RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 LENEPQ9Y5L5 61 aa4.92□□□□□ -1.62
BRCA1-215ENST00000478531 IGHV1OR15-1A0A075B7D0 117 aa4.91□□□□□ -1.62
BRCA1-215ENST00000478531 TRAV10A0A0B4J240 114 aa4.91□□□□□ -1.62
BRCA1-215ENST00000478531 LYRM9A8MSI8 78 aa4.91□□□□□ -1.62
BRCA1-215ENST00000478531 IGLL5B9A064 214 aa4.91□□□□□ -1.62
BRCA1-215ENST00000478531 C11orf94C9JXX5 98 aa4.91□□□□□ -1.62
BRCA1-215ENST00000478531 IGLV2-11P01706 119 aa4.91□□□□□ -1.62
BRCA1-215ENST00000478531 PPT1P50897 306 aa4.91□□□□□ -1.62
BRCA1-215ENST00000478531 UBE2G1P62253 170 aa4.91□□□□□ -1.62
BRCA1-215ENST00000478531 S100A12P80511 92 aa4.91□□□□□ -1.62
BRCA1-215ENST00000478531 Q86TA4 180 aa4.91□□□□□ -1.62
BRCA1-215ENST00000478531 EIF4E3Q8N5X7 224 aaKnown RBP4.91□□□□□ -1.62
BRCA1-215ENST00000478531 ZNF680Q8NEM1 530 aa4.91□□□□□ -1.62
BRCA1-215ENST00000478531 C2CD4CQ8TF44 421 aa4.91□□□□□ -1.62
BRCA1-215ENST00000478531 GSN-AS1Q9NRJ2 163 aa4.91□□□□□ -1.62
BRCA1-215ENST00000478531 HYDINQ4G0P3 5121 aa4.91□□□□□ -1.62
BRCA1-215ENST00000478531 TEX46H3BTG2 121 aa4.91□□□□□ -1.62
BRCA1-215ENST00000478531 AKR1C3P42330 323 aa4.91□□□□□ -1.62
BRCA1-215ENST00000478531 CCL20P78556 96 aa4.91□□□□□ -1.62
BRCA1-215ENST00000478531 Q6AWC8 147 aa4.91□□□□□ -1.62
BRCA1-215ENST00000478531 FAM159AQ6UWV7 190 aa4.91□□□□□ -1.62
BRCA1-215ENST00000478531 HIST1H2BAQ96A08 127 aa4.91□□□□□ -1.62
BRCA1-215ENST00000478531 MANBALQ9NQG1 85 aa4.91□□□□□ -1.62
BRCA1-215ENST00000478531 ARL2-SNX15V9GYD0 113 aa4.91□□□□□ -1.62
BRCA1-215ENST00000478531 VPS13DQ5THJ4 4388 aa4.9□□□□□ -1.62
BRCA1-215ENST00000478531 TRAV21A0A0B4J279 112 aa4.9□□□□□ -1.63
BRCA1-215ENST00000478531 SCO2A0A1W2PP80 73 aa4.9□□□□□ -1.63
BRCA1-215ENST00000478531 EREGO14944 169 aa4.9□□□□□ -1.63
BRCA1-215ENST00000478531 GCGP01275 180 aa4.9□□□□□ -1.63
BRCA1-215ENST00000478531 TMEM183BQ1AE95 376 aa4.9□□□□□ -1.63
BRCA1-215ENST00000478531 SAPCD1Q5SSQ6 148 aa4.9□□□□□ -1.63
BRCA1-215ENST00000478531 TMEM183AQ8IXX5 376 aa4.9□□□□□ -1.63
BRCA1-215ENST00000478531 C11orf72Q8NBR9 251 aa4.9□□□□□ -1.63
BRCA1-215ENST00000478531 MUC4Q99102 2169 aa4.9□□□□□ -1.63
BRCA1-215ENST00000478531 IGHV4-4A0A075B6R2 117 aa4.89□□□□□ -1.63
BRCA1-215ENST00000478531 TRGV1A0A0A0MS02 117 aa4.89□□□□□ -1.63
BRCA1-215ENST00000478531 GAGE12BA1L429 117 aa4.89□□□□□ -1.63
BRCA1-215ENST00000478531 GAGE7O76087 117 aa4.89□□□□□ -1.63
BRCA1-215ENST00000478531 GAGE12FP0CL80 117 aa4.89□□□□□ -1.63
BRCA1-215ENST00000478531 GAGE12GP0CL81 117 aa4.89□□□□□ -1.63
BRCA1-215ENST00000478531 GAGE12IP0CL82 117 aa4.89□□□□□ -1.63
BRCA1-215ENST00000478531 ZNF80P51504 273 aaPredicted RBP4.89□□□□□ -1.63
BRCA1-215ENST00000478531 ZNF415Q09FC8 603 aa4.89□□□□□ -1.63
BRCA1-215ENST00000478531 ANXA2RQ3ZCQ2 193 aa4.89□□□□□ -1.63
BRCA1-215ENST00000478531 Q6ZTI0 123 aa4.89□□□□□ -1.63
BRCA1-215ENST00000478531 NHLRC2Q8NBF2 726 aa4.89□□□□□ -1.63
BRCA1-215ENST00000478531 FMC1Q96HJ9 113 aa4.89□□□□□ -1.63
BRCA1-215ENST00000478531 LINC00467Q9BRT7 94 aa4.89□□□□□ -1.63
BRCA1-215ENST00000478531 TCEAL7Q9BRU2 100 aa4.89□□□□□ -1.63
BRCA1-215ENST00000478531 KLF12Q9Y4X4 402 aa4.89□□□□□ -1.63
BRCA1-215ENST00000478531 TRAV1-1A0A0B4J248 108 aa4.89□□□□□ -1.63
BRCA1-215ENST00000478531 FBLL1A6NHQ2 334 aaKnown RBP4.89□□□□□ -1.63
BRCA1-215ENST00000478531 H0Y8G0 127 aa4.89□□□□□ -1.63
BRCA1-215ENST00000478531 IFNA1P01562 189 aa4.89□□□□□ -1.63
BRCA1-215ENST00000478531 PFN1P07737 140 aaKnown RBP4.89□□□□□ -1.63
BRCA1-215ENST00000478531 TCL1AP56279 114 aa4.89□□□□□ -1.63
BRCA1-215ENST00000478531 RAB14P61106 215 aa4.89□□□□□ -1.63
BRCA1-215ENST00000478531 MDFICQ9P1T7 246 aa4.89□□□□□ -1.63
BRCA1-215ENST00000478531 NACAE9PAV3 2078 aa4.88□□□□□ -1.63
BRCA1-215ENST00000478531 TRGV11A0A075B6L2 103 aa4.88□□□□□ -1.63
BRCA1-215ENST00000478531 TRGV2A0A075B6R0 118 aa4.88□□□□□ -1.63
BRCA1-215ENST00000478531 LCE6AA0A183 80 aa4.88□□□□□ -1.63
BRCA1-215ENST00000478531 F5H768 121 aa4.88□□□□□ -1.63
BRCA1-215ENST00000478531 GNRH2O43555 120 aa4.88□□□□□ -1.63
BRCA1-215ENST00000478531 LY6G6CO95867 125 aa4.88□□□□□ -1.63
BRCA1-215ENST00000478531 TYMSP04818 313 aa4.88□□□□□ -1.63
BRCA1-215ENST00000478531 ATP5G1P05496 136 aa4.88□□□□□ -1.63
BRCA1-215ENST00000478531 IBA57Q5T440 356 aaKnown RBP4.88□□□□□ -1.63
BRCA1-215ENST00000478531 ZC2HC1AQ96GY0 325 aa4.88□□□□□ -1.63
BRCA1-215ENST00000478531 SDF2L1Q9HCN8 221 aa4.88□□□□□ -1.63
BRCA1-215ENST00000478531 MRPL16Q9NX20 251 aaKnown RBP4.88□□□□□ -1.63
BRCA1-215ENST00000478531 DNAH6Q9C0G6 4158 aa4.88□□□□□ -1.63
BRCA1-215ENST00000478531 LTAP01374 205 aa4.87□□□□□ -1.63
BRCA1-215ENST00000478531 BCL2P10415 239 aa4.87□□□□□ -1.63
BRCA1-215ENST00000478531 MEF2BQ02080 365 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-215ENST00000478531 DAZ2Q13117 558 aaKnown RBP4.87□□□□□ -1.63
BRCA1-215ENST00000478531 TDRG1Q3Y452 100 aa4.87□□□□□ -1.63
BRCA1-215ENST00000478531 TMEM88Q6PEY1 159 aa4.87□□□□□ -1.63
BRCA1-215ENST00000478531 LINC00476Q8WZB0 136 aa4.87□□□□□ -1.63
BRCA1-215ENST00000478531 NDUFAF3Q9BU61 184 aa4.87□□□□□ -1.63
BRCA1-215ENST00000478531 DERL1Q9BUN8 251 aa4.87□□□□□ -1.63
BRCA1-215ENST00000478531 C11orf21Q9P2W6 132 aa4.87□□□□□ -1.63
BRCA1-215ENST00000478531 M0R036 132 aa4.87□□□□□ -1.63
BRCA1-215ENST00000478531 SPINK4O60575 86 aa4.87□□□□□ -1.63
BRCA1-215ENST00000478531 IGHV3-53P01767 116 aa4.87□□□□□ -1.63
BRCA1-215ENST00000478531 RPL35P42766 123 aaKnown RBP4.87□□□□□ -1.63
BRCA1-215ENST00000478531 BLOC1S1P78537 153 aa4.87□□□□□ -1.63
BRCA1-215ENST00000478531 OR5I1Q13606 314 aa4.87□□□□□ -1.63
BRCA1-215ENST00000478531 FAM162BQ5T6X4 162 aa4.87□□□□□ -1.63
BRCA1-215ENST00000478531 KCNS1Q96KK3 526 aa4.87□□□□□ -1.63
BRCA1-215ENST00000478531 APLNQ9ULZ1 77 aa4.87□□□□□ -1.63
BRCA1-215ENST00000478531 ZFP30Q9Y2G7 519 aa4.87□□□□□ -1.63
BRCA1-215ENST00000478531 FRAS1Q86XX4 4008 aa4.86□□□□□ -1.63
BRCA1-215ENST00000478531 IGHV3-16A0A0C4DH30 117 aa4.86□□□□□ -1.63
BRCA1-215ENST00000478531 FABP5P3A8MUU1 101 aa4.86□□□□□ -1.63
BRCA1-215ENST00000478531 SH2D1AO60880 128 aa4.86□□□□□ -1.63
BRCA1-215ENST00000478531 ORM1P02763 201 aa4.86□□□□□ -1.63
BRCA1-215ENST00000478531 NDUFA5Q16718 116 aa4.86□□□□□ -1.63
BRCA1-215ENST00000478531 PRR27Q6MZM9 219 aa4.86□□□□□ -1.63
BRCA1-215ENST00000478531 LINC00612Q8N6U2 182 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms