RNA–Protein interactions for RNA: ENST00000478916.5

SYNE1-224, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 2

Gene SYNE1, Length 7,780 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-224ENST00000478916 MED12Q93074 2177 aa7□□□□□ -1.29
SYNE1-224ENST00000478916 ZNF833PQ6ZTB9 187 aa7□□□□□ -1.29
SYNE1-224ENST00000478916 ZNF747Q9BV97 191 aa7□□□□□ -1.29
SYNE1-224ENST00000478916 XCL2Q9UBD3 114 aa7□□□□□ -1.29
SYNE1-224ENST00000478916 ICOSQ9Y6W8 199 aa7□□□□□ -1.29
SYNE1-224ENST00000478916 ATP5G1P05496 136 aa7□□□□□ -1.29
SYNE1-224ENST00000478916 ZNF726P1Q15940 193 aa7□□□□□ -1.29
SYNE1-224ENST00000478916 KIAA1671Q9BY89 1806 aa7□□□□□ -1.29
SYNE1-224ENST00000478916 TNRC6AQ8NDV7 1962 aaKnown RBP7□□□□□ -1.29
SYNE1-224ENST00000478916 TRAV12-2A0A075B6T6 113 aa7□□□□□ -1.29
SYNE1-224ENST00000478916 LMO1P25800 156 aa7□□□□□ -1.29
SYNE1-224ENST00000478916 POLEQ07864 2286 aa7□□□□□ -1.29
SYNE1-224ENST00000478916 DOPEY2Q9Y3R5 2298 aa7□□□□□ -1.29
SYNE1-224ENST00000478916 C22orf46C9J442 243 aa7□□□□□ -1.29
SYNE1-224ENST00000478916 IGF2-ASQ6U949 168 aa7□□□□□ -1.29
SYNE1-224ENST00000478916 PCP2Q8IVA1 136 aa7□□□□□ -1.29
SYNE1-224ENST00000478916 SLC25A29Q8N8R3 303 aa7□□□□□ -1.29
SYNE1-224ENST00000478916 ZC2HC1AQ96GY0 325 aa7□□□□□ -1.29
SYNE1-224ENST00000478916 NDUFB1O75438 58 aa7□□□□□ -1.29
SYNE1-224ENST00000478916 ZNF134P52741 427 aa7□□□□□ -1.29
SYNE1-224ENST00000478916 IGFBPL1Q8WX77 278 aa7□□□□□ -1.29
SYNE1-224ENST00000478916 FAM215AQ9Y5M1 114 aa7□□□□□ -1.29
SYNE1-224ENST00000478916 ZFP2Q6ZN57 461 aa7□□□□□ -1.29
SYNE1-224ENST00000478916 DYNAPQ8N1N2 210 aa7□□□□□ -1.29
SYNE1-224ENST00000478916 NDUFA4L2Q9NRX3 87 aa7□□□□□ -1.29
SYNE1-224ENST00000478916 LHBP01229 141 aa6.99□□□□□ -1.29
SYNE1-224ENST00000478916 IGLV1-44P01699 117 aa6.99□□□□□ -1.29
SYNE1-224ENST00000478916 DUX4L9Q6RFH8 374 aaPredicted RBP6.99□□□□□ -1.29
SYNE1-224ENST00000478916 ZMAT4Q9H898 229 aa6.99□□□□□ -1.29
SYNE1-224ENST00000478916 PROK2Q9HC23 129 aa6.99□□□□□ -1.29
SYNE1-224ENST00000478916 Q6ZVH6 145 aa6.99□□□□□ -1.29
SYNE1-224ENST00000478916 WIPF2Q8TF74 440 aaPredicted RBP6.99□□□□□ -1.29
SYNE1-224ENST00000478916 VSIG2Q96IQ7 327 aa6.99□□□□□ -1.29
SYNE1-224ENST00000478916 Q9H8V8 135 aa6.99□□□□□ -1.29
SYNE1-224ENST00000478916 H3BRN7 92 aa6.99□□□□□ -1.29
SYNE1-224ENST00000478916 ANGP03950 147 aaKnown RBP6.99□□□□□ -1.29
SYNE1-224ENST00000478916 G3V4G9 280 aa6.99□□□□□ -1.29
SYNE1-224ENST00000478916 PROP1O75360 226 aa6.99□□□□□ -1.29
SYNE1-224ENST00000478916 NREPQ16612 68 aa6.99□□□□□ -1.29
SYNE1-224ENST00000478916 FRMPD3Q5JV73 1810 aa6.99□□□□□ -1.29
SYNE1-224ENST00000478916 TAX1BP3O14907 124 aa6.99□□□□□ -1.29
SYNE1-224ENST00000478916 CGB3P0DN86 165 aa6.99□□□□□ -1.29
SYNE1-224ENST00000478916 LINC00311Q8N616 119 aa6.99□□□□□ -1.29
SYNE1-224ENST00000478916 DOCK8Q8NF50 2099 aa6.99□□□□□ -1.29
SYNE1-224ENST00000478916 NDUFA4O00483 81 aa6.99□□□□□ -1.29
SYNE1-224ENST00000478916 LOXP28300 417 aaPredicted RBP6.99□□□□□ -1.29
SYNE1-224ENST00000478916 TRAV26-1A0A087WT03 109 aa6.98□□□□□ -1.29
SYNE1-224ENST00000478916 FOXI1Q12951 378 aa6.98□□□□□ -1.29
SYNE1-224ENST00000478916 DOCK7Q96N67 2140 aa6.98□□□□□ -1.29
SYNE1-224ENST00000478916 SLX1AQ9BQ83 275 aa6.98□□□□□ -1.29
SYNE1-224ENST00000478916 KLF2Q9Y5W3 355 aaPredicted RBP6.98□□□□□ -1.29
SYNE1-224ENST00000478916 ELANEP08246 267 aa6.98□□□□□ -1.29
SYNE1-224ENST00000478916 RNASE13Q5GAN3 156 aaKnown RBP6.98□□□□□ -1.29
SYNE1-224ENST00000478916 C11orf52Q96A22 123 aa6.98□□□□□ -1.29
SYNE1-224ENST00000478916 SPTSSBQ8NFR3 76 aa6.98□□□□□ -1.29
SYNE1-224ENST00000478916 RNASE8Q8TDE3 154 aaKnown RBP6.98□□□□□ -1.29
SYNE1-224ENST00000478916 Q6ZR03 302 aa6.98□□□□□ -1.29
SYNE1-224ENST00000478916 COX7B2Q8TF08 81 aa6.98□□□□□ -1.29
SYNE1-224ENST00000478916 IGLV3-9A0A075B6K5 115 aa6.98□□□□□ -1.29
SYNE1-224ENST00000478916 WFDC2Q14508 124 aa6.98□□□□□ -1.29
SYNE1-224ENST00000478916 DEFB113Q30KQ7 82 aa6.98□□□□□ -1.29
SYNE1-224ENST00000478916 VOPP1Q96AW1 172 aa6.98□□□□□ -1.29
SYNE1-224ENST00000478916 RIF1Q5UIP0 2472 aaKnown RBP6.98□□□□□ -1.29
SYNE1-224ENST00000478916 TSC2P49815 1807 aa6.97□□□□□ -1.29
SYNE1-224ENST00000478916 WISP1O95388 367 aa6.97□□□□□ -1.29
SYNE1-224ENST00000478916 CGB7P0DN87 165 aa6.97□□□□□ -1.29
SYNE1-224ENST00000478916 UBE2BP63146 152 aa6.97□□□□□ -1.29
SYNE1-224ENST00000478916 RNF144BQ7Z419 303 aa6.97□□□□□ -1.29
SYNE1-224ENST00000478916 ZNF581Q9P0T4 197 aa6.97□□□□□ -1.29
SYNE1-224ENST00000478916 IGHV4-28A0A0C4DH34 117 aa6.97□□□□□ -1.29
SYNE1-224ENST00000478916 K7EM74 188 aa6.97□□□□□ -1.29
SYNE1-224ENST00000478916 V9GYY9 64 aa6.97□□□□□ -1.29
SYNE1-224ENST00000478916 COL6A6A6NMZ7 2263 aa6.97□□□□□ -1.29
SYNE1-224ENST00000478916 WDR81Q562E7 1941 aa6.97□□□□□ -1.29
SYNE1-224ENST00000478916 H3BUA1 57 aa6.97□□□□□ -1.29
SYNE1-224ENST00000478916 EML6Q6ZMW3 1958 aa6.97□□□□□ -1.29
SYNE1-224ENST00000478916 G3V318 75 aa6.97□□□□□ -1.29
SYNE1-224ENST00000478916 CRYGBP07316 175 aa6.97□□□□□ -1.29
SYNE1-224ENST00000478916 ETDCA0A1B0GVM5 59 aa6.96□□□□□ -1.29
SYNE1-224ENST00000478916 JMJD7-PLA2G4BH0Y9G9 81 aa6.96□□□□□ -1.29
SYNE1-224ENST00000478916 LINC01620Q4KN68 170 aa6.96□□□□□ -1.29
SYNE1-224ENST00000478916 ATP6V0E2Q8NHE4 81 aa6.96□□□□□ -1.29
SYNE1-224ENST00000478916 VPREB3Q9UKI3 123 aa6.96□□□□□ -1.29
SYNE1-224ENST00000478916 LTAP01374 205 aa6.96□□□□□ -1.29
SYNE1-224ENST00000478916 CDPF1Q6NVV7 123 aa6.96□□□□□ -1.29
SYNE1-224ENST00000478916 FXYD5Q96DB9 178 aa6.96□□□□□ -1.29
SYNE1-224ENST00000478916 IL15RAQ13261 267 aa6.96□□□□□ -1.3
SYNE1-224ENST00000478916 C17orf58Q2M2W7 97 aa6.96□□□□□ -1.3
SYNE1-224ENST00000478916 OPRPNQ99935 248 aaPredicted RBP6.96□□□□□ -1.3
SYNE1-224ENST00000478916 U3KQE9 123 aa6.96□□□□□ -1.3
SYNE1-224ENST00000478916 CLPSL2Q6UWE3 100 aa6.96□□□□□ -1.3
SYNE1-224ENST00000478916 MRPL53Q96EL3 112 aaKnown RBP6.96□□□□□ -1.3
SYNE1-224ENST00000478916 CADP27708 2225 aa6.96□□□□□ -1.3
SYNE1-224ENST00000478916 ZNRD1Q9P1U0 126 aa6.96□□□□□ -1.3
SYNE1-224ENST00000478916 KAAG1Q9UBP8 84 aa6.96□□□□□ -1.3
SYNE1-224ENST00000478916 PKIGQ9Y2B9 76 aa6.96□□□□□ -1.3
SYNE1-224ENST00000478916 IGKV1-39P01597 117 aa6.96□□□□□ -1.3
SYNE1-224ENST00000478916 IGKV1D-39P04432 117 aa6.96□□□□□ -1.3
SYNE1-224ENST00000478916 XCL1P47992 114 aa6.96□□□□□ -1.3
SYNE1-224ENST00000478916 K7EN84 100 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms