
GPNMB-211ENST00000479625 PGPEP1LA6NFU8 196 aa6.18□□□□□ -1.42
GPNMB-211ENST00000479625 DIRC3C9JPN6 131 aa6.18□□□□□ -1.42
GPNMB-211ENST00000479625 HLA-DQA1P01909 254 aa6.18□□□□□ -1.42
GPNMB-211ENST00000479625 CSN1S1P47710 185 aa6.18□□□□□ -1.42
GPNMB-211ENST00000479625 ATRAIDQ6UW56 229 aa6.18□□□□□ -1.42
GPNMB-211ENST00000479625 CYB561D1Q8N8Q1 229 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms