RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 LY6G6CO95867 125 aa14.5□□□□□ -0.09
VARS-224ENST00000479051 ALKAL2Q6UX46 152 aa14.5□□□□□ -0.09
VARS-224ENST00000479051 TXNDC17Q9BRA2 123 aa14.5□□□□□ -0.09
VARS-224ENST00000479051 TRGV2A0A075B6R0 118 aa14.49□□□□□ -0.09
VARS-224ENST00000479051 TRBV6-1A0A0K0K1D8 114 aa14.49□□□□□ -0.09
VARS-224ENST00000479051 LGALS9BQ3B8N2 356 aa14.49□□□□□ -0.09
VARS-224ENST00000479051 Q6ZTI0 123 aa14.49□□□□□ -0.09
VARS-224ENST00000479051 DYNC2H1Q8NCM8 4307 aaKnown RBP14.49□□□□□ -0.09
VARS-224ENST00000479051 KMT2CQ8NEZ4 4911 aaKnown RBP14.49□□□□□ -0.09
VARS-224ENST00000479051 SPINK4O60575 86 aa14.48□□□□□ -0.09
VARS-224ENST00000479051 ZNF80P51504 273 aaPredicted RBP14.48□□□□□ -0.09
VARS-224ENST00000479051 CCL20P78556 96 aa14.48□□□□□ -0.09
VARS-224ENST00000479051 LGALS9CQ6DKI2 356 aa14.48□□□□□ -0.09
VARS-224ENST00000479051 SPXQ9BT56 116 aa14.48□□□□□ -0.09
VARS-224ENST00000479051 SCO2A0A1W2PP80 73 aa14.47□□□□□ -0.09
VARS-224ENST00000479051 BLOC1S1P78537 153 aa14.47□□□□□ -0.09
VARS-224ENST00000479051 MDFICQ9P1T7 246 aa14.47□□□□□ -0.09
VARS-224ENST00000479051 FABP5P3A8MUU1 101 aa14.46□□□□□ -0.09
VARS-224ENST00000479051 TAGLN2P37802 199 aaKnown RBP14.46□□□□□ -0.09
VARS-224ENST00000479051 TMEM88Q6PEY1 159 aa14.46□□□□□ -0.09
VARS-224ENST00000479051 C15orf53Q8NAA6 179 aa14.46□□□□□ -0.09
VARS-224ENST00000479051 BOLA1Q9Y3E2 137 aa14.46□□□□□ -0.09
VARS-224ENST00000479051 GNRH2O43555 120 aa14.45□□□□□ -0.1
VARS-224ENST00000479051 LTAP01374 205 aa14.45□□□□□ -0.1
VARS-224ENST00000479051 TYMSP04818 313 aa14.45□□□□□ -0.1
VARS-224ENST00000479051 C18orf15Q96N68 181 aa14.45□□□□□ -0.1
VARS-224ENST00000479051 MRPL16Q9NX20 251 aaKnown RBP14.45□□□□□ -0.1
VARS-224ENST00000479051 IGHV3-16A0A0C4DH30 117 aa14.44□□□□□ -0.1
VARS-224ENST00000479051 COX8CQ7Z4L0 72 aa14.44□□□□□ -0.1
VARS-224ENST00000479051 PDE6DO43924 150 aa14.43□□□□□ -0.1
VARS-224ENST00000479051 BCL2P10415 239 aa14.43□□□□□ -0.1
VARS-224ENST00000479051 MEF2BQ02080 365 aaPredicted RBP14.43□□□□□ -0.1
VARS-224ENST00000479051 OR5I1Q13606 314 aa14.43□□□□□ -0.1
VARS-224ENST00000479051 FAM162BQ5T6X4 162 aa14.43□□□□□ -0.1
VARS-224ENST00000479051 ZC2HC1AQ96GY0 325 aa14.43□□□□□ -0.1
VARS-224ENST00000479051 PLECQ15149 4684 aaKnown RBP14.42□□□□□ -0.1
VARS-224ENST00000479051 ALMS1Q8TCU4 4167 aa14.42□□□□□ -0.1
VARS-224ENST00000479051 M0R2P5 195 aa14.42□□□□□ -0.1
VARS-224ENST00000479051 P0DMU3 169 aa14.42□□□□□ -0.1
VARS-224ENST00000479051 FAM231AP0DMU4 169 aa14.42□□□□□ -0.1
VARS-224ENST00000479051 FAM231CP0DMU5 169 aa14.42□□□□□ -0.1
VARS-224ENST00000479051 BAGE2Q86Y30 109 aa14.42□□□□□ -0.1
VARS-224ENST00000479051 C11orf52Q96A22 123 aa14.42□□□□□ -0.1
VARS-224ENST00000479051 C11orf21Q9P2W6 132 aa14.42□□□□□ -0.1
VARS-224ENST00000479051 VAX2Q9UIW0 290 aa14.42□□□□□ -0.1
VARS-224ENST00000479051 LYSTQ99698 3801 aa14.42□□□□□ -0.1
VARS-224ENST00000479051 ORM1P02763 201 aa14.41□□□□□ -0.1
VARS-224ENST00000479051 SH2D1AO60880 128 aa14.4□□□□□ -0.1
VARS-224ENST00000479051 S100A4P26447 101 aaKnown RBP14.4□□□□□ -0.1
VARS-224ENST00000479051 RPL35P42766 123 aaKnown RBP14.4□□□□□ -0.1
VARS-224ENST00000479051 RASL10AQ92737 203 aa14.4□□□□□ -0.1
VARS-224ENST00000479051 B4DEV8 164 aa14.39□□□□□ -0.11
VARS-224ENST00000479051 TRAV26-1A0A087WT03 109 aa14.38□□□□□ -0.11
VARS-224ENST00000479051 NUDT3O95989 172 aa14.38□□□□□ -0.11
VARS-224ENST00000479051 HOXA5P20719 270 aa14.38□□□□□ -0.11
VARS-224ENST00000479051 ASIPP42127 132 aa14.38□□□□□ -0.11
VARS-224ENST00000479051 CRIP1P50238 77 aa14.38□□□□□ -0.11
VARS-224ENST00000479051 ZNF674Q2M3X9 581 aa14.38□□□□□ -0.11
VARS-224ENST00000479051 UBE2DNLQ8IWF7 75 aa14.38□□□□□ -0.11
VARS-224ENST00000479051 NHLRC2Q8NBF2 726 aa14.38□□□□□ -0.11
VARS-224ENST00000479051 MED9Q9NWA0 146 aa14.38□□□□□ -0.11
VARS-224ENST00000479051 IGKV3D-20A0A0C4DH25 116 aa14.37□□□□□ -0.11
VARS-224ENST00000479051 IGHV3-53P01767 116 aa14.37□□□□□ -0.11
VARS-224ENST00000479051 SLAQ13239 276 aa14.37□□□□□ -0.11
VARS-224ENST00000479051 H3BNG1 76 aa14.36□□□□□ -0.11
VARS-224ENST00000479051 M0R036 132 aa14.36□□□□□ -0.11
VARS-224ENST00000479051 LYPD6BQ8NI32 183 aa14.36□□□□□ -0.11
VARS-224ENST00000479051 C9orf85Q96MD7 179 aa14.36□□□□□ -0.11
VARS-224ENST00000479051 SACSQ9NZJ4 4579 aa14.35□□□□□ -0.11
VARS-224ENST00000479051 TRAV4A0A0B4J268 109 aa14.35□□□□□ -0.11
VARS-224ENST00000479051 TRGV4A0A0C4DH28 118 aa14.35□□□□□ -0.11
VARS-224ENST00000479051 A0A0J9YY99 117 aa14.35□□□□□ -0.11
VARS-224ENST00000479051 KRBOX1C9JBD0 128 aa14.35□□□□□ -0.11
VARS-224ENST00000479051 C9JCJ5 164 aa14.35□□□□□ -0.11
VARS-224ENST00000479051 LINC01559Q495D7 138 aa14.35□□□□□ -0.11
VARS-224ENST00000479051 POM121L12Q8N7R1 296 aa14.35□□□□□ -0.11
VARS-224ENST00000479051 OR4C5Q8NGB2 326 aa14.35□□□□□ -0.11
VARS-224ENST00000479051 DERL1Q9BUN8 251 aa14.35□□□□□ -0.11
VARS-224ENST00000479051 MLST8Q9BVC4 326 aa14.35□□□□□ -0.11
VARS-224ENST00000479051 DNAH1Q9P2D7 4330 aa14.35□□□□□ -0.11
VARS-224ENST00000479051 RBFOX3A6NFN3 312 aa14.34□□□□□ -0.11
VARS-224ENST00000479051 RNASE3P12724 160 aaKnown RBP14.34□□□□□ -0.11
VARS-224ENST00000479051 GNG4P50150 75 aa14.34□□□□□ -0.11
VARS-224ENST00000479051 ZNF876PQ49A33 203 aa14.34□□□□□ -0.11
VARS-224ENST00000479051 CENPWQ5EE01 88 aa14.34□□□□□ -0.11
VARS-224ENST00000479051 PRR27Q6MZM9 219 aa14.34□□□□□ -0.11
VARS-224ENST00000479051 SMIM12Q96EX1 92 aa14.34□□□□□ -0.11
VARS-224ENST00000479051 MUC4Q99102 2169 aa14.33□□□□□ -0.11
VARS-224ENST00000479051 RNF212Q495C1 297 aa14.33□□□□□ -0.12
VARS-224ENST00000479051 PTH2Q96A98 100 aa14.33□□□□□ -0.12
VARS-224ENST00000479051 IL36BQ9NZH7 164 aa14.33□□□□□ -0.12
VARS-224ENST00000479051 PRO0255Q9UI72 69 aa14.33□□□□□ -0.12
VARS-224ENST00000479051 PAX4O43316 350 aa14.32□□□□□ -0.12
VARS-224ENST00000479051 DNLZQ5SXM8 178 aa14.32□□□□□ -0.12
VARS-224ENST00000479051 TEX261Q6UWH6 196 aa14.32□□□□□ -0.12
VARS-224ENST00000479051 BIN3Q9NQY0 253 aa14.32□□□□□ -0.12
VARS-224ENST00000479051 HHLA3Q9XRX5 114 aa14.32□□□□□ -0.12
VARS-224ENST00000479051 TMSB15BA0A087X1C1 80 aa14.31□□□□□ -0.12
VARS-224ENST00000479051 H3BVH4 76 aa14.31□□□□□ -0.12
VARS-224ENST00000479051 CIDEAO60543 219 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms