RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 RASL10AQ92737 203 aa12.94□□□□□ -0.34
SREBF1-212ENST00000478616 ATG101Q9BSB4 218 aa12.94□□□□□ -0.34
SREBF1-212ENST00000478616 TMEM167BQ9NRX6 74 aa12.94□□□□□ -0.34
SREBF1-212ENST00000478616 DNAH5Q8TE73 4624 aa12.94□□□□□ -0.34
SREBF1-212ENST00000478616 LRP1BQ9NZR2 4599 aa12.94□□□□□ -0.34
SREBF1-212ENST00000478616 A0A0D9SG52 128 aa12.93□□□□□ -0.34
SREBF1-212ENST00000478616 A0A1W2PRE2 83 aa12.93□□□□□ -0.34
SREBF1-212ENST00000478616 PRSS29PA6NIE9 313 aa12.93□□□□□ -0.34
SREBF1-212ENST00000478616 TMEM75Q8N9X5 138 aa12.93□□□□□ -0.34
SREBF1-212ENST00000478616 ZNF479Q96JC4 524 aa12.93□□□□□ -0.34
SREBF1-212ENST00000478616 TRAV21A0A0B4J279 112 aa12.92□□□□□ -0.34
SREBF1-212ENST00000478616 SFTA3P0C7M3 94 aa12.92□□□□□ -0.34
SREBF1-212ENST00000478616 CRYBA4P53673 196 aa12.92□□□□□ -0.34
SREBF1-212ENST00000478616 CCL18P55774 89 aa12.92□□□□□ -0.34
SREBF1-212ENST00000478616 FAM159AQ6UWV7 190 aa12.92□□□□□ -0.34
SREBF1-212ENST00000478616 UPK3BQ9BT76 320 aa12.92□□□□□ -0.34
SREBF1-212ENST00000478616 NAGKQ9UJ70 344 aa12.92□□□□□ -0.34
SREBF1-212ENST00000478616 TRAV34A0A0B4J273 112 aa12.91□□□□□ -0.34
SREBF1-212ENST00000478616 SERTM2A0A1B0GWG4 89 aa12.91□□□□□ -0.34
SREBF1-212ENST00000478616 FAM74A7A6NL05 159 aa12.91□□□□□ -0.34
SREBF1-212ENST00000478616 BCL2L11O43521 198 aa12.91□□□□□ -0.34
SREBF1-212ENST00000478616 FLI1Q01543 452 aaPredicted RBP12.91□□□□□ -0.34
SREBF1-212ENST00000478616 LGALSLQ3ZCW2 172 aaPredicted RBP12.91□□□□□ -0.34
SREBF1-212ENST00000478616 TMUB2Q71RG4 321 aa12.91□□□□□ -0.34
SREBF1-212ENST00000478616 CYB561D1Q8N8Q1 229 aa12.91□□□□□ -0.34
SREBF1-212ENST00000478616 TRGV11A0A075B6L2 103 aa12.9□□□□□ -0.34
SREBF1-212ENST00000478616 UBE2G2P60604 165 aa12.9□□□□□ -0.34
SREBF1-212ENST00000478616 ZNF575Q86XF7 245 aa12.9□□□□□ -0.34
SREBF1-212ENST00000478616 MRPS16Q9Y3D3 137 aaKnown RBP12.9□□□□□ -0.34
SREBF1-212ENST00000478616 KANTRA0A1W2PQU2 76 aa12.89□□□□□ -0.35
SREBF1-212ENST00000478616 GCGP01275 180 aa12.89□□□□□ -0.35
SREBF1-212ENST00000478616 ZFP69Q49AA0 526 aa12.89□□□□□ -0.35
SREBF1-212ENST00000478616 DPPA3Q6W0C5 159 aa12.89□□□□□ -0.35
SREBF1-212ENST00000478616 PRNTQ86SH4 94 aa12.89□□□□□ -0.35
SREBF1-212ENST00000478616 SPXQ9BT56 116 aa12.89□□□□□ -0.35
SREBF1-212ENST00000478616 Q9H8V8 135 aa12.89□□□□□ -0.35
SREBF1-212ENST00000478616 MAP1LC3B2A6NCE7 125 aa12.88□□□□□ -0.35
SREBF1-212ENST00000478616 CRIP1P50238 77 aa12.88□□□□□ -0.35
SREBF1-212ENST00000478616 AKR1C8PQ5T2L2 129 aa12.88□□□□□ -0.35
SREBF1-212ENST00000478616 C1orf134Q5TEV5 83 aa12.88□□□□□ -0.35
SREBF1-212ENST00000478616 IQCF2Q8IXL9 164 aa12.88□□□□□ -0.35
SREBF1-212ENST00000478616 MAP1LC3BQ9GZQ8 125 aa12.88□□□□□ -0.35
SREBF1-212ENST00000478616 PRO0255Q9UI72 69 aa12.88□□□□□ -0.35
SREBF1-212ENST00000478616 IGKV3D-20A0A0C4DH25 116 aa12.87□□□□□ -0.35
SREBF1-212ENST00000478616 PAX4O43316 350 aa12.87□□□□□ -0.35
SREBF1-212ENST00000478616 PFDN1O60925 122 aa12.87□□□□□ -0.35
SREBF1-212ENST00000478616 RNASE3P12724 160 aaKnown RBP12.87□□□□□ -0.35
SREBF1-212ENST00000478616 TNP2Q05952 138 aa12.87□□□□□ -0.35
SREBF1-212ENST00000478616 C9orf85Q96MD7 179 aa12.87□□□□□ -0.35
SREBF1-212ENST00000478616 ZNF471Q9BX82 626 aaPredicted RBP12.87□□□□□ -0.35
SREBF1-212ENST00000478616 HHLA3Q9XRX5 114 aa12.87□□□□□ -0.35
SREBF1-212ENST00000478616 ARL2-SNX15V9GYD0 113 aa12.87□□□□□ -0.35
SREBF1-212ENST00000478616 M0R2P5 195 aa12.86□□□□□ -0.35
SREBF1-212ENST00000478616 PEX7O00628 323 aa12.86□□□□□ -0.35
SREBF1-212ENST00000478616 PFN1P07737 140 aaKnown RBP12.86□□□□□ -0.35
SREBF1-212ENST00000478616 Q86TA4 180 aa12.86□□□□□ -0.35
SREBF1-212ENST00000478616 C9orf62Q8N4C0 152 aa12.86□□□□□ -0.35
SREBF1-212ENST00000478616 RYR1P21817 5038 aa12.86□□□□□ -0.35
SREBF1-212ENST00000478616 TRAV4A0A0B4J268 109 aa12.85□□□□□ -0.35
SREBF1-212ENST00000478616 MBD3L1Q8WWY6 194 aa12.85□□□□□ -0.35
SREBF1-212ENST00000478616 SDF2L1Q9HCN8 221 aa12.85□□□□□ -0.35
SREBF1-212ENST00000478616 LOC100131303A0A0U1RQF7 123 aa12.84□□□□□ -0.35
SREBF1-212ENST00000478616 K7EQD1 137 aa12.84□□□□□ -0.35
SREBF1-212ENST00000478616 SEC11BP0C7V7 166 aa12.84□□□□□ -0.35
SREBF1-212ENST00000478616 NKX2-5P52952 324 aaPredicted RBP12.84□□□□□ -0.35
SREBF1-212ENST00000478616 SMUG1Q53HV7 270 aa12.84□□□□□ -0.35
SREBF1-212ENST00000478616 COX8CQ7Z4L0 72 aa12.84□□□□□ -0.35
SREBF1-212ENST00000478616 C6orf223Q8N319 242 aa12.84□□□□□ -0.35
SREBF1-212ENST00000478616 NDFIP1Q9BT67 221 aa12.84□□□□□ -0.35
SREBF1-212ENST00000478616 APOBP04114 4563 aaKnown RBP12.83□□□□□ -0.36
SREBF1-212ENST00000478616 PGPEP1LA6NFU8 196 aa12.83□□□□□ -0.36
SREBF1-212ENST00000478616 LYPD5Q6UWN5 251 aa12.83□□□□□ -0.36
SREBF1-212ENST00000478616 STOML3Q8TAV4 291 aa12.83□□□□□ -0.36
SREBF1-212ENST00000478616 ZC2HC1AQ96GY0 325 aa12.83□□□□□ -0.36
SREBF1-212ENST00000478616 KCNS1Q96KK3 526 aa12.83□□□□□ -0.36
SREBF1-212ENST00000478616 ICOSQ9Y6W8 199 aa12.83□□□□□ -0.36
SREBF1-212ENST00000478616 HSPG2P98160 4391 aa12.83□□□□□ -0.36
SREBF1-212ENST00000478616 FBLL1A6NHQ2 334 aaKnown RBP12.82□□□□□ -0.36
SREBF1-212ENST00000478616 K7EQM0 130 aa12.82□□□□□ -0.36
SREBF1-212ENST00000478616 IFNA7P01567 189 aa12.82□□□□□ -0.36
SREBF1-212ENST00000478616 TRGV4A0A0C4DH28 118 aa12.81□□□□□ -0.36
SREBF1-212ENST00000478616 RS1O15537 224 aa12.81□□□□□ -0.36
SREBF1-212ENST00000478616 TPT1P13693 172 aaKnown RBP12.81□□□□□ -0.36
SREBF1-212ENST00000478616 GATA1P15976 413 aaPredicted RBP12.81□□□□□ -0.36
SREBF1-212ENST00000478616 EIF5AP63241 154 aaKnown RBP12.81□□□□□ -0.36
SREBF1-212ENST00000478616 SLAQ13239 276 aa12.81□□□□□ -0.36
SREBF1-212ENST00000478616 SAPCD1Q5SSQ6 148 aa12.81□□□□□ -0.36
SREBF1-212ENST00000478616 CFAP126Q5VTH2 177 aa12.81□□□□□ -0.36
SREBF1-212ENST00000478616 HIST1H2BAQ96A08 127 aa12.81□□□□□ -0.36
SREBF1-212ENST00000478616 GYPEP15421 78 aa12.8□□□□□ -0.36
SREBF1-212ENST00000478616 ZNF506Q5JVG8 444 aa12.8□□□□□ -0.36
SREBF1-212ENST00000478616 Q6ZRN7 208 aaPredicted RBP12.8□□□□□ -0.36
SREBF1-212ENST00000478616 SLC51BQ86UW2 128 aa12.8□□□□□ -0.36
SREBF1-212ENST00000478616 OR4C5Q8NGB2 326 aa12.8□□□□□ -0.36
SREBF1-212ENST00000478616 PTH2Q96A98 100 aa12.8□□□□□ -0.36
SREBF1-212ENST00000478616 KRTAP17-1Q9BYP8 105 aa12.8□□□□□ -0.36
SREBF1-212ENST00000478616 TRBV6-1A0A0K0K1D8 114 aa12.79□□□□□ -0.36
SREBF1-212ENST00000478616 C9JCJ5 164 aa12.79□□□□□ -0.36
SREBF1-212ENST00000478616 PAGE4O60829 102 aa12.79□□□□□ -0.36
SREBF1-212ENST00000478616 NXPH4O95158 308 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms